RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 NAPEPLDQ6IQ20 393 aa20.74■□□□□ 0.91
SMIM3-201ENST00000526627 MOCOSQ96EN8 888 aa20.74■□□□□ 0.91
SMIM3-201ENST00000526627 OXSMQ9NWU1 459 aa20.74■□□□□ 0.91
SMIM3-201ENST00000526627 CCDC78A2IDD5 438 aa20.73■□□□□ 0.91
SMIM3-201ENST00000526627 CHRNA1P02708 482 aa20.73■□□□□ 0.91
SMIM3-201ENST00000526627 NCF2P19878 526 aaPredicted RBP20.73■□□□□ 0.91
SMIM3-201ENST00000526627 BDNFP23560 247 aa20.73■□□□□ 0.91
SMIM3-201ENST00000526627 NUMBP49757 651 aa20.73■□□□□ 0.91
SMIM3-201ENST00000526627 ARHGAP12Q8IWW6 846 aa20.73■□□□□ 0.91
SMIM3-201ENST00000526627 SPATA22Q8NHS9 363 aa20.73■□□□□ 0.91
SMIM3-201ENST00000526627 ACTRT2Q8TDY3 377 aa20.73■□□□□ 0.91
SMIM3-201ENST00000526627 PKMYT1Q99640 499 aa20.73■□□□□ 0.91
SMIM3-201ENST00000526627 ZNF184Q99676 751 aaPredicted RBP20.73■□□□□ 0.91
SMIM3-201ENST00000526627 APBA2Q99767 749 aa20.73■□□□□ 0.91
SMIM3-201ENST00000526627 OSBPL2Q9H1P3 480 aa20.73■□□□□ 0.91
SMIM3-201ENST00000526627 CPSF2Q9P2I0 782 aaKnown RBP20.73■□□□□ 0.91
SMIM3-201ENST00000526627 SLC39A10Q9ULF5 831 aa20.73■□□□□ 0.91
SMIM3-201ENST00000526627 ITGAXP20702 1163 aa20.73■□□□□ 0.91
SMIM3-201ENST00000526627 RPL9P32969 192 aaKnown RBP20.73■□□□□ 0.91
SMIM3-201ENST00000526627 AP2B1P63010 937 aa20.73■□□□□ 0.91
SMIM3-201ENST00000526627 PEX6Q13608 980 aa20.73■□□□□ 0.91
SMIM3-201ENST00000526627 ANO4Q32M45 955 aa20.73■□□□□ 0.91
SMIM3-201ENST00000526627 CD300LGQ6UXG3 332 aa20.73■□□□□ 0.91
SMIM3-201ENST00000526627 FRMD7Q6ZUT3 714 aa20.73■□□□□ 0.91
SMIM3-201ENST00000526627 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.73■□□□□ 0.91
SMIM3-201ENST00000526627 GIT1Q9Y2X7 761 aa20.73■□□□□ 0.91
SMIM3-201ENST00000526627 DCXO43602 365 aa20.72■□□□□ 0.91
SMIM3-201ENST00000526627 CHRNGP07510 517 aa20.72■□□□□ 0.91
SMIM3-201ENST00000526627 ZNF33AQ06730 810 aa20.72■□□□□ 0.91
SMIM3-201ENST00000526627 PRPSAP1Q14558 356 aa20.72■□□□□ 0.91
SMIM3-201ENST00000526627 LBRQ14739 615 aaKnown RBP20.72■□□□□ 0.91
SMIM3-201ENST00000526627 SCML4Q8N228 414 aa20.72■□□□□ 0.91
SMIM3-201ENST00000526627 TDRD5Q8NAT2 981 aaKnown RBP20.72■□□□□ 0.91
SMIM3-201ENST00000526627 CMTM5Q96DZ9 223 aa20.72■□□□□ 0.91
SMIM3-201ENST00000526627 TTC1Q99614 292 aa20.72■□□□□ 0.91
SMIM3-201ENST00000526627 RHOJQ9H4E5 214 aa20.72■□□□□ 0.91
SMIM3-201ENST00000526627 ACSS2Q9NR19 701 aa20.72■□□□□ 0.91
SMIM3-201ENST00000526627 TK2O00142 265 aa20.72■□□□□ 0.91
SMIM3-201ENST00000526627 FKBP6O75344 327 aa20.72■□□□□ 0.91
SMIM3-201ENST00000526627 CTSHP09668 335 aa20.72■□□□□ 0.91
SMIM3-201ENST00000526627 CD1EP15812 388 aa20.72■□□□□ 0.91
SMIM3-201ENST00000526627 GLDCP23378 1020 aa20.72■□□□□ 0.91
SMIM3-201ENST00000526627 ZRSR2Q15696 482 aaKnown RBP20.72■□□□□ 0.91
SMIM3-201ENST00000526627 TMEM154Q6P9G4 183 aa20.72■□□□□ 0.91
SMIM3-201ENST00000526627 AAGABQ6PD74 315 aa20.72■□□□□ 0.91
SMIM3-201ENST00000526627 ZYG11AQ6WRX3 759 aa20.72■□□□□ 0.91
SMIM3-201ENST00000526627 RNF111Q6ZNA4 994 aa20.72■□□□□ 0.91
SMIM3-201ENST00000526627 PAXIP1Q6ZW49 1069 aaPredicted RBP20.72■□□□□ 0.91
SMIM3-201ENST00000526627 OR52B2Q96RD2 323 aa20.72■□□□□ 0.91
SMIM3-201ENST00000526627 TMEM209Q96SK2 561 aa20.72■□□□□ 0.91
SMIM3-201ENST00000526627 ACE2Q9BYF1 805 aaPredicted RBP20.72■□□□□ 0.91
SMIM3-201ENST00000526627 SENP6Q9GZR1 1112 aaPredicted RBP20.72■□□□□ 0.91
SMIM3-201ENST00000526627 S100A14Q9HCY8 104 aa20.72■□□□□ 0.91
SMIM3-201ENST00000526627 CHST12Q9NRB3 414 aa20.72■□□□□ 0.91
SMIM3-201ENST00000526627 ARHGEF38Q9NXL2 777 aa20.72■□□□□ 0.91
SMIM3-201ENST00000526627 LOC100653049A0A140TA62 436 aa20.71■□□□□ 0.91
SMIM3-201ENST00000526627 E9PBE3 544 aa20.71■□□□□ 0.91
SMIM3-201ENST00000526627 M0QZ92 97 aa20.71■□□□□ 0.91
SMIM3-201ENST00000526627 PHGDHO43175 533 aaKnown RBP20.71■□□□□ 0.91
SMIM3-201ENST00000526627 BUD23O43709 281 aaKnown RBP20.71■□□□□ 0.91
SMIM3-201ENST00000526627 KLHL41O60662 606 aa20.71■□□□□ 0.91
SMIM3-201ENST00000526627 KRT34O76011 436 aa20.71■□□□□ 0.91
SMIM3-201ENST00000526627 PDE5AO76074 875 aa20.71■□□□□ 0.91
SMIM3-201ENST00000526627 MT-CYBP00156 380 aaPredicted RBP20.71■□□□□ 0.91
SMIM3-201ENST00000526627 SRGAP2BP0DMP2 458 aa20.71■□□□□ 0.91
SMIM3-201ENST00000526627 PRDX6P30041 224 aa20.71■□□□□ 0.91
SMIM3-201ENST00000526627 HADHAP40939 763 aa20.71■□□□□ 0.91
SMIM3-201ENST00000526627 CCR10P46092 362 aa20.71■□□□□ 0.91
SMIM3-201ENST00000526627 PSEN1P49768 467 aa20.71■□□□□ 0.91
SMIM3-201ENST00000526627 KLF10Q13118 480 aa20.71■□□□□ 0.91
SMIM3-201ENST00000526627 CCNIQ14094 377 aa20.71■□□□□ 0.91
SMIM3-201ENST00000526627 DENND5AQ6IQ26 1287 aa20.71■□□□□ 0.91
SMIM3-201ENST00000526627 GDF6Q6KF10 455 aaPredicted RBP20.71■□□□□ 0.91
SMIM3-201ENST00000526627 RWDD4Q6NW29 188 aaKnown RBP20.71■□□□□ 0.91
SMIM3-201ENST00000526627 LINC00523Q86TU6 105 aa20.71■□□□□ 0.91
SMIM3-201ENST00000526627 LRRTM3Q86VH5 581 aa20.71■□□□□ 0.91
SMIM3-201ENST00000526627 SCAMP5Q8TAC9 235 aa20.71■□□□□ 0.91
SMIM3-201ENST00000526627 RNF34Q969K3 372 aa20.71■□□□□ 0.91
SMIM3-201ENST00000526627 ACBD6Q9BR61 282 aa20.71■□□□□ 0.91
SMIM3-201ENST00000526627 NDE1Q9NXR1 346 aa20.71■□□□□ 0.91
SMIM3-201ENST00000526627 CDH22Q9UJ99 828 aa20.71■□□□□ 0.91
SMIM3-201ENST00000526627 ANKRD6Q9Y2G4 727 aa20.71■□□□□ 0.91
SMIM3-201ENST00000526627 AP3B1O00203 1094 aa20.71■□□□□ 0.91
SMIM3-201ENST00000526627 DFFAO00273 331 aa20.71■□□□□ 0.91
SMIM3-201ENST00000526627 PSMD3O43242 534 aa20.71■□□□□ 0.91
SMIM3-201ENST00000526627 H2AFYO75367 372 aaKnown RBP20.71■□□□□ 0.91
SMIM3-201ENST00000526627 ZMPSTE24O75844 475 aa20.71■□□□□ 0.91
SMIM3-201ENST00000526627 SLC35E2BP0CK96 405 aa20.71■□□□□ 0.91
SMIM3-201ENST00000526627 CCNCP24863 283 aa20.71■□□□□ 0.91
SMIM3-201ENST00000526627 MPSTP25325 297 aa20.71■□□□□ 0.91
SMIM3-201ENST00000526627 BRCC3P46736 316 aa20.71■□□□□ 0.91
SMIM3-201ENST00000526627 COG7P83436 770 aa20.71■□□□□ 0.91
SMIM3-201ENST00000526627 PAN2Q504Q3 1202 aaKnown RBP20.71■□□□□ 0.91
SMIM3-201ENST00000526627 PKN3Q6P5Z2 889 aa20.71■□□□□ 0.91
SMIM3-201ENST00000526627 MRPL10Q7Z7H8 261 aaKnown RBP20.71■□□□□ 0.91
SMIM3-201ENST00000526627 ADGRG6Q86SQ4 1221 aa20.71■□□□□ 0.91
SMIM3-201ENST00000526627 AGR3Q8TD06 166 aa20.71■□□□□ 0.91
SMIM3-201ENST00000526627 AGO3Q9H9G7 860 aaKnown RBP20.71■□□□□ 0.91
SMIM3-201ENST00000526627 MYLKQ15746 1914 aa20.7■□□□□ 0.9
SMIM3-201ENST00000526627 TARM1B6A8C7 271 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms