RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 C10orf142B7Z368 130 aa16.2■□□□□ 0.18
CHMP4A-204ENST00000530996 K7ERQ8 282 aa16.2■□□□□ 0.18
CHMP4A-204ENST00000530996 PES1O00541 588 aaKnown RBP16.2■□□□□ 0.18
CHMP4A-204ENST00000530996 SIGLEC6O43699 453 aa16.2■□□□□ 0.18
CHMP4A-204ENST00000530996 ENDOD1O94919 500 aa16.2■□□□□ 0.18
CHMP4A-204ENST00000530996 PRNPP04156 253 aa16.2■□□□□ 0.18
CHMP4A-204ENST00000530996 CTSLP07711 333 aa16.2■□□□□ 0.18
CHMP4A-204ENST00000530996 ITPKBP27987 946 aa16.2■□□□□ 0.18
CHMP4A-204ENST00000530996 CHRNA3P32297 505 aa16.2■□□□□ 0.18
CHMP4A-204ENST00000530996 VASPP50552 380 aaPredicted RBP16.2■□□□□ 0.18
CHMP4A-204ENST00000530996 DEUP1Q05D60 604 aa16.2■□□□□ 0.18
CHMP4A-204ENST00000530996 CAMK4Q16566 473 aa16.2■□□□□ 0.18
CHMP4A-204ENST00000530996 ALFQ53S48 1182 aa16.2■□□□□ 0.18
CHMP4A-204ENST00000530996 BRMS1LQ5PSV4 323 aa16.2■□□□□ 0.18
CHMP4A-204ENST00000530996 FAM102AQ5T9C2 384 aaPredicted RBP16.2■□□□□ 0.18
CHMP4A-204ENST00000530996 PIP5KL1Q5T9C9 394 aa16.2■□□□□ 0.18
CHMP4A-204ENST00000530996 C22orf39Q6P5X5 142 aa16.2■□□□□ 0.18
CHMP4A-204ENST00000530996 KDM7AQ6ZMT4 941 aa16.2■□□□□ 0.18
CHMP4A-204ENST00000530996 PTAR1Q7Z6K3 402 aaPredicted RBP16.2■□□□□ 0.18
CHMP4A-204ENST00000530996 SLC47A2Q86VL8 602 aa16.2■□□□□ 0.18
CHMP4A-204ENST00000530996 DCAF4L2Q8NA75 395 aa16.2■□□□□ 0.18
CHMP4A-204ENST00000530996 NRSN2Q9GZP1 204 aa16.2■□□□□ 0.18
CHMP4A-204ENST00000530996 TNKS2Q9H2K2 1166 aa16.2■□□□□ 0.18
CHMP4A-204ENST00000530996 RRN3Q9NYV6 651 aa16.2■□□□□ 0.18
CHMP4A-204ENST00000530996 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.2■□□□□ 0.18
CHMP4A-204ENST00000530996 DNAJC12Q9UKB3 198 aa16.2■□□□□ 0.18
CHMP4A-204ENST00000530996 AJAP1Q9UKB5 411 aaPredicted RBP16.2■□□□□ 0.18
CHMP4A-204ENST00000530996 CLCA2Q9UQC9 943 aa16.2■□□□□ 0.18
CHMP4A-204ENST00000530996 TBC1D30Q9Y2I9 924 aa16.2■□□□□ 0.18
CHMP4A-204ENST00000530996 OR51B4Q9Y5P0 310 aa16.2■□□□□ 0.18
CHMP4A-204ENST00000530996 SNX10Q9Y5X0 201 aa16.2■□□□□ 0.18
CHMP4A-204ENST00000530996 TP53BP1Q12888 1972 aaPredicted RBP16.2■□□□□ 0.18
CHMP4A-204ENST00000530996 GTPBP10A4D1E9 387 aaKnown RBP16.19■□□□□ 0.18
CHMP4A-204ENST00000530996 TLX3O43711 291 aaPredicted RBP16.19■□□□□ 0.18
CHMP4A-204ENST00000530996 BRINP1O60477 761 aa16.19■□□□□ 0.18
CHMP4A-204ENST00000530996 MT-CO1P00395 513 aa16.19■□□□□ 0.18
CHMP4A-204ENST00000530996 ALPPL2P10696 532 aa16.19■□□□□ 0.18
CHMP4A-204ENST00000530996 TFE3P19532 575 aaPredicted RBP16.19■□□□□ 0.18
CHMP4A-204ENST00000530996 HNRNPA2B1P22626 353 aaKnown RBP16.19■□□□□ 0.18
CHMP4A-204ENST00000530996 PON1P27169 355 aa16.19■□□□□ 0.18
CHMP4A-204ENST00000530996 DNA2P51530 1060 aa16.19■□□□□ 0.18
CHMP4A-204ENST00000530996 TAS2R38P59533 333 aa16.19■□□□□ 0.18
CHMP4A-204ENST00000530996 PROX2Q3B8N5 592 aa16.19■□□□□ 0.18
CHMP4A-204ENST00000530996 OTUD1Q5VV17 481 aaPredicted RBP16.19■□□□□ 0.18
CHMP4A-204ENST00000530996 KANSL1Q7Z3B3 1105 aa16.19■□□□□ 0.18
CHMP4A-204ENST00000530996 TMC6Q7Z403 805 aa16.19■□□□□ 0.18
CHMP4A-204ENST00000530996 HORMAD1Q86X24 394 aa16.19■□□□□ 0.18
CHMP4A-204ENST00000530996 ZDHHC17Q8IUH5 632 aa16.19■□□□□ 0.18
CHMP4A-204ENST00000530996 OR13H1Q8NG92 308 aa16.19■□□□□ 0.18
CHMP4A-204ENST00000530996 ARRDC3Q96B67 414 aa16.19■□□□□ 0.18
CHMP4A-204ENST00000530996 UBL7Q96S82 380 aaPredicted RBP16.19■□□□□ 0.18
CHMP4A-204ENST00000530996 PSMB7Q99436 277 aa16.19■□□□□ 0.18
CHMP4A-204ENST00000530996 MPP6Q9NZW5 540 aa16.19■□□□□ 0.18
CHMP4A-204ENST00000530996 IL36AQ9UHA7 158 aa16.19■□□□□ 0.18
CHMP4A-204ENST00000530996 FASNP49327 2511 aaKnown RBP16.19■□□□□ 0.18
CHMP4A-204ENST00000530996 GOLGA4Q13439 2230 aaKnown RBP16.18■□□□□ 0.18
CHMP4A-204ENST00000530996 GOLGA8SH3BPF8 625 aa16.18■□□□□ 0.18
CHMP4A-204ENST00000530996 TRIM38O00635 465 aa16.18■□□□□ 0.18
CHMP4A-204ENST00000530996 PRKCSHP14314 528 aaPredicted RBP16.18■□□□□ 0.18
CHMP4A-204ENST00000530996 ACP1P24666 158 aa16.18■□□□□ 0.18
CHMP4A-204ENST00000530996 OR1E1P30953 314 aa16.18■□□□□ 0.18
CHMP4A-204ENST00000530996 EIF2S3P41091 472 aaKnown RBP16.18■□□□□ 0.18
CHMP4A-204ENST00000530996 CLCN6P51797 869 aa16.18■□□□□ 0.18
CHMP4A-204ENST00000530996 CLDN2P57739 230 aa16.18■□□□□ 0.18
CHMP4A-204ENST00000530996 KCNMA1Q12791 1236 aa16.18■□□□□ 0.18
CHMP4A-204ENST00000530996 MAPK8IP2Q13387 824 aaPredicted RBP16.18■□□□□ 0.18
CHMP4A-204ENST00000530996 ZNF211Q13398 564 aaPredicted RBP16.18■□□□□ 0.18
CHMP4A-204ENST00000530996 TAF3Q5VWG9 929 aa16.18■□□□□ 0.18
CHMP4A-204ENST00000530996 ERN2Q76MJ5 926 aaKnown RBP16.18■□□□□ 0.18
CHMP4A-204ENST00000530996 SETD3Q86TU7 594 aaPredicted RBP16.18■□□□□ 0.18
CHMP4A-204ENST00000530996 TMEM145Q8NBT3 493 aa16.18■□□□□ 0.18
CHMP4A-204ENST00000530996 CHST14Q8NCH0 376 aa16.18■□□□□ 0.18
CHMP4A-204ENST00000530996 TMEM35BQ8NCS4 154 aa16.18■□□□□ 0.18
CHMP4A-204ENST00000530996 MSANTD4Q8NCY6 345 aa16.18■□□□□ 0.18
CHMP4A-204ENST00000530996 ZNF397Q8NF99 534 aaPredicted RBP16.18■□□□□ 0.18
CHMP4A-204ENST00000530996 OR2A12Q8NGT7 310 aa16.18■□□□□ 0.18
CHMP4A-204ENST00000530996 FCRL3Q96P31 734 aaPredicted RBP16.18■□□□□ 0.18
CHMP4A-204ENST00000530996 TBCBQ99426 244 aa16.18■□□□□ 0.18
CHMP4A-204ENST00000530996 SPON2Q9BUD6 331 aa16.18■□□□□ 0.18
CHMP4A-204ENST00000530996 UCKL1Q9NWZ5 548 aa16.18■□□□□ 0.18
CHMP4A-204ENST00000530996 DNAJC28Q9NX36 388 aa16.18■□□□□ 0.18
CHMP4A-204ENST00000530996 ARHGEF38Q9NXL2 777 aa16.18■□□□□ 0.18
CHMP4A-204ENST00000530996 A0A0D9SEW6 157 aa16.17■□□□□ 0.18
CHMP4A-204ENST00000530996 A6NNZ2 444 aa16.17■□□□□ 0.18
CHMP4A-204ENST00000530996 SMAD6O43541 496 aaKnown RBP16.17■□□□□ 0.18
CHMP4A-204ENST00000530996 SRGAP2O75044 1071 aa16.17■□□□□ 0.18
CHMP4A-204ENST00000530996 F9P00740 461 aa16.17■□□□□ 0.18
CHMP4A-204ENST00000530996 DGKAP23743 735 aa16.17■□□□□ 0.18
CHMP4A-204ENST00000530996 ACTN2P35609 894 aa16.17■□□□□ 0.18
CHMP4A-204ENST00000530996 CXCR3P49682 368 aa16.17■□□□□ 0.18
CHMP4A-204ENST00000530996 NEK3P51956 506 aa16.17■□□□□ 0.18
CHMP4A-204ENST00000530996 BPIFB4P59827 614 aa16.17■□□□□ 0.18
CHMP4A-204ENST00000530996 INSM1Q01101 510 aaPredicted RBP16.17■□□□□ 0.18
CHMP4A-204ENST00000530996 CCDC173Q0VFZ6 552 aa16.17■□□□□ 0.18
CHMP4A-204ENST00000530996 RTP5Q14D33 572 aa16.17■□□□□ 0.18
CHMP4A-204ENST00000530996 ZNF284Q2VY69 593 aa16.17■□□□□ 0.18
CHMP4A-204ENST00000530996 SEL1L3Q68CR1 1132 aa16.17■□□□□ 0.18
CHMP4A-204ENST00000530996 FAM114A1Q8IWE2 563 aa16.17■□□□□ 0.18
CHMP4A-204ENST00000530996 TMIEQ8NEW7 156 aa16.17■□□□□ 0.18
CHMP4A-204ENST00000530996 OR7D4Q8NG98 312 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms