RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-223ENST00000523636 NOMO2Q5JPE7 1267 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 ABRAXAS1Q6UWZ7 409 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 SYDE1Q6ZW31 735 aaPredicted RBP5.44□□□□□ -1.54
PABPC1-223ENST00000523636 NEK10Q6ZWH5 1172 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 OSTM1Q86WC4 334 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 RALGPS2Q86X27 583 aaPredicted RBP5.44□□□□□ -1.54
PABPC1-223ENST00000523636 MFSD6LQ8IWD5 586 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 ZNF444Q8N0Y2 327 aaPredicted RBP5.44□□□□□ -1.54
PABPC1-223ENST00000523636 PCYOX1LQ8NBM8 494 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 OR2W6PQ8NHA6 318 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 SLC30A5Q8TAD4 765 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 RLN3Q8WXF3 142 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 USP13Q92995 863 aaPredicted RBP5.44□□□□□ -1.54
PABPC1-223ENST00000523636 ZFYVE19Q96K21 471 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 NT5C1BQ96P26 610 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 MOGAT1Q96PD6 335 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 TSGA13Q96PP4 275 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 GBP4Q96PP9 640 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 FAM193BQ96PV7 902 aaPredicted RBP5.44□□□□□ -1.54
PABPC1-223ENST00000523636 TBCBQ99426 244 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 CLSTN3Q9BQT9 956 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 DESI2Q9BSY9 194 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 TTLL2Q9BWV7 592 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 DEF6Q9H4E7 631 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 TRPV4Q9HBA0 871 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 IL21RQ9HBE5 538 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 SMURF1Q9HCE7 757 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 UBN1Q9NPG3 1134 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 ABCF3Q9NUQ8 709 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 KCTD5Q9NXV2 234 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 UTP6Q9NYH9 597 aaKnown RBP5.44□□□□□ -1.54
PABPC1-223ENST00000523636 ERAP1Q9NZ08 941 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 MTRRQ9UBK8 725 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 CDC23Q9UJX2 597 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 STX8Q9UNK0 236 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 TMEM98Q9Y2Y6 226 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 PCDHB4Q9Y5E5 795 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 PCDHGB6Q9Y5F9 930 aa5.44□□□□□ -1.54
PABPC1-223ENST00000523636 ARHGEF17Q96PE2 2063 aaPredicted RBP5.44□□□□□ -1.54
PABPC1-223ENST00000523636 ZC3H12DA2A288 527 aaKnown RBP5.43□□□□□ -1.54
PABPC1-223ENST00000523636 ZNF503-AS2A6NEH8 195 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 OTOL1A6NHN0 477 aaPredicted RBP5.43□□□□□ -1.54
PABPC1-223ENST00000523636 HEPACAM2A8MVW5 462 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 NUDT19A8MXV4 375 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.43□□□□□ -1.54
PABPC1-223ENST00000523636 K7ENP7 123 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 EIF3FO00303 357 aaPredicted RBP5.43□□□□□ -1.54
PABPC1-223ENST00000523636 ZBED1O96006 694 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 VTNP04004 478 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 SLC3A2P08195 630 aaKnown RBP5.43□□□□□ -1.54
PABPC1-223ENST00000523636 SNHG28P0DPA3 235 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 PDHBP11177 359 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 COL6A2P12110 1019 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 PRF1P14222 555 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 PRPHP41219 470 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 P2RY2P41231 377 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 SCNN1BP51168 640 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 KPNA1P52294 538 aaPredicted RBP5.43□□□□□ -1.54
PABPC1-223ENST00000523636 CRYBB1P53674 252 aaPredicted RBP5.43□□□□□ -1.54
PABPC1-223ENST00000523636 ATXN3P54252 364 aaPredicted RBP5.43□□□□□ -1.54
PABPC1-223ENST00000523636 JAM2P57087 298 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 BTKQ06187 659 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 NEDD9Q14511 834 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 DMC1Q14565 340 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 ODF1Q14990 250 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 ASIC2Q16515 512 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 DUOXA1Q1HG43 343 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 TBC1D25Q3MII6 688 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 PLEKHN1Q494U1 663 aaPredicted RBP5.43□□□□□ -1.54
PABPC1-223ENST00000523636 PRR16Q569H4 304 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 PPM1LQ5SGD2 360 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 FAM205BPQ63HN1 556 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 INO80CQ6PI98 192 aaPredicted RBP5.43□□□□□ -1.54
PABPC1-223ENST00000523636 PRSS55Q6UWB4 352 aaPredicted RBP5.43□□□□□ -1.54
PABPC1-223ENST00000523636 MFSD6Q6ZSS7 791 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 PDZD4Q76G19 769 aaPredicted RBP5.43□□□□□ -1.54
PABPC1-223ENST00000523636 SYT13Q7L8C5 426 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 NLRP14Q86W24 1093 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 VSIG1Q86XK7 387 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 CISD2Q8N5K1 135 aaKnown RBP5.43□□□□□ -1.54
PABPC1-223ENST00000523636 MDGA1Q8NFP4 955 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 GABPB2Q8TAK5 448 aaPredicted RBP5.43□□□□□ -1.54
PABPC1-223ENST00000523636 SH3RF2Q8TEC5 729 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 DEPDC1BQ8WUY9 529 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 SYAP1Q96A49 352 aaPredicted RBP5.43□□□□□ -1.54
PABPC1-223ENST00000523636 GPATCH1Q9BRR8 931 aaKnown RBP5.43□□□□□ -1.54
PABPC1-223ENST00000523636 BOCQ9BWV1 1114 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 ARFGAP3Q9NP61 516 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 NSMCE4AQ9NXX6 385 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 GPRC5BQ9NZH0 403 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 MYOTQ9UBF9 498 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 ASH2LQ9UBL3 628 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 FBXL5Q9UKA1 691 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 ZKSCAN5Q9Y2L8 839 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 PRG3Q9Y2Y8 225 aaPredicted RBP5.43□□□□□ -1.54
PABPC1-223ENST00000523636 ARID2Q68CP9 1835 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 ABCB11O95342 1321 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 NBEAL2Q6ZNJ1 2754 aa5.43□□□□□ -1.54
PABPC1-223ENST00000523636 FLNAP21333 2647 aaKnown RBP5.42□□□□□ -1.54
PABPC1-223ENST00000523636 MXRA5Q9NR99 2828 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms