RNA–Protein interactions for RNA: ENST00000522230.1

CKS1BP7-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 7, humanhuman

BASIC

Gene CKS1BP7, Length 235 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP7-201ENST00000522230 UBA5Q9GZZ9 404 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 BRD8Q9H0E9 1235 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 VPS16Q9H269 839 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 GOLPH3LQ9H4A5 285 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 RNF41Q9H4P4 317 aaPredicted RBP2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 ELAC1Q9H777 363 aaKnown RBP2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 KAT14Q9H8E8 782 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 SAP30LQ9HAJ7 183 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 DLL3Q9NYJ7 618 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 EHD3Q9NZN3 535 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 RAB21Q9UL25 225 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 CA14Q9ULX7 337 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 STX8Q9UNK0 236 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 DDX52Q9Y2R4 599 aaKnown RBP eCLIP2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 SCN9AQ15858 1988 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 COL4A5P29400 1685 aa2.97□□□□□ -1.93
CKS1BP7-201ENST00000522230 NAV1Q8NEY1 1877 aa2.96□□□□□ -1.93
CKS1BP7-201ENST00000522230 FAM205AQ6ZU69 1335 aa2.96□□□□□ -1.93
CKS1BP7-201ENST00000522230 ARID1BQ8NFD5 2236 aaPredicted RBP2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 ECM29Q5VYK3 1845 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 C10orf71Q711Q0 1435 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 SNED1Q8TER0 1413 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 GPR75-ASB3A0A0A6YYF3 556 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 GRID2IPA4D2P6 1211 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 DDTLA6NHG4 134 aaPredicted RBP2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 BTBD18B2RXH4 712 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 H0YIZ8 118 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 IRAK2O43187 625 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 NARSO43776 548 aaKnown RBP2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 SH3BP5O60239 455 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 WDHD1O75717 1129 aaPredicted RBP2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 ZNF202O95125 648 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 INSRRP14616 1297 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 GKP32189 559 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 CYP2C18P33260 490 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 ADRA1BP35368 520 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 MPLP40238 635 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 FOLR3P41439 243 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 GSTM5P46439 218 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 TPTEP56180 551 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 ARL4CP56559 192 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 NLRP5P59047 1200 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 HMGN5P82970 282 aaKnown RBP2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 SF3A3Q12874 501 aaKnown RBP eCLIP2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 PTPRRQ15256 657 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 PTPAQ15257 358 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 RPS6KA2Q15349 733 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 ZRSR1Q15695 479 aaKnown RBP2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 TRIM71Q2Q1W2 868 aaKnown RBP2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 KLHL40Q2TBA0 621 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 GALNTL6Q49A17 601 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 PRR16Q569H4 304 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 EARS2Q5JPH6 523 aaKnown RBP2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 L1TD1Q5T7N2 865 aaKnown RBP2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 ZNF618Q5T7W0 954 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 C12orf60Q5U649 245 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 ABHD17BQ5VST6 288 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 FAM90A2PQ658T7 463 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 KAZNQ674X7 775 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 ANKRD40Q6AI12 368 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 APOBEC3HQ6NTF7 200 aaKnown RBP2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 CPLX2Q6PUV4 134 aaKnown RBP2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 C16orf89Q6UX73 402 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 CYP26C1Q6V0L0 522 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 C15orf52Q6ZUT6 534 aaKnown RBP2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 RFX8Q6ZV50 586 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 Q6ZWC4 215 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 IQCA1Q86XH1 822 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 CPOQ8IVL8 374 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 SRBD1Q8N5C6 995 aaKnown RBP2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 CTCFLQ8NI51 663 aaPredicted RBP2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 ACTRT2Q8TDY3 377 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 HMGB4Q8WW32 186 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 GOLGA1Q92805 767 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 CAVIN3Q969G5 261 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 TEKT1Q969V4 418 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 ZNF274Q96GC6 653 aaPredicted RBP2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 PBKQ96KB5 322 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 COG8Q96MW5 612 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 PLIN2Q99541 437 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 ALDH8A1Q9H2A2 487 aaPredicted RBP2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 TSPY26PQ9H489 355 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 CHODLQ9H9P2 273 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 GRPEL1Q9HAV7 217 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 ARHGEF3Q9NR81 526 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 IL17RBQ9NRM6 502 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 SYBUQ9NX95 663 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 KIF17Q9P2E2 1029 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 IFT80Q9P2H3 777 aaPredicted RBP2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 ARPP21Q9UBL0 812 aaPredicted RBP2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 CLIP2Q9UDT6 1046 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 STEAP1Q9UHE8 339 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 GTF2A1LQ9UNN4 478 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 CNTN6Q9UQ52 1028 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 LZTS1Q9Y250 596 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 RCE1Q9Y256 329 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 EPN1Q9Y6I3 576 aaPredicted RBP2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 MAST2Q6P0Q8 1798 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 TIAM2Q8IVF5 1701 aa2.96□□□□□ -1.94
CKS1BP7-201ENST00000522230 NRXN2Q9P2S2 1712 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms