RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 MYH14Q7Z406 1995 aaKnown RBP1.94□□□□□ -2.1
CD44-212ENST00000524922 ATRXP46100 2492 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 ERVV-1B6SEH8 477 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 AREL1O15033 823 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 PRPF4O43172 522 aaKnown RBP eCLIP1.94□□□□□ -2.1
CD44-212ENST00000524922 KAT7O95251 611 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 PPP1R3DO95685 299 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 ANXA2P07355 339 aaKnown RBP1.94□□□□□ -2.1
CD44-212ENST00000524922 CHRNB1P11230 501 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 ALADP13716 330 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 RHCEP18577 417 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 IGHMBP2P38935 993 aaKnown RBP1.94□□□□□ -2.1
CD44-212ENST00000524922 RFX2P48378 723 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 RFX5P48382 616 aaPredicted RBP1.94□□□□□ -2.1
CD44-212ENST00000524922 VPS41P49754 854 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 PPATQ06203 517 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 LTBQ06643 244 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 Q0VFX4 171 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 PTGR1Q14914 329 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 ASIC2Q16515 512 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 KRTAP24-1Q3LI83 254 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 PLEKHO1Q53GL0 409 aaPredicted RBP1.94□□□□□ -2.1
CD44-212ENST00000524922 EEF1AKMT2Q5JPI9 291 aaKnown RBP1.94□□□□□ -2.1
CD44-212ENST00000524922 LCE1FQ5T754 118 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 RAP1GAP2Q684P5 730 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 CRTC1Q6UUV9 634 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 B4GALNT4Q76KP1 1039 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 TRILQ7L0X0 811 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 SRGAP1Q7Z6B7 1085 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 P3H2Q8IVL5 708 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 IQCF1Q8N6M8 205 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 AGBL3Q8NEM8 1001 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 OR52L2PQ8NGH6 319 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 OR52N4Q8NGI2 321 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 GLMPQ8WWB7 406 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 OIT3Q8WWZ8 545 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 KAT2AQ92830 837 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 NEUROG1Q92886 237 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 PHKBQ93100 1093 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 SLITRK1Q96PX8 696 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 ZNF347Q96SE7 839 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 ELOVL1Q9BW60 279 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 TTLL2Q9BWV7 592 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 NYXQ9GZU5 481 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 FAM204AQ9H8W3 233 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 ZBTB26Q9HCK0 441 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 FZD3Q9NPG1 666 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 MTMR10Q9NXD2 777 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 ZNF212Q9UDV6 495 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 ZNF112Q9UJU3 913 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 OGDHLQ9ULD0 1010 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 VPS4AQ9UN37 437 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 B3GNT3Q9Y2A9 372 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 UBR2Q8IWV8 1755 aa1.94□□□□□ -2.1
CD44-212ENST00000524922 ROCK2O75116 1388 aaKnown RBP1.94□□□□□ -2.1
CD44-212ENST00000524922 AFDNP55196 1824 aaKnown RBP1.94□□□□□ -2.1
CD44-212ENST00000524922 EMSYQ7Z589 1322 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 MYO3BQ8WXR4 1341 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 TPRP12270 2363 aaKnown RBP1.93□□□□□ -2.1
CD44-212ENST00000524922 CACNA1BQ00975 2339 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 A0A1B0GUV1 79 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 ANKRD62A6NC57 917 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 MDM4O15151 490 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 PPP6R2O75170 966 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 WDHD1O75717 1129 aaPredicted RBP1.93□□□□□ -2.1
CD44-212ENST00000524922 BBOX1O75936 387 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 CAMTA2O94983 1202 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 MAP4K4O95819 1239 aaPredicted RBP1.93□□□□□ -2.1
CD44-212ENST00000524922 PLGP00747 810 aaPredicted RBP1.93□□□□□ -2.1
CD44-212ENST00000524922 ENO1P06733 434 aaKnown RBP1.93□□□□□ -2.1
CD44-212ENST00000524922 FGF3P11487 239 aaPredicted RBP1.93□□□□□ -2.1
CD44-212ENST00000524922 TSHRP16473 764 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 IGFBP2P18065 325 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 GABRB3P28472 473 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 FAM193AP78312 1265 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 EGR4Q05215 589 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 DLGAP5Q15398 846 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 ELF2Q15723 593 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 KIAA0753Q2KHM9 967 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 SLC4A8Q2Y0W8 1093 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 PLEKHG6Q3KR16 790 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 INO80DQ53TQ3 878 aaPredicted RBP1.93□□□□□ -2.1
CD44-212ENST00000524922 RRAGBQ5VZM2 374 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 TLDC1Q6P9B6 456 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 DARS2Q6PI48 645 aaKnown RBP1.93□□□□□ -2.1
CD44-212ENST00000524922 CCDC149Q6ZUS6 474 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 RTL10Q7L3V2 364 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 CUZD1Q86UP6 607 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 CCDC28AQ8IWP9 274 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 DDIASQ8IXT1 998 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 SDR16C5Q8N3Y7 309 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 PAQR4Q8N4S7 273 aaPredicted RBP1.93□□□□□ -2.1
CD44-212ENST00000524922 TMEM199Q8N511 208 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 PRR26Q8N8Z3 221 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 SMCR8Q8TEV9 937 aaPredicted RBP1.93□□□□□ -2.1
CD44-212ENST00000524922 NUDCD2Q8WVJ2 157 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 OVCA2Q8WZ82 227 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 PHF21BQ96EK2 531 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 TESK2Q96S53 571 aa1.93□□□□□ -2.1
CD44-212ENST00000524922 UNKQ9C0B0 810 aaKnown RBP1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms