RNA–Protein interactions for RNA: ENST00000529521.1

FDFT1-216, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 418 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-216ENST00000529521 SMG5Q9UPR3 1016 aaKnown RBP2.86□□□□□ -1.95
FDFT1-216ENST00000529521 DTX4Q9Y2E6 619 aa2.86□□□□□ -1.95
FDFT1-216ENST00000529521 RWDD3Q9Y3V2 267 aa2.86□□□□□ -1.95
FDFT1-216ENST00000529521 PCDHGB2Q9Y5G2 931 aa2.86□□□□□ -1.95
FDFT1-216ENST00000529521 NOX1Q9Y5S8 564 aa2.86□□□□□ -1.95
FDFT1-216ENST00000529521 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.86□□□□□ -1.95
FDFT1-216ENST00000529521 PRDM15P57071 1507 aaPredicted RBP2.86□□□□□ -1.95
FDFT1-216ENST00000529521 DISP1Q96F81 1524 aa2.86□□□□□ -1.95
FDFT1-216ENST00000529521 RAPGEF6Q8TEU7 1601 aa2.86□□□□□ -1.95
FDFT1-216ENST00000529521 ADCY10Q96PN6 1610 aa2.86□□□□□ -1.95
FDFT1-216ENST00000529521 ROBO2Q9HCK4 1378 aa2.86□□□□□ -1.95
FDFT1-216ENST00000529521 ADAMTS20P59510 1910 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 ADGBQ8N7X0 1667 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 ATP10BO94823 1461 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 GRIN2AQ12879 1464 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 WDR7Q9Y4E6 1490 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 MAGI3Q5TCQ9 1506 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 RNF103-CHMP3A0A140T963 221 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 A0A1B0GTQ1 180 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 A0A1B0GVG6 124 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 LOC390937A0A1W2PQ73 354 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 TMEM120BA0PK00 339 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 TYW5A2RUC4 315 aaKnown RBP2.85□□□□□ -1.95
FDFT1-216ENST00000529521 GSAPA4D1B5 854 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 BLACEA4D250 179 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 VWA3AA6NCI4 1184 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 TCAF2A6NFQ2 919 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 OR6C75A6NL08 312 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 IQCF5A8MTL0 148 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 FAM47E-STBD1D6RA91 191 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 GOLGA8KD6RF30 607 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 RNF103O00237 685 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 ETV2O00321 342 aaPredicted RBP2.85□□□□□ -1.95
FDFT1-216ENST00000529521 O00370 1275 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 SH2B2O14492 632 aaPredicted RBP2.85□□□□□ -1.95
FDFT1-216ENST00000529521 CXCL11O14625 94 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 PSMA7O14818 248 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 XPO1O14980 1071 aaKnown RBP2.85□□□□□ -1.95
FDFT1-216ENST00000529521 PGRMC2O15173 223 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 TO15178 435 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 OGTO15294 1046 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 GATCO43716 136 aaKnown RBP2.85□□□□□ -1.95
FDFT1-216ENST00000529521 SSX5O60225 188 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 ZNF862O60290 1169 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 PLA2G6O60733 806 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 PFDN1O60925 122 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 PHF2O75151 1096 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 SMIM24O75264 130 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 KRT37O76014 449 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 SEMA3DO95025 777 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 PRAMEF12O95522 483 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 MLYCDO95822 493 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 CRYZL1O95825 349 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 GAS8O95995 478 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 AFPP02771 609 aaKnown RBP2.85□□□□□ -1.95
FDFT1-216ENST00000529521 HMGCRP04035 888 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 IL6P05231 212 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 CLTAP09496 248 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 STAG3L3P0CL85 134 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 HSMCR30P0CW71 290 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 CYP2C9P11712 490 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 ODC1P11926 461 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 KRT3P12035 628 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 PRKCAP17252 672 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 POLR2CP19387 275 aaPredicted RBP2.85□□□□□ -1.95
FDFT1-216ENST00000529521 SLC9A1P19634 815 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 ITIH2P19823 946 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 TYMPP19971 482 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 PCSK1P29120 753 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 HLA-FP30511 346 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 LRPAP1P30533 357 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 SLC5A2P31639 672 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 GBP1P32455 592 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 NNMTP40261 264 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 PTPN9P43378 593 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 ALDH1A3P47895 512 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 NT5C2P49902 561 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 ZNF81P51508 661 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 HNRNPMP52272 730 aaKnown RBP eCLIP2.85□□□□□ -1.95
FDFT1-216ENST00000529521 SLC7A2P52569 658 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 ITGA8P53708 1063 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 MAPK10P53779 464 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 ATXN3P54252 364 aaPredicted RBP2.85□□□□□ -1.95
FDFT1-216ENST00000529521 NPEPPSP55786 919 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 LINC00310P59036 64 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 NLRP11P59045 1033 aaKnown RBP2.85□□□□□ -1.95
FDFT1-216ENST00000529521 CREB5Q02930 508 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 TLE2Q04725 743 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 SCRN3Q0VDG4 424 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 GPM6BQ13491 265 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 PUM1Q14671 1186 aaKnown RBP eCLIP2.85□□□□□ -1.952e-9■□□□□ 10.8
FDFT1-216ENST00000529521 RPS6KA2Q15349 733 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 CHRNA6Q15825 494 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 WHAMMP3Q1A5X7 153 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 SPATS1Q496A3 300 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 SLC9B1Q4ZJI4 515 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 FAM98BQ52LJ0 330 aaKnown RBP2.85□□□□□ -1.95
FDFT1-216ENST00000529521 PLEKHO1Q53GL0 409 aaPredicted RBP2.85□□□□□ -1.95
FDFT1-216ENST00000529521 FIGNQ5HY92 759 aa2.85□□□□□ -1.95
FDFT1-216ENST00000529521 FBXO47Q5MNV8 452 aa2.85□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms