RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, human

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPIDR-223	ENST00000524033	KCNT2	Q6UVM3	1135 aa		8.01	□□□□□ -1.13
SPIDR-223	ENST00000524033	NPNT	Q6UXI9	565 aa		8.01	□□□□□ -1.13
SPIDR-223	ENST00000524033	ACAD11	Q709F0	780 aa		8.01	□□□□□ -1.13
SPIDR-223	ENST00000524033	CYS1	Q717R9	158 aa		8.01	□□□□□ -1.13
SPIDR-223	ENST00000524033	MARK2	Q7KZI7	788 aa	Known RBP	8.01	□□□□□ -1.13
SPIDR-223	ENST00000524033	ARC	Q7LC44	396 aa		8.01	□□□□□ -1.13
SPIDR-223	ENST00000524033	TMC7	Q7Z402	723 aa		8.01	□□□□□ -1.13
SPIDR-223	ENST00000524033	ZC3H18	Q86VM9	953 aa	Known RBP	8.01	□□□□□ -1.13
SPIDR-223	ENST00000524033	CAND1	Q86VP6	1230 aa	Known RBP	8.01	□□□□□ -1.13
SPIDR-223	ENST00000524033	EXOC8	Q8IYI6	725 aa		8.01	□□□□□ -1.13
SPIDR-223	ENST00000524033	PPFIBP2	Q8ND30	876 aa		8.01	□□□□□ -1.13
SPIDR-223	ENST00000524033	C1orf216	Q8TAB5	229 aa		8.01	□□□□□ -1.13
SPIDR-223	ENST00000524033	CXorf38	Q8TB03	319 aa		8.01	□□□□□ -1.13
SPIDR-223	ENST00000524033	RHBDD1	Q8TEB9	315 aa		8.01	□□□□□ -1.13
SPIDR-223	ENST00000524033	PRPF31	Q8WWY3	499 aa	Known RBP	8.01	□□□□□ -1.13
SPIDR-223	ENST00000524033	SLC7A3	Q8WY07	619 aa		8.01	□□□□□ -1.13
SPIDR-223	ENST00000524033	STMN2	Q93045	179 aa		8.01	□□□□□ -1.13
SPIDR-223	ENST00000524033	ZNF558	Q96NG5	402 aa		8.01	□□□□□ -1.13
SPIDR-223	ENST00000524033	RNF157	Q96PX1	679 aa		8.01	□□□□□ -1.13
SPIDR-223	ENST00000524033	CDCA3	Q99618	268 aa	Predicted RBP	8.01	□□□□□ -1.13
SPIDR-223	ENST00000524033	ACO2	Q99798	780 aa	Known RBP	8.01	□□□□□ -1.13
SPIDR-223	ENST00000524033	FDXACB1	Q9BRP7	624 aa	Predicted RBP	8.01	□□□□□ -1.13
SPIDR-223	ENST00000524033	MECR	Q9BV79	373 aa		8.01	□□□□□ -1.13
SPIDR-223	ENST00000524033	MRPL4	Q9BYD3	311 aa	Known RBP	8.01	□□□□□ -1.13
SPIDR-223	ENST00000524033	NGRN	Q9NPE2	291 aa	Known RBP	8.01	□□□□□ -1.13
SPIDR-223	ENST00000524033	ETAA1	Q9NY74	926 aa		8.01	□□□□□ -1.13
SPIDR-223	ENST00000524033	SPG21	Q9NZD8	308 aa		8.01	□□□□□ -1.13
SPIDR-223	ENST00000524033	ARMCX1	Q9P291	453 aa		8.01	□□□□□ -1.13
SPIDR-223	ENST00000524033	SLC7A8	Q9UHI5	535 aa		8.01	□□□□□ -1.13
SPIDR-223	ENST00000524033	BARX2	Q9UMQ3	279 aa	Predicted RBP	8.01	□□□□□ -1.13
SPIDR-223	ENST00000524033	SSX2IP	Q9Y2D8	614 aa		8.01	□□□□□ -1.13
SPIDR-223	ENST00000524033	WDR87	Q6ZQQ6	2873 aa		8.01	□□□□□ -1.13
SPIDR-223	ENST00000524033	SF3B1	O75533	1304 aa	Known RBP eCLIP	8.01	□□□□□ -1.13	3e-8	■■■■■ 109.8
SPIDR-223	ENST00000524033	TRIP11	Q15643	1979 aa		8.01	□□□□□ -1.13
SPIDR-223	ENST00000524033	CIT	O14578	2027 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033		A0A088AWK7	358 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	C2CD4B	A6NLJ0	364 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033		H3BRJ5	948 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033		I3L4J1	428 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	CASQ2	O14958	399 aa	Predicted RBP	8	□□□□□ -1.13
SPIDR-223	ENST00000524033	MED7	O43513	233 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	SMIM24	O75264	130 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	TOM1L1	O75674	476 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	CIB2	O75838	187 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	KRT37	O76014	449 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	MICAL2	O94851	1124 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	GLP2R	O95838	553 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	SRGAP2C	P0DJJ0	459 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	SRGAP2B	P0DMP2	458 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	CYP3A5	P20815	502 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	PRDX6	P30041	224 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	PPM1A	P35813	382 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	PBX3	P40426	434 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	CPA2	P48052	419 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	ZNF143	P52747	638 aa	Predicted RBP	8	□□□□□ -1.13
SPIDR-223	ENST00000524033	XIAP	P98170	497 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	NIPAL4	Q0D2K0	466 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	TFDP2	Q14188	446 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	CHI3L2	Q15782	390 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	DUSP6	Q16828	381 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	DUOXA2	Q1HG44	320 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	SLC5A9	Q2M3M2	681 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	ZNF699	Q32M78	642 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	SEZ6	Q53EL9	994 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	CLLU1OS	Q5K130	101 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	PLPP4	Q5VZY2	271 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	TWF2	Q6IBS0	349 aa	Known RBP	8	□□□□□ -1.13
SPIDR-223	ENST00000524033	IZUMO2	Q6UXV1	221 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	C4orf22	Q6V702	233 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	UNC5A	Q6ZN44	842 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	RNF111	Q6ZNA4	994 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	LYSMD3	Q7Z3D4	306 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	ZNF410	Q86VK4	478 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	PDSS2	Q86YH6	399 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	LRRC43	Q8N309	656 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	ARHGAP18	Q8N392	663 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	PQLC3	Q8N755	202 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	EMC1	Q8N766	993 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	PLD5	Q8N7P1	536 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	MRPL43	Q8N983	215 aa	Known RBP	8	□□□□□ -1.13
SPIDR-223	ENST00000524033	SMRP1	Q8NCR6	262 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	STKLD1	Q8NE28	680 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	SPATA18	Q8TC71	538 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	DTX3L	Q8TDB6	740 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	ACMSD	Q8TDX5	336 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	FAM172A	Q8WUF8	416 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	CFAP36	Q96G28	342 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	SIGLEC10	Q96LC7	697 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	NLRP4	Q96MN2	994 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	HAPLN3	Q96S86	360 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	TCF25	Q9BQ70	676 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	CNPY3	Q9BT09	278 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	C20orf27	Q9GZN8	174 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	ELOVL4	Q9GZR5	314 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	EPB41L1	Q9H4G0	881 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	S100A14	Q9HCY8	104 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	PTPRH	Q9HD43	1115 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	ENTPD7	Q9NQZ7	604 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	RNF19A	Q9NV58	838 aa		8	□□□□□ -1.13
SPIDR-223	ENST00000524033	ASNSD1	Q9NWL6	643 aa		8	□□□□□ -1.13

Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms