RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 KCNK16Q96T55 309 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 SYT11Q9BT88 431 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 APOL5Q9BWW9 433 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 EDEM3Q9BZQ6 932 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 BARX1Q9HBU1 254 aaPredicted RBP9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 ZNF334Q9HCZ1 680 aaPredicted RBP9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 DMAP1Q9NPF5 467 aaPredicted RBP9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 HCFC1R1Q9NWW0 138 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 CD207Q9UJ71 328 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 KIAA1257Q9ULG3 409 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 MYO6Q9UM54 1294 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 TCAF1Q9Y4C2 921 aa9.2□□□□□ -0.94
CCDC90B-217ENST00000530253 C2orf16Q68DN1 1984 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 CCDC195A0A1B0GUA6 201 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 LRRC53A6NM62 1247 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 MBTPS2O43462 519 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 MAFKO60675 156 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 TADA3O75528 432 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 GFPT2O94808 682 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 RECKO95980 971 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 CPP00450 1065 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 TPM3P06753 285 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 CYP11B1P15538 503 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 CHRNB2P17787 502 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 USP8P40818 1118 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 BCL6P41182 706 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 STAT1P42224 750 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 SELENOPP49908 381 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 BCAT1P54687 386 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 RPL10AP62906 217 aaKnown RBP9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 NTHL1P78549 312 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 ITIH3Q06033 890 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 PLD1Q13393 1074 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 STILQ15468 1287 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 LEXMQ3ZCV2 418 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 SPECC1LQ69YQ0 1117 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 DENND1BQ6P3S1 775 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 GPRIN1Q7Z2K8 1008 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 SCN4BQ8IWT1 228 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 ANKRD52Q8NB46 1076 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 ZNF606Q8WXB4 792 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 SMG7Q92540 1137 aaKnown RBP9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 PSMG2Q969U7 264 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 SPAG5Q96R06 1193 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 MED10Q9BTT4 135 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 TTLL2Q9BWV7 592 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 DUSP16Q9BY84 665 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 PNPLA8Q9NP80 782 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 IL37Q9NZH6 218 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 DNMT3BQ9UBC3 853 aaKnown RBP9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 CYTH4Q9UIA0 394 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 CAPN11Q9UMQ6 739 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 USP15Q9Y4E8 981 aaPredicted RBP9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 ATP8B3O60423 1300 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 NOTCH4Q99466 2003 aa9.19□□□□□ -0.94
CCDC90B-217ENST00000530253 WDFY4Q6ZS81 3184 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 FAM92AA1XBS5 289 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 SLC38A8A6NNN8 435 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 M0QYV0 167 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 THAP12O43422 761 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 CLUHO75153 1309 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 MOSPD3O75425 235 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 LRG1P02750 347 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 SETSIPP0DME0 302 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 CCR2P41597 374 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 PRKCIP41743 596 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 GPD2P43304 727 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 ALDH1A3P47895 512 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 RPL34P49207 117 aaKnown RBP9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 SLC5A3P53794 718 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 MAP3K7CLP57077 242 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 BST2Q10589 180 aaKnown RBP9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 CDSNQ15517 529 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 TESK1Q15569 626 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 SLC5A9Q2M3M2 681 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 EMC4Q5J8M3 183 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 STEAP3Q658P3 488 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 BHLHA9Q7RTU4 235 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 CACNA2D4Q7Z3S7 1137 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 IRF2BP2Q7Z5L9 587 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 GRASPQ7Z6J2 395 aaPredicted RBP9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 DNAJB7Q7Z6W7 309 aaPredicted RBP9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 TMEM150AQ86TG1 271 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 PIGZQ86VD9 579 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 KBTBD2Q8IY47 623 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 WDTC1Q8N5D0 677 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 SLC20A1Q8WUM9 679 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 SLC35F5Q8WV83 523 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 MBD6Q96DN6 1003 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 IQCDQ96DY2 449 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 NUP58Q9BVL2 599 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 UBXN6Q9BZV1 441 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 TRIM5Q9C035 493 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 DNAI2Q9GZS0 605 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 VPS11Q9H270 941 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 CD248Q9HCU0 757 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 AIPL1Q9NZN9 384 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 ASB3Q9Y575 518 aa9.18□□□□□ -0.94
CCDC90B-217ENST00000530253 GREB1Q4ZG55 1949 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms