RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 ARHGAP8P85298 464 aa4.89□□□□□ -1.63
CSDE1-211ENST00000525970 CCDC15Q0P6D6 951 aa4.89□□□□□ -1.63
CSDE1-211ENST00000525970 CHAF1BQ13112 559 aa4.89□□□□□ -1.63
CSDE1-211ENST00000525970 SLC30A6Q6NXT4 461 aa4.89□□□□□ -1.63
CSDE1-211ENST00000525970 SLC39A5Q6ZMH5 540 aa4.89□□□□□ -1.63
CSDE1-211ENST00000525970 IKBIPQ70UQ0 350 aa4.89□□□□□ -1.63
CSDE1-211ENST00000525970 GALNT7Q86SF2 657 aa4.89□□□□□ -1.63
CSDE1-211ENST00000525970 AMIGO2Q86SJ2 522 aa4.89□□□□□ -1.63
CSDE1-211ENST00000525970 PRPF39Q86UA1 669 aaKnown RBP4.89□□□□□ -1.63
CSDE1-211ENST00000525970 ADGRF3Q8IZF5 1079 aa4.89□□□□□ -1.63
CSDE1-211ENST00000525970 CNTROBQ8N137 903 aa4.89□□□□□ -1.63
CSDE1-211ENST00000525970 SIRT6Q8N6T7 355 aa4.89□□□□□ -1.63
CSDE1-211ENST00000525970 TBC1D5Q92609 795 aa4.89□□□□□ -1.63
CSDE1-211ENST00000525970 SAAL1Q96ER3 474 aa4.89□□□□□ -1.63
CSDE1-211ENST00000525970 ZMAT2Q96NC0 199 aaKnown RBP4.89□□□□□ -1.63
CSDE1-211ENST00000525970 PIP5K1AQ99755 562 aa4.89□□□□□ -1.63
CSDE1-211ENST00000525970 MXD3Q9BW11 206 aa4.89□□□□□ -1.63
CSDE1-211ENST00000525970 CINPQ9BW66 212 aaPredicted RBP4.89□□□□□ -1.63
CSDE1-211ENST00000525970 HDHD5Q9BXW7 423 aa4.89□□□□□ -1.63
CSDE1-211ENST00000525970 RNF26Q9BY78 433 aaPredicted RBP4.89□□□□□ -1.63
CSDE1-211ENST00000525970 ALDH8A1Q9H2A2 487 aaPredicted RBP4.89□□□□□ -1.63
CSDE1-211ENST00000525970 EPHX3Q9H6B9 360 aa4.89□□□□□ -1.63
CSDE1-211ENST00000525970 ZCCHC17Q9NP64 241 aaKnown RBP4.89□□□□□ -1.63
CSDE1-211ENST00000525970 GAR1Q9NY12 217 aaKnown RBP4.89□□□□□ -1.63
CSDE1-211ENST00000525970 FZD4Q9ULV1 537 aa4.89□□□□□ -1.63
CSDE1-211ENST00000525970 COL3A1P02461 1466 aaPredicted RBP4.88□□□□□ -1.63
CSDE1-211ENST00000525970 DNAJC9-AS1A6NH13 148 aa4.88□□□□□ -1.63
CSDE1-211ENST00000525970 LRRC3CA6NJW4 275 aa4.88□□□□□ -1.63
CSDE1-211ENST00000525970 PROB1E7EW31 1015 aa4.88□□□□□ -1.63
CSDE1-211ENST00000525970 AP4M1O00189 453 aa4.88□□□□□ -1.63
CSDE1-211ENST00000525970 SYN3O14994 580 aa4.88□□□□□ -1.63
CSDE1-211ENST00000525970 TSPAN9O75954 239 aa4.88□□□□□ -1.63
CSDE1-211ENST00000525970 DLDP09622 509 aaKnown RBP4.88□□□□□ -1.63
CSDE1-211ENST00000525970 ENGP17813 658 aa4.88□□□□□ -1.63
CSDE1-211ENST00000525970 CDH2P19022 906 aaPredicted RBP4.88□□□□□ -1.63
CSDE1-211ENST00000525970 GJC1P36383 396 aa4.88□□□□□ -1.63
CSDE1-211ENST00000525970 GARSP41250 739 aaKnown RBP4.88□□□□□ -1.63
CSDE1-211ENST00000525970 AGTR2P50052 363 aa4.88□□□□□ -1.63
CSDE1-211ENST00000525970 SOX10P56693 466 aa4.88□□□□□ -1.63
CSDE1-211ENST00000525970 ZBED6P86452 979 aa4.88□□□□□ -1.63
CSDE1-211ENST00000525970 B4GALNT1Q00973 533 aa4.88□□□□□ -1.63
CSDE1-211ENST00000525970 GOLGA8FQ08AF8 430 aa4.88□□□□□ -1.63
CSDE1-211ENST00000525970 LMAN2Q12907 356 aa4.88□□□□□ -1.63
CSDE1-211ENST00000525970 GAB1Q13480 694 aa4.88□□□□□ -1.63
CSDE1-211ENST00000525970 ALKBH1Q13686 389 aaKnown RBP4.88□□□□□ -1.63
CSDE1-211ENST00000525970 BYSLQ13895 437 aaKnown RBP4.88□□□□□ -1.63
CSDE1-211ENST00000525970 ZNF667Q5HYK9 610 aa4.88□□□□□ -1.63
CSDE1-211ENST00000525970 MTFR2Q6P444 385 aa4.88□□□□□ -1.63
CSDE1-211ENST00000525970 NCEH1Q6PIU2 408 aa4.88□□□□□ -1.63
CSDE1-211ENST00000525970 C17orf99Q6UX52 265 aa4.88□□□□□ -1.63
CSDE1-211ENST00000525970 WDR53Q7Z5U6 358 aaPredicted RBP4.88□□□□□ -1.63
CSDE1-211ENST00000525970 WDTC1Q8N5D0 677 aa4.88□□□□□ -1.63
CSDE1-211ENST00000525970 C12orf76Q8N812 135 aaPredicted RBP4.88□□□□□ -1.63
CSDE1-211ENST00000525970 GPATCH11Q8N954 259 aa4.88□□□□□ -1.63
CSDE1-211ENST00000525970 CCDC191Q8NCU4 936 aa4.88□□□□□ -1.63
CSDE1-211ENST00000525970 ATP2A3Q93084 1043 aa4.88□□□□□ -1.63
CSDE1-211ENST00000525970 FEM1CQ96JP0 617 aa4.88□□□□□ -1.63
CSDE1-211ENST00000525970 TTC12Q9H892 705 aaPredicted RBP4.88□□□□□ -1.63
CSDE1-211ENST00000525970 DLL3Q9NYJ7 618 aa4.88□□□□□ -1.63
CSDE1-211ENST00000525970 HSPB7Q9UBY9 170 aa4.88□□□□□ -1.63
CSDE1-211ENST00000525970 AMFRQ9UKV5 643 aa4.88□□□□□ -1.63
CSDE1-211ENST00000525970 ZNF215Q9UL58 517 aaPredicted RBP4.88□□□□□ -1.63
CSDE1-211ENST00000525970 B3GNT3Q9Y2A9 372 aa4.88□□□□□ -1.63
CSDE1-211ENST00000525970 KCNE2Q9Y6J6 123 aa4.88□□□□□ -1.63
CSDE1-211ENST00000525970 CES2O00748 559 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 OR2C1O95371 312 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 HNRNPCP07910 306 aaKnown RBP eCLIP4.87□□□□□ -1.633e-6■■■□□ 18.5
CSDE1-211ENST00000525970 CHRM4P08173 479 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 CYP4B1P13584 511 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 WT1P19544 449 aaPredicted RBP4.87□□□□□ -1.63
CSDE1-211ENST00000525970 DRD4P21917 467 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 STAT6P42226 847 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 TERF1P54274 439 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 EIF3BP55884 814 aaKnown RBP4.87□□□□□ -1.63
CSDE1-211ENST00000525970 SLC37A1P57057 533 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 EEFSECP57772 596 aaKnown RBP4.87□□□□□ -1.63
CSDE1-211ENST00000525970 EFNB1P98172 346 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 TMEM115Q12893 351 aaPredicted RBP4.87□□□□□ -1.63
CSDE1-211ENST00000525970 GPR162Q16538 588 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 SLC18A3Q16572 532 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 GXYLT1Q4G148 440 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 PCID2Q5JVF3 399 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 PLEKHS1Q5SXH7 462 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 ANKRD16Q6P6B7 361 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 CYP20A1Q6UW02 462 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 PARS2Q7L3T8 475 aaKnown RBP4.87□□□□□ -1.63
CSDE1-211ENST00000525970 RTL10Q7L3V2 364 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 SLC29A4Q7RTT9 530 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 BHLHA9Q7RTU4 235 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 SFTPA1Q8IWL2 248 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 BRSK2Q8IWQ3 736 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 SRBD1Q8N5C6 995 aaKnown RBP4.87□□□□□ -1.63
CSDE1-211ENST00000525970 SRFBP1Q8NEF9 429 aaKnown RBP4.87□□□□□ -1.63
CSDE1-211ENST00000525970 C2CD4CQ8TF44 421 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 SCARB1Q8WTV0 552 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 SCFD2Q8WU76 684 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 NCSTNQ92542 709 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 CNOT9Q92600 299 aaKnown RBP4.87□□□□□ -1.63
CSDE1-211ENST00000525970 KCNJ9Q92806 393 aa4.87□□□□□ -1.63
CSDE1-211ENST00000525970 SARAFQ96BY9 339 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms