RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 PDFQ9HBH1 243 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 EPB41L5Q9HCM4 733 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 WHRNQ9P202 907 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 KIAA1522Q9P206 1035 aaPredicted RBP13.34□□□□□ -0.27
CPNE3-205ENST00000522240 TRHDEQ9UKU6 1024 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 RAB21Q9UL25 225 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 OR51B4Q9Y5P0 310 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 KIAA1549LQ6ZVL6 1849 aa13.34□□□□□ -0.27
CPNE3-205ENST00000522240 A0A0D9SEW6 157 aa13.33□□□□□ -0.28
CPNE3-205ENST00000522240 KCNK1O00180 336 aa13.33□□□□□ -0.28
CPNE3-205ENST00000522240 CHADO15335 359 aa13.33□□□□□ -0.28
CPNE3-205ENST00000522240 PEX11BO96011 259 aa13.33□□□□□ -0.28
CPNE3-205ENST00000522240 TYRP14679 529 aa13.33□□□□□ -0.28
CPNE3-205ENST00000522240 RPL22P35268 128 aaKnown RBP13.33□□□□□ -0.28
CPNE3-205ENST00000522240 ACVRL1P37023 503 aa13.33□□□□□ -0.28
CPNE3-205ENST00000522240 CSKP41240 450 aa13.33□□□□□ -0.28
CPNE3-205ENST00000522240 PLK1P53350 603 aa13.33□□□□□ -0.28
CPNE3-205ENST00000522240 LMAN2Q12907 356 aa13.33□□□□□ -0.28
CPNE3-205ENST00000522240 ZBTB17Q13105 803 aa13.33□□□□□ -0.28
CPNE3-205ENST00000522240 HNRNPDQ14103 355 aaKnown RBP13.33□□□□□ -0.28
CPNE3-205ENST00000522240 RFTN1Q14699 578 aaPredicted RBP13.33□□□□□ -0.28
CPNE3-205ENST00000522240 LEXMQ3ZCV2 418 aa13.33□□□□□ -0.28
CPNE3-205ENST00000522240 TMCO4Q5TGY1 634 aa13.33□□□□□ -0.28
CPNE3-205ENST00000522240 RHBDF2Q6PJF5 856 aa13.33□□□□□ -0.28
CPNE3-205ENST00000522240 PARM1Q6UWI2 310 aa13.33□□□□□ -0.28
CPNE3-205ENST00000522240 B4GALNT4Q76KP1 1039 aa13.33□□□□□ -0.28
CPNE3-205ENST00000522240 ZNF354CQ86Y25 554 aa13.33□□□□□ -0.28
CPNE3-205ENST00000522240 YAF2Q8IY57 180 aa13.33□□□□□ -0.28
CPNE3-205ENST00000522240 CPA6Q8N4T0 437 aa13.33□□□□□ -0.28
CPNE3-205ENST00000522240 NSMCE1Q8WV22 266 aa13.33□□□□□ -0.28
CPNE3-205ENST00000522240 FGF14Q92915 247 aa13.33□□□□□ -0.28
CPNE3-205ENST00000522240 ALG14Q96F25 216 aa13.33□□□□□ -0.28
CPNE3-205ENST00000522240 SNF8Q96H20 258 aa13.33□□□□□ -0.28
CPNE3-205ENST00000522240 LMLNQ96KR4 655 aa13.33□□□□□ -0.28
CPNE3-205ENST00000522240 PNKPQ96T60 521 aa13.33□□□□□ -0.28
CPNE3-205ENST00000522240 IL12RB2Q99665 862 aa13.33□□□□□ -0.28
CPNE3-205ENST00000522240 ATP13A1Q9HD20 1204 aa13.33□□□□□ -0.28
CPNE3-205ENST00000522240 HAUS2Q9NVX0 235 aa13.33□□□□□ -0.28
CPNE3-205ENST00000522240 HPCAL4Q9UM19 191 aa13.33□□□□□ -0.28
CPNE3-205ENST00000522240 SHROOM3Q8TF72 1996 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 NUP205Q92621 2012 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 SMAPO00193 183 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 DNALI1O14645 258 aaPredicted RBP13.32□□□□□ -0.28
CPNE3-205ENST00000522240 KDELR3O43731 214 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 SEC31AO94979 1220 aaKnown RBP13.32□□□□□ -0.28
CPNE3-205ENST00000522240 ZSCAN5DPP0CG00 497 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 CCNB1P14635 433 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 ARSAP15289 507 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 IVDP26440 423 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 FDFT1P37268 417 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 RPL21P46778 160 aaKnown RBP13.32□□□□□ -0.28
CPNE3-205ENST00000522240 RENBPP51606 427 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 GEMIN4P57678 1058 aaKnown RBP13.32□□□□□ -0.28
CPNE3-205ENST00000522240 CAV1Q03135 178 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 GPS1Q13098 491 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 CALCOCO2Q13137 446 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 DMC1Q14565 340 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 NAA30Q147X3 362 aaPredicted RBP13.32□□□□□ -0.28
CPNE3-205ENST00000522240 TRIP13Q15645 432 aaPredicted RBP13.32□□□□□ -0.28
CPNE3-205ENST00000522240 SMAD2Q15796 467 aaKnown RBP13.32□□□□□ -0.28
CPNE3-205ENST00000522240 PLEKHG6Q3KR16 790 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 TEX44Q53QW1 395 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 FSCBQ5H9T9 825 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 ANKRD20A2Q5SQ80 823 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 ANKRD20A1Q5TYW2 823 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 ANKRD20A3Q5VUR7 823 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 TRIM68Q6AZZ1 485 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 IL31Q6EBC2 164 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 ITPRIPL1Q6GPH6 555 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 ARHGEF18Q6ZSZ5 1173 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 KIAA0907Q7Z7F0 614 aaPredicted RBP13.32□□□□□ -0.28
CPNE3-205ENST00000522240 PCGF5Q86SE9 256 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 ZNF567Q8N184 647 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 TEX26Q8N6G2 289 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 CCDC110Q8TBZ0 833 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 WFIKKN2Q8TEU8 576 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 LRRN4Q8WUT4 740 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 CASKIN2Q8WXE0 1202 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.32□□□□□ -0.28
CPNE3-205ENST00000522240 BHMTQ93088 406 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 NXPE3Q969Y0 559 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 ACDQ96AP0 544 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 PPP1R2P1Q96PQ5 205 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 XPO6Q96QU8 1125 aaKnown RBP13.32□□□□□ -0.28
CPNE3-205ENST00000522240 KXD1Q9BQD3 176 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 FEM1AQ9BSK4 669 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 C2orf49Q9BVC5 232 aaPredicted RBP13.32□□□□□ -0.28
CPNE3-205ENST00000522240 PHF7Q9BWX1 381 aaPredicted RBP13.32□□□□□ -0.28
CPNE3-205ENST00000522240 TRIM31Q9BZY9 425 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 EPC1Q9H2F5 836 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 DPH5Q9H2P9 285 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 HPS4Q9NQG7 708 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 PLK2Q9NYY3 685 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 GRHL1Q9NZI5 618 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 SEPT10Q9P0V9 454 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 KLHL8Q9P2G9 620 aaPredicted RBP13.32□□□□□ -0.28
CPNE3-205ENST00000522240 IGSF9Q9P2J2 1179 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 VPS28Q9UK41 221 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 FBXO10Q9UK96 956 aa13.32□□□□□ -0.28
CPNE3-205ENST00000522240 NUMBLQ9Y6R0 609 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms