RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 ATXN1LP0C7T5 689 aaKnown RBP18.9■□□□□ 0.62
TOP1MT-216ENST00000522121 RRM1P23921 792 aa18.9■□□□□ 0.62
TOP1MT-216ENST00000522121 SDC4P31431 198 aa18.9■□□□□ 0.62
TOP1MT-216ENST00000522121 CHRNA3P32297 505 aa18.9■□□□□ 0.62
TOP1MT-216ENST00000522121 RECQLP46063 649 aaPredicted RBP18.9■□□□□ 0.62
TOP1MT-216ENST00000522121 ARRB1P49407 418 aaPredicted RBP18.9■□□□□ 0.62
TOP1MT-216ENST00000522121 FMO1Q01740 532 aa18.9■□□□□ 0.62
TOP1MT-216ENST00000522121 MYL5Q02045 173 aa18.9■□□□□ 0.62
TOP1MT-216ENST00000522121 AGBL4Q5VU57 503 aa18.9■□□□□ 0.62
TOP1MT-216ENST00000522121 RETSATQ6NUM9 610 aa18.9■□□□□ 0.62
TOP1MT-216ENST00000522121 TRIM69Q86WT6 500 aa18.9■□□□□ 0.62
TOP1MT-216ENST00000522121 EMC1Q8N766 993 aa18.9■□□□□ 0.62
TOP1MT-216ENST00000522121 TMIEQ8NEW7 156 aa18.9■□□□□ 0.62
TOP1MT-216ENST00000522121 NEK11Q8NG66 645 aa18.9■□□□□ 0.62
TOP1MT-216ENST00000522121 SPON2Q9BUD6 331 aa18.9■□□□□ 0.62
TOP1MT-216ENST00000522121 PREBQ9HCU5 417 aa18.9■□□□□ 0.62
TOP1MT-216ENST00000522121 PPARGC1AQ9UBK2 798 aaKnown RBP18.9■□□□□ 0.62
TOP1MT-216ENST00000522121 FTSJ1Q9UET6 329 aa18.9■□□□□ 0.62
TOP1MT-216ENST00000522121 K7ERQ8 282 aa18.89■□□□□ 0.61
TOP1MT-216ENST00000522121 TLR4O00206 839 aa18.89■□□□□ 0.61
TOP1MT-216ENST00000522121 CBX4O00257 560 aa18.89■□□□□ 0.61
TOP1MT-216ENST00000522121 KPNA3O00505 521 aaPredicted RBP18.89■□□□□ 0.61
TOP1MT-216ENST00000522121 WNT9AO14904 365 aa18.89■□□□□ 0.61
TOP1MT-216ENST00000522121 EPHB6O15197 1021 aa18.89■□□□□ 0.61
TOP1MT-216ENST00000522121 MAGEC1O60732 1142 aa18.89■□□□□ 0.61
TOP1MT-216ENST00000522121 ITGAVP06756 1048 aa18.89■□□□□ 0.61
TOP1MT-216ENST00000522121 CHRNB2P17787 502 aa18.89■□□□□ 0.61
TOP1MT-216ENST00000522121 CDK11BP21127 795 aaKnown RBP18.89■□□□□ 0.61
TOP1MT-216ENST00000522121 MAT2AP31153 395 aaKnown RBP18.89■□□□□ 0.61
TOP1MT-216ENST00000522121 NSFP46459 744 aaKnown RBP18.89■□□□□ 0.61
TOP1MT-216ENST00000522121 COPB1P53618 953 aaKnown RBP18.89■□□□□ 0.61
TOP1MT-216ENST00000522121 SLC20A2Q08357 652 aa18.89■□□□□ 0.61
TOP1MT-216ENST00000522121 STAT4Q14765 748 aa18.89■□□□□ 0.61
TOP1MT-216ENST00000522121 SYCP1Q15431 976 aa18.89■□□□□ 0.61
TOP1MT-216ENST00000522121 STX1AQ16623 288 aa18.89■□□□□ 0.61
TOP1MT-216ENST00000522121 CDO1Q16878 200 aa18.89■□□□□ 0.61
TOP1MT-216ENST00000522121 SETMARQ53H47 684 aaPredicted RBP18.89■□□□□ 0.61
TOP1MT-216ENST00000522121 PRAMEF14Q5SWL7 426 aa18.89■□□□□ 0.61
TOP1MT-216ENST00000522121 LINGO4Q6UY18 593 aa18.89■□□□□ 0.61
TOP1MT-216ENST00000522121 OXR1Q8N573 874 aa18.89■□□□□ 0.61
TOP1MT-216ENST00000522121 MFSD2AQ8NA29 543 aa18.89■□□□□ 0.61
TOP1MT-216ENST00000522121 OR2A12Q8NGT7 310 aa18.89■□□□□ 0.61
TOP1MT-216ENST00000522121 SLC30A5Q8TAD4 765 aa18.89■□□□□ 0.61
TOP1MT-216ENST00000522121 C11orf70Q9BRQ4 267 aa18.89■□□□□ 0.61
TOP1MT-216ENST00000522121 ARHGAP20Q9P2F6 1191 aa18.89■□□□□ 0.61
TOP1MT-216ENST00000522121 LIMA1Q9UHB6 759 aaKnown RBP18.89■□□□□ 0.61
TOP1MT-216ENST00000522121 SIK3Q9Y2K2 1263 aa18.89■□□□□ 0.61
TOP1MT-216ENST00000522121 LGALS16A8MUM7 142 aa18.88■□□□□ 0.61
TOP1MT-216ENST00000522121 SMAD6O43541 496 aaKnown RBP18.88■□□□□ 0.61
TOP1MT-216ENST00000522121 NXPH1P58417 271 aa18.88■□□□□ 0.61
TOP1MT-216ENST00000522121 UBXN1Q04323 297 aa18.88■□□□□ 0.61
TOP1MT-216ENST00000522121 OVGP1Q12889 678 aa18.88■□□□□ 0.61
TOP1MT-216ENST00000522121 C22orf39Q6P5X5 142 aa18.88■□□□□ 0.61
TOP1MT-216ENST00000522121 CCNI2Q6ZMN8 369 aaPredicted RBP18.88■□□□□ 0.61
TOP1MT-216ENST00000522121 PHLDB2Q86SQ0 1253 aa18.88■□□□□ 0.61
TOP1MT-216ENST00000522121 IQCHQ86VS3 1027 aa18.88■□□□□ 0.61
TOP1MT-216ENST00000522121 DRC7Q8IY82 874 aa18.88■□□□□ 0.61
TOP1MT-216ENST00000522121 OR7D4Q8NG98 312 aa18.88■□□□□ 0.61
TOP1MT-216ENST00000522121 RXFP2Q8WXD0 754 aa18.88■□□□□ 0.61
TOP1MT-216ENST00000522121 PPP1R16AQ96I34 528 aa18.88■□□□□ 0.61
TOP1MT-216ENST00000522121 ERVMER34-1Q9H9K5 563 aa18.88■□□□□ 0.61
TOP1MT-216ENST00000522121 ATP13A1Q9HD20 1204 aa18.88■□□□□ 0.61
TOP1MT-216ENST00000522121 TOR4AQ9NXH8 423 aa18.88■□□□□ 0.61
TOP1MT-216ENST00000522121 OR12D3Q9UGF7 316 aa18.88■□□□□ 0.61
TOP1MT-216ENST00000522121 PRAMEF26H0Y7S4 382 aa18.87■□□□□ 0.61
TOP1MT-216ENST00000522121 CTSLP07711 333 aa18.87■□□□□ 0.61
TOP1MT-216ENST00000522121 KRT3P12035 628 aa18.87■□□□□ 0.61
TOP1MT-216ENST00000522121 ADRA1BP35368 520 aa18.87■□□□□ 0.61
TOP1MT-216ENST00000522121 ETFBP38117 255 aa18.87■□□□□ 0.61
TOP1MT-216ENST00000522121 PTPN9P43378 593 aa18.87■□□□□ 0.61
TOP1MT-216ENST00000522121 GNA12Q03113 381 aa18.87■□□□□ 0.61
TOP1MT-216ENST00000522121 C15orf59Q2T9L4 293 aaPredicted RBP18.87■□□□□ 0.61
TOP1MT-216ENST00000522121 CCDC14Q49A88 953 aa18.87■□□□□ 0.61
TOP1MT-216ENST00000522121 NEK5Q6P3R8 708 aa18.87■□□□□ 0.61
TOP1MT-216ENST00000522121 GATAD2AQ86YP4 633 aa18.87■□□□□ 0.61
TOP1MT-216ENST00000522121 GALNT15Q8N3T1 639 aa18.87■□□□□ 0.61
TOP1MT-216ENST00000522121 CEP44Q9C0F1 390 aa18.87■□□□□ 0.61
TOP1MT-216ENST00000522121 TNKS2Q9H2K2 1166 aa18.87■□□□□ 0.61
TOP1MT-216ENST00000522121 RETREG1Q9H6L5 497 aa18.87■□□□□ 0.61
TOP1MT-216ENST00000522121 ADAM22Q9P0K1 906 aa18.87■□□□□ 0.61
TOP1MT-216ENST00000522121 NYNRINQ9P2P1 1898 aaKnown RBP18.87■□□□□ 0.61
TOP1MT-216ENST00000522121 IL36AQ9UHA7 158 aa18.87■□□□□ 0.61
TOP1MT-216ENST00000522121 PLXNA2O75051 1894 aa18.86■□□□□ 0.61
TOP1MT-216ENST00000522121 C2CD4BA6NLJ0 364 aa18.86■□□□□ 0.61
TOP1MT-216ENST00000522121 SRRM3A6NNA2 597 aaPredicted RBP18.86■□□□□ 0.61
TOP1MT-216ENST00000522121 RNGTTO60942 597 aaKnown RBP18.86■□□□□ 0.61
TOP1MT-216ENST00000522121 DKK1O94907 266 aa18.86■□□□□ 0.61
TOP1MT-216ENST00000522121 CALB1P05937 261 aa18.86■□□□□ 0.61
TOP1MT-216ENST00000522121 UNGP13051 313 aaPredicted RBP18.86■□□□□ 0.61
TOP1MT-216ENST00000522121 GLDCP23378 1020 aa18.86■□□□□ 0.61
TOP1MT-216ENST00000522121 SERPINH1P50454 418 aaKnown RBP18.86■□□□□ 0.61
TOP1MT-216ENST00000522121 DNA2P51530 1060 aa18.86■□□□□ 0.61
TOP1MT-216ENST00000522121 NRG1Q02297 640 aaPredicted RBP18.86■□□□□ 0.61
TOP1MT-216ENST00000522121 CCDC157Q569K6 752 aa18.86■□□□□ 0.61
TOP1MT-216ENST00000522121 PIP5KL1Q5T9C9 394 aa18.86■□□□□ 0.61
TOP1MT-216ENST00000522121 RWDD4Q6NW29 188 aaKnown RBP18.86■□□□□ 0.61
TOP1MT-216ENST00000522121 STRADAQ7RTN6 431 aa18.86■□□□□ 0.61
TOP1MT-216ENST00000522121 TMPRSS7Q7RTY8 843 aa18.86■□□□□ 0.61
TOP1MT-216ENST00000522121 GRIN3AQ8TCU5 1115 aa18.86■□□□□ 0.61
TOP1MT-216ENST00000522121 SAP25Q8TEE9 199 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms