RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 ANKRD20A8PQ5CZ79 823 aa13.1□□□□□ -0.31
VEGFA-224ENST00000523873 C9orf64Q5T6V5 341 aa13.1□□□□□ -0.31
VEGFA-224ENST00000523873 AFMIDQ63HM1 303 aa13.1□□□□□ -0.31
VEGFA-224ENST00000523873 TMPRSS6Q8IU80 811 aa13.1□□□□□ -0.31
VEGFA-224ENST00000523873 RHOT1Q8IXI2 618 aa13.1□□□□□ -0.31
VEGFA-224ENST00000523873 PCDH19Q8TAB3 1148 aa13.1□□□□□ -0.31
VEGFA-224ENST00000523873 KRT35Q92764 455 aa13.1□□□□□ -0.31
VEGFA-224ENST00000523873 KCNF1Q9H3M0 494 aa13.1□□□□□ -0.31
VEGFA-224ENST00000523873 RETREG1Q9H6L5 497 aa13.1□□□□□ -0.31
VEGFA-224ENST00000523873 PRDM16Q9HAZ2 1276 aa13.1□□□□□ -0.31
VEGFA-224ENST00000523873 HS3ST2Q9Y278 367 aa13.1□□□□□ -0.31
VEGFA-224ENST00000523873 PCDHGA2Q9Y5H1 932 aa13.1□□□□□ -0.31
VEGFA-224ENST00000523873 CACNA1HO95180 2353 aa13.1□□□□□ -0.31
VEGFA-224ENST00000523873 TP53BP1Q12888 1972 aaPredicted RBP13.1□□□□□ -0.31
VEGFA-224ENST00000523873 EDDM13A0A1B0GTR0 161 aa13.09□□□□□ -0.31
VEGFA-224ENST00000523873 C3orf70A6NLC5 250 aaPredicted RBP13.09□□□□□ -0.31
VEGFA-224ENST00000523873 J3KR12 359 aa13.09□□□□□ -0.31
VEGFA-224ENST00000523873 MFSD11O43934 449 aa13.09□□□□□ -0.31
VEGFA-224ENST00000523873 PALMO75781 387 aa13.09□□□□□ -0.31
VEGFA-224ENST00000523873 PTMAP06454 111 aaKnown RBP13.09□□□□□ -0.31
VEGFA-224ENST00000523873 BCKDHBP21953 392 aa13.09□□□□□ -0.31
VEGFA-224ENST00000523873 ETFBP38117 255 aa13.09□□□□□ -0.31
VEGFA-224ENST00000523873 SERPINH1P50454 418 aaKnown RBP13.09□□□□□ -0.31
VEGFA-224ENST00000523873 ZNF135P52742 658 aaPredicted RBP13.09□□□□□ -0.31
VEGFA-224ENST00000523873 NDST2P52849 883 aa13.09□□□□□ -0.31
VEGFA-224ENST00000523873 YBEYP58557 167 aaPredicted RBP13.09□□□□□ -0.31
VEGFA-224ENST00000523873 RPS14P62263 151 aaKnown RBP13.09□□□□□ -0.31
VEGFA-224ENST00000523873 SERINC3Q13530 473 aa13.09□□□□□ -0.31
VEGFA-224ENST00000523873 PDK2Q15119 407 aa13.09□□□□□ -0.31
VEGFA-224ENST00000523873 PARP15Q460N3 678 aa13.09□□□□□ -0.31
VEGFA-224ENST00000523873 NCBP2-AS2Q69YL0 99 aa13.09□□□□□ -0.31
VEGFA-224ENST00000523873 RETSATQ6NUM9 610 aa13.09□□□□□ -0.31
VEGFA-224ENST00000523873 C22orf39Q6P5X5 142 aa13.09□□□□□ -0.31
VEGFA-224ENST00000523873 TMCO3Q6UWJ1 677 aa13.09□□□□□ -0.31
VEGFA-224ENST00000523873 PRR23BQ6ZRT6 265 aa13.09□□□□□ -0.31
VEGFA-224ENST00000523873 PQLC3Q8N755 202 aa13.09□□□□□ -0.31
VEGFA-224ENST00000523873 KDM1BQ8NB78 822 aa13.09□□□□□ -0.31
VEGFA-224ENST00000523873 CHST14Q8NCH0 376 aa13.09□□□□□ -0.31
VEGFA-224ENST00000523873 LRRN4Q8WUT4 740 aa13.09□□□□□ -0.31
VEGFA-224ENST00000523873 ANP32BQ92688 251 aaKnown RBP13.09□□□□□ -0.31
VEGFA-224ENST00000523873 PDLIM2Q96JY6 352 aa13.09□□□□□ -0.31
VEGFA-224ENST00000523873 ZNF670Q9BS34 389 aa13.09□□□□□ -0.31
VEGFA-224ENST00000523873 FAM126AQ9BYI3 521 aaPredicted RBP13.09□□□□□ -0.31
VEGFA-224ENST00000523873 CYP8B1Q9UNU6 501 aa13.09□□□□□ -0.31
VEGFA-224ENST00000523873 CAPN6Q9Y6Q1 641 aa13.09□□□□□ -0.31
VEGFA-224ENST00000523873 LRRK1Q38SD2 2015 aa13.08□□□□□ -0.31
VEGFA-224ENST00000523873 PLXNA2O75051 1894 aa13.08□□□□□ -0.32
VEGFA-224ENST00000523873 ADAMTS9Q9P2N4 1935 aa13.08□□□□□ -0.32
VEGFA-224ENST00000523873 CCDC163A0A0D9SF12 145 aa13.08□□□□□ -0.32
VEGFA-224ENST00000523873 TARSL2A2RTX5 802 aaKnown RBP13.08□□□□□ -0.32
VEGFA-224ENST00000523873 ARHGAP42A6NI28 874 aa13.08□□□□□ -0.32
VEGFA-224ENST00000523873 RNF103O00237 685 aa13.08□□□□□ -0.32
VEGFA-224ENST00000523873 ZBTB24O43167 697 aaPredicted RBP13.08□□□□□ -0.32
VEGFA-224ENST00000523873 PSTPIP1O43586 416 aa13.08□□□□□ -0.32
VEGFA-224ENST00000523873 ZNF821O75541 412 aaPredicted RBP13.08□□□□□ -0.32
VEGFA-224ENST00000523873 RPP40O75818 363 aaKnown RBP13.08□□□□□ -0.32
VEGFA-224ENST00000523873 NBL1P41271 181 aa13.08□□□□□ -0.32
VEGFA-224ENST00000523873 PSMD8P48556 350 aa13.08□□□□□ -0.32
VEGFA-224ENST00000523873 VASPP50552 380 aaPredicted RBP13.08□□□□□ -0.32
VEGFA-224ENST00000523873 DNA2P51530 1060 aa13.08□□□□□ -0.32
VEGFA-224ENST00000523873 METAP1P53582 386 aa13.08□□□□□ -0.32
VEGFA-224ENST00000523873 MAP7D1Q3KQU3 841 aa13.08□□□□□ -0.32
VEGFA-224ENST00000523873 POM121L1PQ3SYA9 428 aa13.08□□□□□ -0.32
VEGFA-224ENST00000523873 LRRC38Q5VT99 294 aa13.08□□□□□ -0.32
VEGFA-224ENST00000523873 MFSD7Q6UXD7 560 aa13.08□□□□□ -0.32
VEGFA-224ENST00000523873 CEP68Q76N32 757 aa13.08□□□□□ -0.32
VEGFA-224ENST00000523873 MMAAQ8IVH4 418 aaKnown RBP13.08□□□□□ -0.32
VEGFA-224ENST00000523873 LRRC57Q8N9N7 239 aa13.08□□□□□ -0.32
VEGFA-224ENST00000523873 GAB3Q8WWW8 586 aa13.08□□□□□ -0.32
VEGFA-224ENST00000523873 PRCCQ92733 491 aaPredicted RBP13.08□□□□□ -0.32
VEGFA-224ENST00000523873 FAF2Q96CS3 445 aa13.08□□□□□ -0.32
VEGFA-224ENST00000523873 SIPA1Q96FS4 1042 aa13.08□□□□□ -0.32
VEGFA-224ENST00000523873 FAM129BQ96TA1 746 aa13.08□□□□□ -0.32
VEGFA-224ENST00000523873 TM6SF2Q9BZW4 377 aa13.08□□□□□ -0.32
VEGFA-224ENST00000523873 IRF2BPLQ9H1B7 796 aa13.08□□□□□ -0.32
VEGFA-224ENST00000523873 RSPH9Q9H1X1 276 aaPredicted RBP13.08□□□□□ -0.32
VEGFA-224ENST00000523873 PDFQ9HBH1 243 aa13.08□□□□□ -0.32
VEGFA-224ENST00000523873 RCOR3Q9P2K3 495 aaPredicted RBP13.08□□□□□ -0.32
VEGFA-224ENST00000523873 MBD1Q9UIS9 605 aaPredicted RBP13.08□□□□□ -0.32
VEGFA-224ENST00000523873 HPCAL4Q9UM19 191 aa13.08□□□□□ -0.32
VEGFA-224ENST00000523873 GUCA1BQ9UMX6 200 aa13.08□□□□□ -0.32
VEGFA-224ENST00000523873 PACSIN2Q9UNF0 486 aaPredicted RBP13.08□□□□□ -0.32
VEGFA-224ENST00000523873 WDFY4Q6ZS81 3184 aa13.08□□□□□ -0.32
VEGFA-224ENST00000523873 PI4KAP42356 2102 aa13.07□□□□□ -0.32
VEGFA-224ENST00000523873 PLK4O00444 970 aa13.07□□□□□ -0.32
VEGFA-224ENST00000523873 MID1O15344 667 aa13.07□□□□□ -0.32
VEGFA-224ENST00000523873 TMCC1O94876 653 aa13.07□□□□□ -0.32
VEGFA-224ENST00000523873 FTCDO95954 541 aa13.07□□□□□ -0.32
VEGFA-224ENST00000523873 CTSLP07711 333 aa13.07□□□□□ -0.32
VEGFA-224ENST00000523873 CCDC175P0C221 793 aa13.07□□□□□ -0.32
VEGFA-224ENST00000523873 KRT10P13645 584 aa13.07□□□□□ -0.32
VEGFA-224ENST00000523873 GKP32189 559 aa13.07□□□□□ -0.32
VEGFA-224ENST00000523873 P2RY2P41231 377 aa13.07□□□□□ -0.32
VEGFA-224ENST00000523873 CLCN6P51797 869 aa13.07□□□□□ -0.32
VEGFA-224ENST00000523873 DYNLT1P63172 113 aa13.07□□□□□ -0.32
VEGFA-224ENST00000523873 GBE1Q04446 702 aa13.07□□□□□ -0.32
VEGFA-224ENST00000523873 SIM2Q14190 667 aaPredicted RBP13.07□□□□□ -0.32
VEGFA-224ENST00000523873 CYTH1Q15438 398 aa13.07□□□□□ -0.32
VEGFA-224ENST00000523873 ATXN7L2Q5T6C5 722 aaPredicted RBP13.07□□□□□ -0.32
VEGFA-224ENST00000523873 ZNF776Q68DI1 518 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms