RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 DYRK4Q9NR20 520 aa21.41■■□□□ 1.02
SMPD1-204ENST00000530395 GOLGA4Q13439 2230 aaKnown RBP21.41■■□□□ 1.02
SMPD1-204ENST00000530395 NBEAQ8NFP9 2946 aa21.41■■□□□ 1.02
SMPD1-204ENST00000530395 DOCK9Q9BZ29 2069 aa21.4■■□□□ 1.02
SMPD1-204ENST00000530395 IGLV3-10A0A075B6K4 115 aa21.4■■□□□ 1.02
SMPD1-204ENST00000530395 MT-CO1P00395 513 aa21.4■■□□□ 1.02
SMPD1-204ENST00000530395 MMEP08473 750 aa21.4■■□□□ 1.02
SMPD1-204ENST00000530395 EPHA8P29322 1005 aaPredicted RBP21.4■■□□□ 1.02
SMPD1-204ENST00000530395 OVGP1Q12889 678 aa21.4■■□□□ 1.02
SMPD1-204ENST00000530395 C2CD6Q53TS8 623 aa21.4■■□□□ 1.02
SMPD1-204ENST00000530395 ZNF783Q6ZMS7 281 aa21.4■■□□□ 1.02
SMPD1-204ENST00000530395 ARCQ7LC44 396 aa21.4■■□□□ 1.02
SMPD1-204ENST00000530395 IQCHQ86VS3 1027 aa21.4■■□□□ 1.02
SMPD1-204ENST00000530395 ENOX1Q8TC92 643 aaKnown RBP21.4■■□□□ 1.02
SMPD1-204ENST00000530395 SAP25Q8TEE9 199 aa21.4■■□□□ 1.02
SMPD1-204ENST00000530395 CFAP57Q96MR6 1250 aa21.4■■□□□ 1.02
SMPD1-204ENST00000530395 MPP6Q9NZW5 540 aa21.4■■□□□ 1.02
SMPD1-204ENST00000530395 ARHGAP20Q9P2F6 1191 aa21.4■■□□□ 1.02
SMPD1-204ENST00000530395 TMEM59LQ9UK28 342 aa21.4■■□□□ 1.02
SMPD1-204ENST00000530395 ACACAQ13085 2346 aa21.4■■□□□ 1.02
SMPD1-204ENST00000530395 KPNA3O00505 521 aaPredicted RBP21.39■■□□□ 1.01
SMPD1-204ENST00000530395 SRGAP2O75044 1071 aa21.39■■□□□ 1.01
SMPD1-204ENST00000530395 PRNPP04156 253 aa21.39■■□□□ 1.01
SMPD1-204ENST00000530395 CAPNS1P04632 268 aa21.39■■□□□ 1.01
SMPD1-204ENST00000530395 RRM1P23921 792 aa21.39■■□□□ 1.01
SMPD1-204ENST00000530395 CHRNA3P32297 505 aa21.39■■□□□ 1.01
SMPD1-204ENST00000530395 RECQLP46063 649 aaPredicted RBP21.39■■□□□ 1.01
SMPD1-204ENST00000530395 STAT4Q14765 748 aa21.39■■□□□ 1.01
SMPD1-204ENST00000530395 FKBP15Q5T1M5 1219 aa21.39■■□□□ 1.01
SMPD1-204ENST00000530395 TMIEQ8NEW7 156 aa21.39■■□□□ 1.01
SMPD1-204ENST00000530395 OR2A12Q8NGT7 310 aa21.39■■□□□ 1.01
SMPD1-204ENST00000530395 ZYG11BQ9C0D3 744 aa21.39■■□□□ 1.01
SMPD1-204ENST00000530395 VPS16Q9H269 839 aa21.39■■□□□ 1.01
SMPD1-204ENST00000530395 GANQ9H2C0 597 aa21.39■■□□□ 1.01
SMPD1-204ENST00000530395 METTL5Q9NRN9 209 aaKnown RBP21.39■■□□□ 1.01
SMPD1-204ENST00000530395 TMPRSS4Q9NRS4 437 aa21.39■■□□□ 1.01
SMPD1-204ENST00000530395 RALYQ9UKM9 306 aaKnown RBP21.39■■□□□ 1.01
SMPD1-204ENST00000530395 A0A0D9SEW6 157 aa21.38■■□□□ 1.01
SMPD1-204ENST00000530395 ILVBLA1L0T0 632 aa21.38■■□□□ 1.01
SMPD1-204ENST00000530395 PRAMEF26H0Y7S4 382 aa21.38■■□□□ 1.01
SMPD1-204ENST00000530395 ENC1O14682 589 aa21.38■■□□□ 1.01
SMPD1-204ENST00000530395 GFPT2O94808 682 aa21.38■■□□□ 1.01
SMPD1-204ENST00000530395 LDOC1O95751 146 aaPredicted RBP21.38■■□□□ 1.01
SMPD1-204ENST00000530395 CDR2Q01850 454 aa21.38■■□□□ 1.01
SMPD1-204ENST00000530395 SHBQ15464 509 aa21.38■■□□□ 1.01
SMPD1-204ENST00000530395 PIP5KL1Q5T9C9 394 aa21.38■■□□□ 1.01
SMPD1-204ENST00000530395 RETSATQ6NUM9 610 aa21.38■■□□□ 1.01
SMPD1-204ENST00000530395 NEK5Q6P3R8 708 aa21.38■■□□□ 1.01
SMPD1-204ENST00000530395 C22orf39Q6P5X5 142 aa21.38■■□□□ 1.01
SMPD1-204ENST00000530395 LINGO4Q6UY18 593 aa21.38■■□□□ 1.01
SMPD1-204ENST00000530395 BNIPLQ7Z465 357 aa21.38■■□□□ 1.01
SMPD1-204ENST00000530395 FAM131BQ86XD5 332 aa21.38■■□□□ 1.01
SMPD1-204ENST00000530395 CNDP2Q96KP4 475 aaKnown RBP21.38■■□□□ 1.01
SMPD1-204ENST00000530395 SPON2Q9BUD6 331 aa21.38■■□□□ 1.01
SMPD1-204ENST00000530395 NOCTQ9UK39 431 aaKnown RBP21.38■■□□□ 1.01
SMPD1-204ENST00000530395 DAAM1Q9Y4D1 1078 aa21.38■■□□□ 1.01
SMPD1-204ENST00000530395 PCDHGA1Q9Y5H4 931 aa21.38■■□□□ 1.01
SMPD1-204ENST00000530395 APC2O95996 2303 aa21.37■■□□□ 1.01
SMPD1-204ENST00000530395 K7ERQ8 282 aa21.37■■□□□ 1.01
SMPD1-204ENST00000530395 CBX4O00257 560 aa21.37■■□□□ 1.01
SMPD1-204ENST00000530395 TAF4O00268 1085 aa21.37■■□□□ 1.01
SMPD1-204ENST00000530395 RNGTTO60942 597 aaKnown RBP21.37■■□□□ 1.01
SMPD1-204ENST00000530395 CTSLP07711 333 aa21.37■■□□□ 1.01
SMPD1-204ENST00000530395 CDK4P11802 303 aa21.37■■□□□ 1.01
SMPD1-204ENST00000530395 RXRGP48443 463 aa21.37■■□□□ 1.01
SMPD1-204ENST00000530395 POLR2FP61218 127 aaKnown RBP21.37■■□□□ 1.01
SMPD1-204ENST00000530395 KRT31Q15323 416 aa21.37■■□□□ 1.01
SMPD1-204ENST00000530395 SMAD1Q15797 465 aaKnown RBP21.37■■□□□ 1.01
SMPD1-204ENST00000530395 ARL13BQ3SXY8 428 aa21.37■■□□□ 1.01
SMPD1-204ENST00000530395 CDKAL1Q5VV42 579 aa21.37■■□□□ 1.01
SMPD1-204ENST00000530395 TRNP1Q6NT89 227 aa21.37■■□□□ 1.01
SMPD1-204ENST00000530395 EID2Q8N6I1 236 aa21.37■■□□□ 1.01
SMPD1-204ENST00000530395 OR7D4Q8NG98 312 aa21.37■■□□□ 1.01
SMPD1-204ENST00000530395 SLC20A1Q8WUM9 679 aa21.37■■□□□ 1.01
SMPD1-204ENST00000530395 PPP1R16AQ96I34 528 aa21.37■■□□□ 1.01
SMPD1-204ENST00000530395 ATP13A1Q9HD20 1204 aa21.37■■□□□ 1.01
SMPD1-204ENST00000530395 FAM207AQ9NSI2 230 aaPredicted RBP21.37■■□□□ 1.01
SMPD1-204ENST00000530395 IL36AQ9UHA7 158 aa21.37■■□□□ 1.01
SMPD1-204ENST00000530395 SMAD6O43541 496 aaKnown RBP21.36■■□□□ 1.01
SMPD1-204ENST00000530395 MMP8P22894 467 aa21.36■■□□□ 1.01
SMPD1-204ENST00000530395 SDC4P31431 198 aa21.36■■□□□ 1.01
SMPD1-204ENST00000530395 ANP32AP39687 249 aaKnown RBP21.36■■□□□ 1.01
SMPD1-204ENST00000530395 TAS2R38P59533 333 aa21.36■■□□□ 1.01
SMPD1-204ENST00000530395 ATP11AP98196 1134 aa21.36■■□□□ 1.01
SMPD1-204ENST00000530395 SLC20A2Q08357 652 aa21.36■■□□□ 1.01
SMPD1-204ENST00000530395 DHRS13Q6UX07 377 aa21.36■■□□□ 1.01
SMPD1-204ENST00000530395 TRIM72Q6ZMU5 477 aa21.36■■□□□ 1.01
SMPD1-204ENST00000530395 CLEC17AQ6ZS10 378 aa21.36■■□□□ 1.01
SMPD1-204ENST00000530395 EMC1Q8N766 993 aa21.36■■□□□ 1.01
SMPD1-204ENST00000530395 MDM1Q8TC05 714 aa21.36■■□□□ 1.01
SMPD1-204ENST00000530395 GRIN3AQ8TCU5 1115 aa21.36■■□□□ 1.01
SMPD1-204ENST00000530395 CEP44Q9C0F1 390 aa21.36■■□□□ 1.01
SMPD1-204ENST00000530395 LMBRD1Q9NUN5 540 aa21.36■■□□□ 1.01
SMPD1-204ENST00000530395 PPARGC1AQ9UBK2 798 aaKnown RBP21.36■■□□□ 1.01
SMPD1-204ENST00000530395 CELSR3Q9NYQ7 3312 aa21.35■■□□□ 1.01
SMPD1-204ENST00000530395 A0A1W2PQU0 124 aa21.35■■□□□ 1.01
SMPD1-204ENST00000530395 RFPL3O75679 317 aa21.35■■□□□ 1.01
SMPD1-204ENST00000530395 ENDOD1O94919 500 aa21.35■■□□□ 1.01
SMPD1-204ENST00000530395 CYP1A1P04798 512 aaPredicted RBP21.35■■□□□ 1.01
SMPD1-204ENST00000530395 C1SP09871 688 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms