RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 PSMD12O00232 456 aaPredicted RBP14.02□□□□□ -0.16
SYNPO-205ENST00000522122 SYNCRIPO60506 623 aaKnown RBP14.02□□□□□ -0.16
SYNPO-205ENST00000522122 PEX11AO75192 247 aa14.02□□□□□ -0.16
SYNPO-205ENST00000522122 PTPN1P18031 435 aaKnown RBP14.02□□□□□ -0.16
SYNPO-205ENST00000522122 ADORA2AP29274 412 aa14.02□□□□□ -0.16
SYNPO-205ENST00000522122 CCT8P50990 548 aa14.02□□□□□ -0.16
SYNPO-205ENST00000522122 CHN2P52757 468 aa14.02□□□□□ -0.16
SYNPO-205ENST00000522122 UBAP2LQ14157 1087 aaKnown RBP14.02□□□□□ -0.16
SYNPO-205ENST00000522122 ZC3H12AQ5D1E8 599 aaKnown RBP14.02□□□□□ -0.16
SYNPO-205ENST00000522122 LPCAT1Q8NF37 534 aa14.02□□□□□ -0.16
SYNPO-205ENST00000522122 METTL6Q8TCB7 284 aa14.02□□□□□ -0.16
SYNPO-205ENST00000522122 C7orf43Q8WVR3 580 aa14.02□□□□□ -0.16
SYNPO-205ENST00000522122 DDX18Q9NVP1 670 aaKnown RBP14.02□□□□□ -0.16
SYNPO-205ENST00000522122 CKMP06732 381 aa14.02□□□□□ -0.17
SYNPO-205ENST00000522122 GABRB2P47870 512 aa14.02□□□□□ -0.17
SYNPO-205ENST00000522122 PGS1Q32NB8 556 aa14.02□□□□□ -0.17
SYNPO-205ENST00000522122 MARK2Q7KZI7 788 aaKnown RBP14.02□□□□□ -0.17
SYNPO-205ENST00000522122 PIGZQ86VD9 579 aa14.02□□□□□ -0.17
SYNPO-205ENST00000522122 PCDH20Q8N6Y1 951 aaKnown RBP14.02□□□□□ -0.17
SYNPO-205ENST00000522122 ATG16L2Q8NAA4 619 aa14.02□□□□□ -0.17
SYNPO-205ENST00000522122 LMO3Q8TAP4 145 aa14.02□□□□□ -0.17
SYNPO-205ENST00000522122 LHX5Q9H2C1 402 aa14.02□□□□□ -0.17
SYNPO-205ENST00000522122 PCDHB5Q9Y5E4 795 aa14.02□□□□□ -0.17
SYNPO-205ENST00000522122 KPNA6O60684 536 aa14.02□□□□□ -0.17
SYNPO-205ENST00000522122 MRPL28Q13084 256 aaKnown RBP14.02□□□□□ -0.17
SYNPO-205ENST00000522122 DEFB132Q7Z7B7 95 aa14.02□□□□□ -0.17
SYNPO-205ENST00000522122 DHRSXQ8N5I4 330 aa14.02□□□□□ -0.17
SYNPO-205ENST00000522122 OR56A4Q8NGH8 313 aa14.02□□□□□ -0.17
SYNPO-205ENST00000522122 RNPEPQ9H4A4 650 aa14.02□□□□□ -0.17
SYNPO-205ENST00000522122 PLLPQ9Y342 182 aa14.02□□□□□ -0.17
SYNPO-205ENST00000522122 SNCAIPQ9Y6H5 919 aa14.02□□□□□ -0.17
SYNPO-205ENST00000522122 COMMD3-BMI1R4GMX3 469 aa14.02□□□□□ -0.17
SYNPO-205ENST00000522122 A0A087X1B8 175 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 TMEM114B3SHH9 223 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 CWF19L1Q69YN2 538 aaKnown RBP14.01□□□□□ -0.17
SYNPO-205ENST00000522122 TMEM86AQ8N2M4 240 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 ANKRD52Q8NB46 1076 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 MRPS31Q92665 395 aaKnown RBP14.01□□□□□ -0.17
SYNPO-205ENST00000522122 C9orf16Q9BUW7 83 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 C15orf38-AP3S2A0A0A6YYH1 394 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 ITGA2BP08514 1039 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 CCDC159P0C7I6 412 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 COX4I1P13073 169 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 RAB27AP51159 221 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 ARPINQ7Z6K5 226 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 STK32CQ86UX6 486 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 JOSD2Q8TAC2 188 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 RNF145Q96MT1 663 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 ARHGAP28Q9P2N2 729 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 NENFQ9UMX5 172 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 MGAT4DA6NG13 374 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 HDAC3O15379 428 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 NPR3P17342 541 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 BDNFP23560 247 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 ADCYAP1R1P41586 468 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 NOMO1Q15155 1222 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 ANKRD22Q5VYY1 191 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 CLVS1Q8IUQ0 354 aaPredicted RBP14.01□□□□□ -0.17
SYNPO-205ENST00000522122 BHLHE22Q8NFJ8 381 aaPredicted RBP14.01□□□□□ -0.17
SYNPO-205ENST00000522122 PTPRHQ9HD43 1115 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 MPP6Q9NZW5 540 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 COPG2Q9UBF2 871 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 MORF4L1Q9UBU8 362 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 HBS1LQ9Y450 684 aaKnown RBP14.01□□□□□ -0.17
SYNPO-205ENST00000522122 CCDC154A6NI56 674 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 RGS5O15539 181 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 VPS4BO75351 444 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 CPSF4O95639 269 aaKnown RBP14.01□□□□□ -0.17
SYNPO-205ENST00000522122 FCGRTP55899 365 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 EEF1DP3Q658K8 133 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 FIG4Q92562 907 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 COPS5Q92905 334 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 RNF19AQ9NV58 838 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 ZNF180Q9UJW8 692 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 PCDHGC3Q9UN70 934 aa14.01□□□□□ -0.17
SYNPO-205ENST00000522122 A0A087WXM4 84 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 RGSL1A5PLK6 1076 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 CCNT2O60583 730 aaKnown RBP14□□□□□ -0.17
SYNPO-205ENST00000522122 TM7SF2O76062 418 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 LRPAP1P30533 357 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 CYP2C18P33260 490 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 HALP42357 657 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 SERPINH1P50454 418 aaKnown RBP14□□□□□ -0.17
SYNPO-205ENST00000522122 IL5RAQ01344 420 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 MAD2L1Q13257 205 aaPredicted RBP14□□□□□ -0.17
SYNPO-205ENST00000522122 MFSD10Q14728 455 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 YAF2Q8IY57 180 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 ACE2Q9BYF1 805 aaPredicted RBP14□□□□□ -0.17
SYNPO-205ENST00000522122 NMUR2Q9GZQ4 415 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 CPA4Q9UI42 421 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 CRYL1Q9Y2S2 319 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 TSC22D4Q9Y3Q8 395 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 COL22A1Q8NFW1 1626 aaPredicted RBP14□□□□□ -0.17
SYNPO-205ENST00000522122 RAD51BO15315 384 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 TSPAN3O60637 253 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 AVILO75366 819 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 BCL10O95999 233 aa14□□□□□ -0.17
SYNPO-205ENST00000522122 ALOX15P16050 662 aaPredicted RBP14□□□□□ -0.17
SYNPO-205ENST00000522122 ELAVL2Q12926 359 aaKnown RBP14□□□□□ -0.17
SYNPO-205ENST00000522122 RFWD3Q6PCD5 774 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms