RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 PLEKP08567 350 aaPredicted RBP9.29□□□□□ -0.92
CMTM1-210ENST00000528441 SRCP12931 536 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 GOT1P17174 413 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 EPHB2P29323 1055 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 ADRA1BP35368 520 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 PTPN9P43378 593 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 CSNK1EP49674 416 aaKnown RBP9.29□□□□□ -0.92
CMTM1-210ENST00000528441 PLK1P53350 603 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 TPI1P60174 286 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 GNA12Q03113 381 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 EIF4EBP2Q13542 120 aaPredicted RBP9.29□□□□□ -0.92
CMTM1-210ENST00000528441 POLD3Q15054 466 aaPredicted RBP9.29□□□□□ -0.92
CMTM1-210ENST00000528441 ZSCAN23Q3MJ62 389 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 CCDC157Q569K6 752 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 CFAP58Q5T655 872 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 TRNP1Q6NT89 227 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 C22orf39Q6P5X5 142 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 LAYNQ6UX15 382 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 MON1BQ7L1V2 547 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 TMC6Q7Z403 805 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 MCOLN2Q8IZK6 566 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 SH2D3CQ8N5H7 860 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 CCDC185Q8N715 623 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 OR2T34Q8NGX1 318 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 PTPRN2Q92932 1015 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 BIRC7Q96CA5 298 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 MYO19Q96H55 970 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 LMLNQ96KR4 655 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 C1orf74Q96LT6 269 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 NAP1L5Q96NT1 182 aaPredicted RBP9.29□□□□□ -0.92
CMTM1-210ENST00000528441 MYOCQ99972 504 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 NCAPGQ9BPX3 1015 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 ACE2Q9BYF1 805 aaPredicted RBP9.29□□□□□ -0.92
CMTM1-210ENST00000528441 TM6SF2Q9BZW4 377 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 ZDHHC5Q9C0B5 715 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 PCED1AQ9H1Q7 454 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 HSD3B7Q9H2F3 369 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 TSPY26PQ9H489 355 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 DHX35Q9H5Z1 703 aaKnown RBP9.29□□□□□ -0.92
CMTM1-210ENST00000528441 ZDHHC6Q9H6R6 413 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 GAREM1Q9H706 876 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 ANLNQ9NQW6 1124 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 IFNKQ9P0W0 207 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 PCSK1NQ9UHG2 260 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 FZD4Q9ULV1 537 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.29□□□□□ -0.92
CMTM1-210ENST00000528441 FCF1Q9Y324 198 aaKnown RBP9.29□□□□□ -0.92
CMTM1-210ENST00000528441 SCINQ9Y6U3 715 aa9.29□□□□□ -0.92
CMTM1-210ENST00000528441 NUMA1Q14980 2115 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 ILVBLA1L0T0 632 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 CDX4O14627 284 aaPredicted RBP9.28□□□□□ -0.92
CMTM1-210ENST00000528441 BUB1O43683 1085 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 PRPSAP2O60256 369 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 LRIG2O94898 1065 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 IGLV3-19P01714 112 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 ADRB1P08588 477 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 RHOQP17081 205 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 XPAP23025 273 aaPredicted RBP9.28□□□□□ -0.92
CMTM1-210ENST00000528441 GLDCP23378 1020 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 CD27P26842 260 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 CHRNA3P32297 505 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 GJC1P36383 396 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 MAPKAPK2P49137 400 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 ZNF143P52747 638 aaPredicted RBP9.28□□□□□ -0.92
CMTM1-210ENST00000528441 GALCP54803 685 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 ADPRHP54922 357 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 HDAC4P56524 1084 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 GEMIN4P57678 1058 aaKnown RBP9.28□□□□□ -0.92
CMTM1-210ENST00000528441 RPL7AP62424 266 aaKnown RBP9.28□□□□□ -0.92
CMTM1-210ENST00000528441 SIM1P81133 766 aaPredicted RBP9.28□□□□□ -0.92
CMTM1-210ENST00000528441 RAD51Q06609 339 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 SUZ12Q15022 739 aaKnown RBP9.28□□□□□ -0.92
CMTM1-210ENST00000528441 IQCB1Q15051 598 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 INAVAQ3KP66 663 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 RAB6CQ53S08 254 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 PPP6R3Q5H9R7 873 aaPredicted RBP9.28□□□□□ -0.92
CMTM1-210ENST00000528441 N4BP2L1Q5TBK1 243 aaPredicted RBP9.28□□□□□ -0.92
CMTM1-210ENST00000528441 PEAR1Q5VY43 1037 aaPredicted RBP9.28□□□□□ -0.92
CMTM1-210ENST00000528441 ZNF783Q6ZMS7 281 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 LEKR1Q6ZMV7 388 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 ARCQ7LC44 396 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 APTXQ7Z2E3 356 aaKnown RBP9.28□□□□□ -0.92
CMTM1-210ENST00000528441 DNAAF5Q86Y56 855 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 RNF214Q8ND24 703 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 OR52K2Q8NGK3 314 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 NT5C3BQ969T7 300 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 SERAC1Q96JX3 654 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 SLC6A18Q96N87 628 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 CNPY3Q9BT09 278 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 RAB6CQ9H0N0 254 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 CAPN10Q9HC96 672 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 MRPL47Q9HD33 250 aaKnown RBP9.28□□□□□ -0.92
CMTM1-210ENST00000528441 TM9SF3Q9HD45 589 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 ZNHIT6Q9NWK9 470 aaKnown RBP9.28□□□□□ -0.92
CMTM1-210ENST00000528441 TAS2R14Q9NYV8 317 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 SERGEFQ9UGK8 458 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 IL36AQ9UHA7 158 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 TBC1D30Q9Y2I9 924 aa9.28□□□□□ -0.92
CMTM1-210ENST00000528441 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.28□□□□□ -0.92
CMTM1-210ENST00000528441 CEP250Q9BV73 2442 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms