RNA–Protein interactions for RNA: ENST00000525155.5

CHKA-203, Transcript of choline kinase alpha, humanhuman

TSL 5

Gene CHKA, Length 1,201 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-203ENST00000525155 SCYL2Q6P3W7 929 aa12.53□□□□□ -0.4
CHKA-203ENST00000525155 RAD9BQ6WBX8 426 aa12.53□□□□□ -0.4
CHKA-203ENST00000525155 RAB44Q7Z6P3 723 aaPredicted RBP12.53□□□□□ -0.4
CHKA-203ENST00000525155 KIAA1328Q86T90 577 aa12.53□□□□□ -0.4
CHKA-203ENST00000525155 FAM124AQ86V42 546 aa12.53□□□□□ -0.4
CHKA-203ENST00000525155 HDDC3Q8N4P3 179 aa12.53□□□□□ -0.4
CHKA-203ENST00000525155 ZCCHC9Q8N567 271 aaKnown RBP12.53□□□□□ -0.4
CHKA-203ENST00000525155 PNPLA1Q8N8W4 532 aa12.53□□□□□ -0.4
CHKA-203ENST00000525155 UCMAQ8WVF2 138 aa12.53□□□□□ -0.4
CHKA-203ENST00000525155 PRCCQ92733 491 aaPredicted RBP12.53□□□□□ -0.4
CHKA-203ENST00000525155 ARHGEF26Q96DR7 871 aa12.53□□□□□ -0.4
CHKA-203ENST00000525155 MRGPRX3Q96LB0 322 aa12.53□□□□□ -0.4
CHKA-203ENST00000525155 PRICKLE1Q96MT3 831 aaPredicted RBP12.53□□□□□ -0.4
CHKA-203ENST00000525155 PPP1R9BQ96SB3 815 aa12.53□□□□□ -0.4
CHKA-203ENST00000525155 PACSIN1Q9BY11 444 aa12.53□□□□□ -0.4
CHKA-203ENST00000525155 SLC32A1Q9H598 525 aa12.53□□□□□ -0.4
CHKA-203ENST00000525155 DONSONQ9NYP3 566 aa12.53□□□□□ -0.4
CHKA-203ENST00000525155 GGA2Q9UJY4 613 aa12.53□□□□□ -0.4
CHKA-203ENST00000525155 HS3ST4Q9Y661 456 aa12.53□□□□□ -0.4
CHKA-203ENST00000525155 A0A1B0GTW7 788 aa12.52□□□□□ -0.41
CHKA-203ENST00000525155 SRRM3A6NNA2 597 aaPredicted RBP12.52□□□□□ -0.41
CHKA-203ENST00000525155 KCNK3O14649 394 aa12.52□□□□□ -0.41
CHKA-203ENST00000525155 TBL1XO60907 577 aa12.52□□□□□ -0.41
CHKA-203ENST00000525155 PROSCO94903 275 aa12.52□□□□□ -0.41
CHKA-203ENST00000525155 SYPP08247 313 aa12.52□□□□□ -0.41
CHKA-203ENST00000525155 PABPC1P11940 636 aaKnown RBP12.52□□□□□ -0.41
CHKA-203ENST00000525155 SLC1A1P43005 524 aa12.52□□□□□ -0.41
CHKA-203ENST00000525155 NOP2P46087 812 aaKnown RBP12.52□□□□□ -0.41
CHKA-203ENST00000525155 VAV2P52735 878 aa12.52□□□□□ -0.41
CHKA-203ENST00000525155 HADHBP55084 474 aaKnown RBP12.52□□□□□ -0.41
CHKA-203ENST00000525155 OGDHQ02218 1023 aa12.52□□□□□ -0.41
CHKA-203ENST00000525155 KIF5AQ12840 1032 aa12.52□□□□□ -0.41
CHKA-203ENST00000525155 AUHQ13825 339 aaKnown RBP12.52□□□□□ -0.41
CHKA-203ENST00000525155 TRIP6Q15654 476 aaKnown RBP12.52□□□□□ -0.41
CHKA-203ENST00000525155 WDR45BQ5MNZ6 344 aa12.52□□□□□ -0.41
CHKA-203ENST00000525155 SYCP2LQ5T4T6 812 aa12.52□□□□□ -0.41
CHKA-203ENST00000525155 RAP1GAP2Q684P5 730 aa12.52□□□□□ -0.41
CHKA-203ENST00000525155 SERPINA13PQ6UXR4 307 aa12.52□□□□□ -0.41
CHKA-203ENST00000525155 LGI2Q8N0V4 545 aa12.52□□□□□ -0.41
CHKA-203ENST00000525155 PDLIM2Q96JY6 352 aa12.52□□□□□ -0.41
CHKA-203ENST00000525155 RPRD1AQ96P16 312 aaPredicted RBP12.52□□□□□ -0.41
CHKA-203ENST00000525155 PRMT1Q99873 361 aaKnown RBP12.52□□□□□ -0.41
CHKA-203ENST00000525155 TSGA10Q9BZW7 698 aa12.52□□□□□ -0.41
CHKA-203ENST00000525155 SIK2Q9H0K1 926 aa12.52□□□□□ -0.41
CHKA-203ENST00000525155 MIR1-1HGQ9H1L0 117 aa12.52□□□□□ -0.41
CHKA-203ENST00000525155 EBF2Q9HAK2 575 aa12.52□□□□□ -0.41
CHKA-203ENST00000525155 TOR4AQ9NXH8 423 aa12.52□□□□□ -0.41
CHKA-203ENST00000525155 PPARGC1AQ9UBK2 798 aaKnown RBP12.52□□□□□ -0.41
CHKA-203ENST00000525155 OR12D3Q9UGF7 316 aa12.52□□□□□ -0.41
CHKA-203ENST00000525155 FNDC3AQ9Y2H6 1198 aaKnown RBP12.52□□□□□ -0.41
CHKA-203ENST00000525155 MSRB2Q9Y3D2 182 aa12.52□□□□□ -0.41
CHKA-203ENST00000525155 NEUROG3Q9Y4Z2 214 aa12.52□□□□□ -0.41
CHKA-203ENST00000525155 ADAMTS9Q9P2N4 1935 aa12.52□□□□□ -0.41
CHKA-203ENST00000525155 A0A1B0GVM2 712 aa12.51□□□□□ -0.41
CHKA-203ENST00000525155 A0A1B0GVT2 93 aa12.51□□□□□ -0.41
CHKA-203ENST00000525155 TCAF2A6NFQ2 919 aa12.51□□□□□ -0.41
CHKA-203ENST00000525155 BCAT2O15382 392 aaPredicted RBP12.51□□□□□ -0.41
CHKA-203ENST00000525155 CLDN11O75508 207 aa12.51□□□□□ -0.41
CHKA-203ENST00000525155 DLDP09622 509 aaKnown RBP12.51□□□□□ -0.41
CHKA-203ENST00000525155 OXTRP30559 389 aa12.51□□□□□ -0.41
CHKA-203ENST00000525155 L1CAMP32004 1257 aa12.51□□□□□ -0.41
CHKA-203ENST00000525155 CTSOP43234 321 aaPredicted RBP12.51□□□□□ -0.41
CHKA-203ENST00000525155 CSNK1EP49674 416 aaKnown RBP12.51□□□□□ -0.41
CHKA-203ENST00000525155 CCDC173Q0VFZ6 552 aa12.51□□□□□ -0.41
CHKA-203ENST00000525155 SLC14A1Q13336 389 aa12.51□□□□□ -0.41
CHKA-203ENST00000525155 SLC12A1Q13621 1099 aa12.51□□□□□ -0.41
CHKA-203ENST00000525155 KIF19Q2TAC6 998 aa12.51□□□□□ -0.41
CHKA-203ENST00000525155 HLA-BQ31612 363 aa12.51□□□□□ -0.41
CHKA-203ENST00000525155 C5orf22Q49AR2 442 aa12.51□□□□□ -0.41
CHKA-203ENST00000525155 ERMARDQ5T6L9 678 aa12.51□□□□□ -0.41
CHKA-203ENST00000525155 FBXL22Q6P050 247 aa12.51□□□□□ -0.41
CHKA-203ENST00000525155 LAYNQ6UX15 382 aa12.51□□□□□ -0.41
CHKA-203ENST00000525155 RABEPKQ7Z6M1 372 aa12.51□□□□□ -0.41
CHKA-203ENST00000525155 MARCH9Q86YJ5 346 aa12.51□□□□□ -0.41
CHKA-203ENST00000525155 CFAP52Q8N1V2 620 aa12.51□□□□□ -0.41
CHKA-203ENST00000525155 FIBINQ8TAL6 211 aa12.51□□□□□ -0.41
CHKA-203ENST00000525155 UBE2Q2Q8WVN8 375 aa12.51□□□□□ -0.41
CHKA-203ENST00000525155 TEKT4Q8WW24 435 aa12.51□□□□□ -0.41
CHKA-203ENST00000525155 TTC17Q96AE7 1141 aa12.51□□□□□ -0.41
CHKA-203ENST00000525155 EPAS1Q99814 870 aa12.51□□□□□ -0.41
CHKA-203ENST00000525155 STIM2Q9P246 746 aa12.51□□□□□ -0.41
CHKA-203ENST00000525155 SERGEFQ9UGK8 458 aa12.51□□□□□ -0.41
CHKA-203ENST00000525155 PCOLCE2Q9UKZ9 415 aa12.51□□□□□ -0.41
CHKA-203ENST00000525155 FZD10Q9ULW2 581 aa12.51□□□□□ -0.41
CHKA-203ENST00000525155 CABIN1Q9Y6J0 2220 aa12.5□□□□□ -0.41
CHKA-203ENST00000525155 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.5□□□□□ -0.41
CHKA-203ENST00000525155 DRGXA6NNA5 263 aa12.5□□□□□ -0.41
CHKA-203ENST00000525155 E9PAM4 449 aa12.5□□□□□ -0.41
CHKA-203ENST00000525155 H0Y626 953 aa12.5□□□□□ -0.41
CHKA-203ENST00000525155 WNT9AO14904 365 aa12.5□□□□□ -0.41
CHKA-203ENST00000525155 PJA2O43164 708 aa12.5□□□□□ -0.41
CHKA-203ENST00000525155 LRCH4O75427 683 aa12.5□□□□□ -0.41
CHKA-203ENST00000525155 KRT7P08729 469 aa12.5□□□□□ -0.41
CHKA-203ENST00000525155 HOXB3P14651 431 aaPredicted RBP12.5□□□□□ -0.41
CHKA-203ENST00000525155 GNSP15586 552 aa12.5□□□□□ -0.41
CHKA-203ENST00000525155 MIPP30301 263 aa12.5□□□□□ -0.41
CHKA-203ENST00000525155 SSR1P43307 286 aaKnown RBP12.5□□□□□ -0.41
CHKA-203ENST00000525155 CDH4P55283 916 aa12.5□□□□□ -0.41
CHKA-203ENST00000525155 ZNF177Q13360 481 aaPredicted RBP12.5□□□□□ -0.41
CHKA-203ENST00000525155 CDH18Q13634 790 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms