RNA–Protein interactions for RNA: ENST00000528280.1

CHD7-208, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-208ENST00000528280 ZSCAN5CA6NGD5 496 aaPredicted RBP9.83□□□□□ -0.84
CHD7-208ENST00000528280 FAM47DPA6NHR8 397 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 EIF3CLB5ME19 914 aaKnown RBP9.83□□□□□ -0.84
CHD7-208ENST00000528280 TBC1D3LB9A6J9 549 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 TEX33O43247 280 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 PRNPP04156 253 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 PLEKP08567 350 aaPredicted RBP9.83□□□□□ -0.84
CHD7-208ENST00000528280 TBC1D3HP0C7X1 549 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 RHOQP17081 205 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 L1CAMP32004 1257 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 HTR7P34969 479 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 PSMD8P48556 350 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 STK19P49842 368 aaPredicted RBP9.83□□□□□ -0.84
CHD7-208ENST00000528280 C21orf59P57076 290 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 GNA12Q03113 381 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 GRIK2Q13002 908 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 NR1I3Q14994 352 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 ASIC2Q16515 512 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 CDO1Q16878 200 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 SOWAHCQ53LP3 525 aaPredicted RBP9.83□□□□□ -0.84
CHD7-208ENST00000528280 ALFQ53S48 1182 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 FIGNQ5HY92 759 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 TBC1D3GQ6DHY5 549 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 TBC1D3CQ6IPX1 549 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 RWDD4Q6NW29 188 aaKnown RBP9.83□□□□□ -0.84
CHD7-208ENST00000528280 DNAJC24Q6P3W2 148 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 WDR59Q6PJI9 974 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.83□□□□□ -0.84
CHD7-208ENST00000528280 ADAT2Q7Z6V5 191 aaKnown RBP9.83□□□□□ -0.84
CHD7-208ENST00000528280 PIP4P1Q86T03 277 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 CACUL1Q86Y37 369 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 PLPP6Q8IY26 295 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 MCOLN2Q8IZK6 566 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 TBC1D3Q8IZP1 549 aaPredicted RBP9.83□□□□□ -0.84
CHD7-208ENST00000528280 EMC1Q8N766 993 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 OR14C36Q8NHC7 312 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 FAM172AQ8WUF8 416 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 ISG20Q96AZ6 181 aaKnown RBP9.83□□□□□ -0.84
CHD7-208ENST00000528280 EIF3CQ99613 913 aaKnown RBP9.83□□□□□ -0.84
CHD7-208ENST00000528280 CNPY3Q9BT09 278 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 SPON2Q9BUD6 331 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 ACE2Q9BYF1 805 aaPredicted RBP9.83□□□□□ -0.84
CHD7-208ENST00000528280 ADAM33Q9BZ11 813 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 MAGEH1Q9H213 219 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 MTG2Q9H4K7 406 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 GAREM1Q9H706 876 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 TM9SF3Q9HD45 589 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 ANLNQ9NQW6 1124 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 DYRK4Q9NR20 520 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 MPP6Q9NZW5 540 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 DMTF1Q9Y222 760 aa9.83□□□□□ -0.84
CHD7-208ENST00000528280 TNRC6BQ9UPQ9 1833 aaKnown RBP9.83□□□□□ -0.84
CHD7-208ENST00000528280 CBX4O00257 560 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 VILLO15195 856 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 RNGTTO60942 597 aaKnown RBP9.82□□□□□ -0.84
CHD7-208ENST00000528280 TPM3P06753 285 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 SRCP12931 536 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 CHRNA3P32297 505 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 PRKCIP41743 596 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 CSNK1EP49674 416 aaKnown RBP9.82□□□□□ -0.84
CHD7-208ENST00000528280 SCAPQ12770 1279 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 OVGP1Q12889 678 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 IQCB1Q15051 598 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 C15orf59Q2T9L4 293 aaPredicted RBP9.82□□□□□ -0.84
CHD7-208ENST00000528280 HLA-BQ31612 363 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 EFHC2Q5JST6 749 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 TRNP1Q6NT89 227 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 SCYL2Q6P3W7 929 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 NCEH1Q6PIU2 408 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 DBX2Q6ZNG2 339 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 MON1BQ7L1V2 547 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 TFAP2DQ7Z6R9 452 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 PHLDB2Q86SQ0 1253 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 VPS36Q86VN1 386 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 ZSCAN30Q86W11 494 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 PCDH20Q8N6Y1 951 aaKnown RBP9.82□□□□□ -0.84
CHD7-208ENST00000528280 DEFB124Q8NES8 71 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 OR52K2Q8NGK3 314 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 JOSD2Q8TAC2 188 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 FAM174AQ8TBP5 190 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 PIP4K2CQ8TBX8 421 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 CASKIN2Q8WXE0 1202 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 BAP1Q92560 729 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 SYN2Q92777 582 aaPredicted RBP9.82□□□□□ -0.84
CHD7-208ENST00000528280 GATA6Q92908 595 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 FAM131CQ96AQ9 280 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 TBC1D31Q96DN5 1066 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 TRIM11Q96F44 468 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 PPP1R16AQ96I34 528 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 LRIG1Q96JA1 1093 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 CDC6Q99741 560 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 CATSPERBQ9H7T0 1116 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 PREBQ9HCU5 417 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 ATP13A1Q9HD20 1204 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 MRPL47Q9HD33 250 aaKnown RBP9.82□□□□□ -0.84
CHD7-208ENST00000528280 TM7SF3Q9NS93 570 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 TMEM248Q9NWD8 314 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 VPS51Q9UID3 782 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 ANKRD6Q9Y2G4 727 aa9.82□□□□□ -0.84
CHD7-208ENST00000528280 A0A0D9SEW6 157 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms