RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, human

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-223	ENST00000529986	C2CD2L	O14523	706 aa		7.74	□□□□□ -1.17
CTNND1-223	ENST00000529986	ZC3H11A	O75152	810 aa	Known RBP eCLIP	7.74	□□□□□ -1.17
CTNND1-223	ENST00000529986	TRMU	O75648	421 aa	Known RBP	7.74	□□□□□ -1.17
CTNND1-223	ENST00000529986	OR6B1	O95007	311 aa		7.74	□□□□□ -1.17
CTNND1-223	ENST00000529986	MUT	P22033	750 aa		7.74	□□□□□ -1.17
CTNND1-223	ENST00000529986	FMO4	P31512	558 aa		7.74	□□□□□ -1.17
CTNND1-223	ENST00000529986	GRIA4	P48058	902 aa		7.74	□□□□□ -1.17
CTNND1-223	ENST00000529986	CDK7	P50613	346 aa		7.74	□□□□□ -1.17
CTNND1-223	ENST00000529986	POU5F1	Q01860	360 aa	Known RBP	7.74	□□□□□ -1.17
CTNND1-223	ENST00000529986	PFKFB4	Q16877	469 aa		7.74	□□□□□ -1.17
CTNND1-223	ENST00000529986	GCNT7	Q6ZNI0	430 aa		7.74	□□□□□ -1.17
CTNND1-223	ENST00000529986	LRRC17	Q8N6Y2	441 aa		7.74	□□□□□ -1.17
CTNND1-223	ENST00000529986	LPCAT1	Q8NF37	534 aa		7.74	□□□□□ -1.17
CTNND1-223	ENST00000529986	HASPIN	Q8TF76	798 aa		7.74	□□□□□ -1.17
CTNND1-223	ENST00000529986	SPOCK2	Q92563	424 aa		7.74	□□□□□ -1.17
CTNND1-223	ENST00000529986	ABCG8	Q9H221	673 aa		7.74	□□□□□ -1.17
CTNND1-223	ENST00000529986	GAN	Q9H2C0	597 aa		7.74	□□□□□ -1.17
CTNND1-223	ENST00000529986	PDGFC	Q9NRA1	345 aa		7.74	□□□□□ -1.17
CTNND1-223	ENST00000529986	IKZF3	Q9UKT9	509 aa		7.74	□□□□□ -1.17
CTNND1-223	ENST00000529986	CRTAM	O95727	393 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	CYP2C9	P11712	490 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	WARS	P23381	471 aa	Known RBP	7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	S100A3	P33764	101 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	GSTM5	P46439	218 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	EFEMP1	Q12805	493 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	TOP3A	Q13472	1001 aa	Predicted RBP	7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	BLMH	Q13867	455 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	TIMM50	Q3ZCQ8	353 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	FAM117B	Q6P1L5	589 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	OFCC1	Q8IZS5	231 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	LINC00116	Q8NCU8	138 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	OR56A4	Q8NGH8	313 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	S100Z	Q8WXG8	99 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	ART4	Q93070	314 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	GJD4	Q96KN9	370 aa	Predicted RBP	7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	CIB1	Q99828	191 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	ETNK2	Q9NVF9	386 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	ING4	Q9UNL4	249 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	GSTK1	Q9Y2Q3	226 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	PCDHGA3	Q9Y5H0	932 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	SRRM3	A6NNA2	597 aa	Predicted RBP	7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	EDF1	O60869	148 aa	Known RBP	7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	LSM8	O95777	96 aa	Known RBP	7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	ATP5B	P06576	529 aa	Known RBP	7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	STAG3L1	P0CL83	205 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	CXCL8	P10145	99 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	S100A1	P23297	94 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	RPS6KA3	P51812	740 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	TNK2	Q07912	1038 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	ZFP69	Q49AA0	526 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	PPP1R15B	Q5SWA1	713 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	ATAD3B	Q5T9A4	648 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	DUPD1	Q68J44	220 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	FAM9C	Q8IZT9	166 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	CYP2W1	Q8TAV3	490 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	COX4I2	Q96KJ9	171 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	TCF12	Q99081	682 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	ZFYVE28	Q9HCC9	887 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	FAM50B	Q9Y247	325 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	DYRK1B	Q9Y463	629 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	MAGEB16	A2A368	324 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	CD3EAP	O15446	510 aa	Known RBP	7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	AVIL	O75366	819 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	CST1	P01037	141 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	SERPINA6	P08185	405 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	ITGAL	P20701	1170 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	YWHAZ	P63104	245 aa	Known RBP	7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	DLG4	P78352	724 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	TRAP1	Q12931	704 aa	Known RBP	7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	PARP6	Q2NL67	630 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	KCNV1	Q6PIU1	500 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	KCNK18	Q7Z418	384 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	FBXO33	Q7Z6M2	555 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	ECHDC2	Q86YB7	292 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	APOBEC3F	Q8IUX4	373 aa	Known RBP	7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	PQLC1	Q8N2U9	271 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	CARNMT1	Q8N4J0	409 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	FITM2	Q8N6M3	262 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	OR52K1	Q8NGK4	314 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	MCFD2	Q8NI22	146 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	LNX1	Q8TBB1	728 aa	Predicted RBP	7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	ATG4C	Q96DT6	458 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	EPB41L4B	Q9H329	900 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	ELP3	Q9H9T3	547 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	S100A14	Q9HCY8	104 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	TSPAN16	Q9UKR8	245 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	TMCO1	Q9UM00	188 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	ANKRD6	Q9Y2G4	727 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986		F5H5T6	163 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	LOC110117498-PIK3R3	F6TDL0	507 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	CBX4	O00257	560 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	WFS1	O76024	890 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	KCNH1	O95259	989 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	FADS2	O95864	444 aa	Known RBP	7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	VTN	P04004	478 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	NFIC	P08651	508 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	NUDT17	P0C025	328 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	FDX1	P10109	184 aa		7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	HNRNPL	P14866	589 aa	Known RBP eCLIP	7.73	□□□□□ -1.17
CTNND1-223	ENST00000529986	PSMA3	P25788	255 aa		7.73	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms