RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 FBXO21O94952 628 aa12.74□□□□□ -0.37
CAPN1-208ENST00000527323 LTFP02788 710 aa12.74□□□□□ -0.37
CAPN1-208ENST00000527323 CHRNGP07510 517 aa12.74□□□□□ -0.37
CAPN1-208ENST00000527323 MCF2P10911 925 aa12.74□□□□□ -0.37
CAPN1-208ENST00000527323 AMHR2Q16671 573 aa12.74□□□□□ -0.37
CAPN1-208ENST00000527323 SH2D4BQ5SQS7 431 aa12.74□□□□□ -0.37
CAPN1-208ENST00000527323 FSTL4Q6MZW2 842 aa12.74□□□□□ -0.37
CAPN1-208ENST00000527323 LCA5Q86VQ0 697 aa12.74□□□□□ -0.37
CAPN1-208ENST00000527323 CXorf38Q8TB03 319 aa12.74□□□□□ -0.37
CAPN1-208ENST00000527323 FCRL3Q96P31 734 aaPredicted RBP12.74□□□□□ -0.37
CAPN1-208ENST00000527323 CATSPER2Q96P56 530 aa12.74□□□□□ -0.37
CAPN1-208ENST00000527323 GATA5Q9BWX5 397 aaPredicted RBP12.74□□□□□ -0.37
CAPN1-208ENST00000527323 VRTNQ9H8Y1 702 aa12.74□□□□□ -0.37
CAPN1-208ENST00000527323 GALNT8Q9NY28 637 aa12.74□□□□□ -0.37
CAPN1-208ENST00000527323 KLHL8Q9P2G9 620 aaPredicted RBP12.74□□□□□ -0.37
CAPN1-208ENST00000527323 PRPF19Q9UMS4 504 aaKnown RBP12.74□□□□□ -0.37
CAPN1-208ENST00000527323 AK5Q9Y6K8 562 aa12.74□□□□□ -0.37
CAPN1-208ENST00000527323 KCNK1O00180 336 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 MFSD11O43934 449 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 TNFAIP8O95379 198 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 PDGFRBP09619 1106 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 SREBF2Q12772 1141 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 LAMC2Q13753 1193 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 GRIK4Q16099 956 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 LSM12Q3MHD2 195 aaKnown RBP12.73□□□□□ -0.37
CAPN1-208ENST00000527323 SEL1L3Q68CR1 1132 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 TTC39CQ8N584 583 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 CATSPER1Q8NEC5 780 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 SLC35F5Q8WV83 523 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 MARK4Q96L34 752 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 TSNARE1Q96NA8 513 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 TRPM7Q96QT4 1865 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 HACD1B0YJ81 288 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.73□□□□□ -0.37
CAPN1-208ENST00000527323 AP1G1O43747 822 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 GABBR2O75899 941 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 TMCC1O94876 653 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 C2P06681 752 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 FAM58BPP0C7Q3 252 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 FAM200BP0CF97 657 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 PRKAR2AP13861 404 aaKnown RBP12.73□□□□□ -0.37
CAPN1-208ENST00000527323 CCR10P46092 362 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 ADGRE1Q14246 886 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 CYTH1Q15438 398 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 SOWAHAQ2M3V2 549 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 PABPC1LQ4VXU2 614 aaKnown RBP12.73□□□□□ -0.37
CAPN1-208ENST00000527323 SPANXN3Q5MJ09 141 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 TMA16Q96EY4 203 aaKnown RBP12.73□□□□□ -0.37
CAPN1-208ENST00000527323 TASP1Q9H6P5 420 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 CREBZFQ9NS37 354 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 BFARQ9NZS9 450 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 TLK1Q9UKI8 766 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 SLC39A10Q9ULF5 831 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 RAB26Q9ULW5 256 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 PHF24Q9UPV7 400 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 A0A0G2JMZ2 1700 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 CCDC78A2IDD5 438 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 G3V2L1 256 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 GOLGA8TH3BQL2 631 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 STX16-NPEPL1H3BU86 382 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 GLDCP23378 1020 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 CACNB2Q08289 660 aaPredicted RBP12.73□□□□□ -0.37
CAPN1-208ENST00000527323 TMEM259Q4ZIN3 620 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 GLRA4Q5JXX5 417 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 TMEM198Q66K66 360 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 ZFP1Q6P2D0 407 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 PAOXQ6QHF9 649 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.73□□□□□ -0.37
CAPN1-208ENST00000527323 ZFP28Q8NHY6 868 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 RP9Q8TA86 221 aaKnown RBP12.73□□□□□ -0.37
CAPN1-208ENST00000527323 URGCPQ8TCY9 931 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 ZFRQ96KR1 1074 aaKnown RBP12.73□□□□□ -0.37
CAPN1-208ENST00000527323 RBBP8Q99708 897 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 MRPL1Q9BYD6 325 aaKnown RBP12.73□□□□□ -0.37
CAPN1-208ENST00000527323 MRPS26Q9BYN8 205 aaKnown RBP12.73□□□□□ -0.37
CAPN1-208ENST00000527323 EPB41L1Q9H4G0 881 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 PRDM12Q9H4Q4 367 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 PDZD7Q9H5P4 517 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 LRRC40Q9H9A6 602 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 VTA1Q9NP79 307 aa12.73□□□□□ -0.37
CAPN1-208ENST00000527323 ARHGAP10A1A4S6 786 aa12.72□□□□□ -0.37
CAPN1-208ENST00000527323 TMEM114B3SHH9 223 aa12.72□□□□□ -0.37
CAPN1-208ENST00000527323 HDAC3O15379 428 aa12.72□□□□□ -0.37
CAPN1-208ENST00000527323 PIGNO95427 931 aa12.72□□□□□ -0.37
CAPN1-208ENST00000527323 ME2P23368 584 aa12.72□□□□□ -0.37
CAPN1-208ENST00000527323 PTPN9P43378 593 aa12.72□□□□□ -0.37
CAPN1-208ENST00000527323 GLRBP48167 497 aa12.72□□□□□ -0.37
CAPN1-208ENST00000527323 RPL14P50914 215 aaKnown RBP12.72□□□□□ -0.37
CAPN1-208ENST00000527323 INHBCP55103 352 aa12.72□□□□□ -0.37
CAPN1-208ENST00000527323 MS4A2Q01362 244 aa12.72□□□□□ -0.37
CAPN1-208ENST00000527323 SP3Q02447 781 aa12.72□□□□□ -0.37
CAPN1-208ENST00000527323 MYLK3Q32MK0 819 aa12.72□□□□□ -0.37
CAPN1-208ENST00000527323 MARCH8Q5T0T0 291 aa12.72□□□□□ -0.37
CAPN1-208ENST00000527323 SMYD5Q6GMV2 418 aa12.72□□□□□ -0.37
CAPN1-208ENST00000527323 ZNF567Q8N184 647 aa12.72□□□□□ -0.37
CAPN1-208ENST00000527323 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.72□□□□□ -0.37
CAPN1-208ENST00000527323 METTL25Q8N6Q8 603 aa12.72□□□□□ -0.37
CAPN1-208ENST00000527323 CEP70Q8NHQ1 597 aa12.72□□□□□ -0.37
CAPN1-208ENST00000527323 PKP2Q99959 881 aa12.72□□□□□ -0.37
CAPN1-208ENST00000527323 APOL2Q9BQE5 337 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms