RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 YBEYP58557 167 aaPredicted RBP12.13□□□□□ -0.47
LTBP3-219ENST00000530990 BYSLQ13895 437 aaKnown RBP12.13□□□□□ -0.47
LTBP3-219ENST00000530990 KRT81Q14533 505 aa12.13□□□□□ -0.47
LTBP3-219ENST00000530990 ELAVL3Q14576 367 aaKnown RBP12.13□□□□□ -0.47
LTBP3-219ENST00000530990 ELF2Q15723 593 aa12.13□□□□□ -0.47
LTBP3-219ENST00000530990 PARP15Q460N3 678 aa12.13□□□□□ -0.47
LTBP3-219ENST00000530990 LAIR1Q6GTX8 287 aa12.13□□□□□ -0.47
LTBP3-219ENST00000530990 LEKR1Q6ZMV7 388 aa12.13□□□□□ -0.47
LTBP3-219ENST00000530990 METTL3Q86U44 580 aaKnown RBP12.13□□□□□ -0.47
LTBP3-219ENST00000530990 ZNF354CQ86Y25 554 aa12.13□□□□□ -0.47
LTBP3-219ENST00000530990 MMAAQ8IVH4 418 aaKnown RBP12.13□□□□□ -0.47
LTBP3-219ENST00000530990 ARHGAP12Q8IWW6 846 aa12.13□□□□□ -0.47
LTBP3-219ENST00000530990 TSC1Q92574 1164 aa12.13□□□□□ -0.47
LTBP3-219ENST00000530990 ZC3H10Q96K80 434 aaKnown RBP12.13□□□□□ -0.47
LTBP3-219ENST00000530990 CSPG4P5Q96PW8 444 aa12.13□□□□□ -0.47
LTBP3-219ENST00000530990 TNKS2Q9H2K2 1166 aa12.13□□□□□ -0.47
LTBP3-219ENST00000530990 GOLPH3Q9H4A6 298 aa12.13□□□□□ -0.47
LTBP3-219ENST00000530990 LRRC19Q9H756 370 aa12.13□□□□□ -0.47
LTBP3-219ENST00000530990 LUC7LQ9NQ29 371 aaKnown RBP12.13□□□□□ -0.47
LTBP3-219ENST00000530990 NCDNQ9UBB6 729 aa12.13□□□□□ -0.47
LTBP3-219ENST00000530990 GMEB2Q9UKD1 530 aa12.13□□□□□ -0.47
LTBP3-219ENST00000530990 FCF1Q9Y324 198 aaKnown RBP12.13□□□□□ -0.47
LTBP3-219ENST00000530990 HYOU1Q9Y4L1 999 aa12.13□□□□□ -0.47
LTBP3-219ENST00000530990 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.12□□□□□ -0.47
LTBP3-219ENST00000530990 A0A0A6YYK5 440 aaPredicted RBP12.12□□□□□ -0.47
LTBP3-219ENST00000530990 GOLGA6L3A6NEY3 463 aa12.12□□□□□ -0.47
LTBP3-219ENST00000530990 KDELR3O43731 214 aa12.12□□□□□ -0.47
LTBP3-219ENST00000530990 BUB1BO60566 1050 aaPredicted RBP12.12□□□□□ -0.47
LTBP3-219ENST00000530990 IGLV3-19P01714 112 aa12.12□□□□□ -0.47
LTBP3-219ENST00000530990 DNTTP04053 509 aa12.12□□□□□ -0.47
LTBP3-219ENST00000530990 AMPD1P23109 780 aa12.12□□□□□ -0.47
LTBP3-219ENST00000530990 NOP2P46087 812 aaKnown RBP12.12□□□□□ -0.47
LTBP3-219ENST00000530990 NDST2P52849 883 aa12.12□□□□□ -0.47
LTBP3-219ENST00000530990 METAP1P53582 386 aa12.12□□□□□ -0.47
LTBP3-219ENST00000530990 HADHBP55084 474 aaKnown RBP12.12□□□□□ -0.47
LTBP3-219ENST00000530990 GSDMDP57764 484 aa12.12□□□□□ -0.47
LTBP3-219ENST00000530990 MMRN1Q13201 1228 aa12.12□□□□□ -0.47
LTBP3-219ENST00000530990 SERINC3Q13530 473 aa12.12□□□□□ -0.47
LTBP3-219ENST00000530990 DPYSL3Q14195 570 aa12.12□□□□□ -0.47
LTBP3-219ENST00000530990 CST6Q15828 149 aa12.12□□□□□ -0.47
LTBP3-219ENST00000530990 TTC31Q49AM3 519 aaPredicted RBP12.12□□□□□ -0.47
LTBP3-219ENST00000530990 AFMIDQ63HM1 303 aa12.12□□□□□ -0.47
LTBP3-219ENST00000530990 FAM124AQ86V42 546 aa12.12□□□□□ -0.47
LTBP3-219ENST00000530990 C11orf74Q86VG3 221 aa12.12□□□□□ -0.47
LTBP3-219ENST00000530990 TP53INP2Q8IXH6 220 aa12.12□□□□□ -0.47
LTBP3-219ENST00000530990 TMEFF1Q8IYR6 380 aa12.12□□□□□ -0.47
LTBP3-219ENST00000530990 FAM71BQ8TC56 605 aa12.12□□□□□ -0.47
LTBP3-219ENST00000530990 OR8D1Q8WZ84 308 aa12.12□□□□□ -0.47
LTBP3-219ENST00000530990 FAM129BQ96TA1 746 aa12.12□□□□□ -0.47
LTBP3-219ENST00000530990 HINFPQ9BQA5 517 aa12.12□□□□□ -0.47
LTBP3-219ENST00000530990 DESI2Q9BSY9 194 aa12.12□□□□□ -0.47
LTBP3-219ENST00000530990 SLC39A8Q9C0K1 460 aa12.12□□□□□ -0.47
LTBP3-219ENST00000530990 PABPC3Q9H361 631 aaKnown RBP12.12□□□□□ -0.47
LTBP3-219ENST00000530990 ITM2CQ9NQX7 267 aa12.12□□□□□ -0.47
LTBP3-219ENST00000530990 ETNK2Q9NVF9 386 aa12.12□□□□□ -0.47
LTBP3-219ENST00000530990 SERGEFQ9UGK8 458 aa12.12□□□□□ -0.47
LTBP3-219ENST00000530990 SALL4Q9UJQ4 1053 aa12.12□□□□□ -0.47
LTBP3-219ENST00000530990 HPCAL4Q9UM19 191 aa12.12□□□□□ -0.47
LTBP3-219ENST00000530990 SDK1Q7Z5N4 2213 aa12.12□□□□□ -0.47
LTBP3-219ENST00000530990 OTOGLQ3ZCN5 2332 aa12.12□□□□□ -0.47
LTBP3-219ENST00000530990 GPR179Q6PRD1 2367 aa12.12□□□□□ -0.47
LTBP3-219ENST00000530990 TP53BP1Q12888 1972 aaPredicted RBP12.11□□□□□ -0.47
LTBP3-219ENST00000530990 PLXNA2O75051 1894 aa12.11□□□□□ -0.47
LTBP3-219ENST00000530990 CXorf51AA0A1B0GTR3 108 aa12.11□□□□□ -0.47
LTBP3-219ENST00000530990 MID1O15344 667 aa12.11□□□□□ -0.47
LTBP3-219ENST00000530990 MAP3K13O43283 966 aa12.11□□□□□ -0.47
LTBP3-219ENST00000530990 RNASEH1O60930 286 aaKnown RBP12.11□□□□□ -0.47
LTBP3-219ENST00000530990 ZNF821O75541 412 aaPredicted RBP12.11□□□□□ -0.47
LTBP3-219ENST00000530990 RHOBTB1O94844 696 aa12.11□□□□□ -0.47
LTBP3-219ENST00000530990 EPN2O95208 641 aa12.11□□□□□ -0.47
LTBP3-219ENST00000530990 KRT7P08729 469 aa12.11□□□□□ -0.47
LTBP3-219ENST00000530990 COMTP21964 271 aa12.11□□□□□ -0.47
LTBP3-219ENST00000530990 CD6P30203 668 aa12.11□□□□□ -0.47
LTBP3-219ENST00000530990 PAPOLAP51003 745 aaKnown RBP12.11□□□□□ -0.47
LTBP3-219ENST00000530990 VAV2P52735 878 aa12.11□□□□□ -0.47
LTBP3-219ENST00000530990 RPL6Q02878 288 aaKnown RBP12.11□□□□□ -0.47
LTBP3-219ENST00000530990 ZBTB16Q05516 673 aa12.11□□□□□ -0.47
LTBP3-219ENST00000530990 TMCO3Q6UWJ1 677 aa12.11□□□□□ -0.47
LTBP3-219ENST00000530990 SLC36A4Q6YBV0 504 aa12.11□□□□□ -0.47
LTBP3-219ENST00000530990 ARHGAP36Q6ZRI8 547 aa12.11□□□□□ -0.47
LTBP3-219ENST00000530990 ARMCX6Q7L4S7 300 aa12.11□□□□□ -0.47
LTBP3-219ENST00000530990 DCLK2Q8N568 766 aa12.11□□□□□ -0.47
LTBP3-219ENST00000530990 DEFB119Q8N690 84 aa12.11□□□□□ -0.47
LTBP3-219ENST00000530990 CHST14Q8NCH0 376 aa12.11□□□□□ -0.47
LTBP3-219ENST00000530990 OR2A12Q8NGT7 310 aa12.11□□□□□ -0.47
LTBP3-219ENST00000530990 RUBCNQ92622 972 aa12.11□□□□□ -0.47
LTBP3-219ENST00000530990 TOE1Q96GM8 510 aaKnown RBP12.11□□□□□ -0.47
LTBP3-219ENST00000530990 ZNF670Q9BS34 389 aa12.11□□□□□ -0.47
LTBP3-219ENST00000530990 CALN1Q9BXU9 219 aa12.11□□□□□ -0.47
LTBP3-219ENST00000530990 TM6SF2Q9BZW4 377 aa12.11□□□□□ -0.47
LTBP3-219ENST00000530990 CEP44Q9C0F1 390 aa12.11□□□□□ -0.47
LTBP3-219ENST00000530990 LACRTQ9GZZ8 138 aa12.11□□□□□ -0.47
LTBP3-219ENST00000530990 PDFQ9HBH1 243 aa12.11□□□□□ -0.47
LTBP3-219ENST00000530990 DONSONQ9NYP3 566 aa12.11□□□□□ -0.47
LTBP3-219ENST00000530990 RCOR3Q9P2K3 495 aaPredicted RBP12.11□□□□□ -0.47
LTBP3-219ENST00000530990 CFAP54Q96N23 3096 aa12.11□□□□□ -0.47
LTBP3-219ENST00000530990 A0A0U1RQJ8 604 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 A0A1W2PP55 124 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 LRRD1A4D1F6 860 aa12.1□□□□□ -0.47
LTBP3-219ENST00000530990 ZSCAN5CA6NGD5 496 aaPredicted RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms