RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 TPH1P17752 444 aa18.81■□□□□ 0.6
TRAPPC9-210ENST00000521667 KCNQ1P51787 676 aa18.81■□□□□ 0.6
TRAPPC9-210ENST00000521667 HNRNPDQ14103 355 aaKnown RBP18.81■□□□□ 0.6
TRAPPC9-210ENST00000521667 BTG3Q14201 252 aaPredicted RBP18.81■□□□□ 0.6
TRAPPC9-210ENST00000521667 NADSYN1Q6IA69 706 aa18.81■□□□□ 0.6
TRAPPC9-210ENST00000521667 CGB2Q6NT52 195 aa18.81■□□□□ 0.6
TRAPPC9-210ENST00000521667 CCDC121Q6ZUS5 278 aa18.81■□□□□ 0.6
TRAPPC9-210ENST00000521667 FAM47EQ6ZV65 393 aa18.81■□□□□ 0.6
TRAPPC9-210ENST00000521667 CNPY4Q8N129 248 aa18.81■□□□□ 0.6
TRAPPC9-210ENST00000521667 ZNF75CPQ92670 426 aaPredicted RBP18.81■□□□□ 0.6
TRAPPC9-210ENST00000521667 SRPK1Q96SB4 655 aaKnown RBP18.81■□□□□ 0.6
TRAPPC9-210ENST00000521667 NACA2Q9H009 215 aa18.81■□□□□ 0.6
TRAPPC9-210ENST00000521667 IQCGQ9H095 443 aaKnown RBP18.81■□□□□ 0.6
TRAPPC9-210ENST00000521667 CYP4F11Q9HBI6 524 aa18.81■□□□□ 0.6
TRAPPC9-210ENST00000521667 SOX13Q9UN79 622 aa18.81■□□□□ 0.6
TRAPPC9-210ENST00000521667 ZCWPW2A0A1B0GU75 182 aa18.81■□□□□ 0.6
TRAPPC9-210ENST00000521667 DHRS4L1P0CG22 281 aa18.81■□□□□ 0.6
TRAPPC9-210ENST00000521667 CSF2RAP15509 400 aa18.81■□□□□ 0.6
TRAPPC9-210ENST00000521667 HMGA1P17096 107 aaKnown RBP18.81■□□□□ 0.6
TRAPPC9-210ENST00000521667 LAG3P18627 525 aa18.81■□□□□ 0.6
TRAPPC9-210ENST00000521667 TACR2P21452 398 aa18.81■□□□□ 0.6
TRAPPC9-210ENST00000521667 RENBPP51606 427 aa18.81■□□□□ 0.6
TRAPPC9-210ENST00000521667 CMTR2Q8IYT2 770 aaKnown RBP18.81■□□□□ 0.6
TRAPPC9-210ENST00000521667 IPMKQ8NFU5 416 aa18.81■□□□□ 0.6
TRAPPC9-210ENST00000521667 FAM111AQ96PZ2 611 aa18.81■□□□□ 0.6
TRAPPC9-210ENST00000521667 SHROOM3Q8TF72 1996 aa18.8■□□□□ 0.6
TRAPPC9-210ENST00000521667 MYO1CO00159 1063 aa18.8■□□□□ 0.6
TRAPPC9-210ENST00000521667 WDR5P61964 334 aaKnown RBP18.8■□□□□ 0.6
TRAPPC9-210ENST00000521667 HECTD3Q5T447 861 aa18.8■□□□□ 0.6
TRAPPC9-210ENST00000521667 KLHDC10Q6PID8 442 aa18.8■□□□□ 0.6
TRAPPC9-210ENST00000521667 CDHR3Q6ZTQ4 885 aa18.8■□□□□ 0.6
TRAPPC9-210ENST00000521667 MYRFLQ96LU7 910 aa18.8■□□□□ 0.6
TRAPPC9-210ENST00000521667 FICDQ9BVA6 458 aa18.8■□□□□ 0.6
TRAPPC9-210ENST00000521667 SP110Q9HB58 689 aa18.8■□□□□ 0.6
TRAPPC9-210ENST00000521667 CHRAC1Q9NRG0 131 aa18.8■□□□□ 0.6
TRAPPC9-210ENST00000521667 SPG21Q9NZD8 308 aa18.8■□□□□ 0.6
TRAPPC9-210ENST00000521667 IL1RAPL1Q9NZN1 696 aa18.8■□□□□ 0.6
TRAPPC9-210ENST00000521667 TXNDC16Q9P2K2 825 aa18.8■□□□□ 0.6
TRAPPC9-210ENST00000521667 PHTF1Q9UMS5 762 aa18.8■□□□□ 0.6
TRAPPC9-210ENST00000521667 STARD13Q9Y3M8 1113 aa18.8■□□□□ 0.6
TRAPPC9-210ENST00000521667 YIPF1Q9Y548 306 aa18.8■□□□□ 0.6
TRAPPC9-210ENST00000521667 PSAT1Q9Y617 370 aa18.8■□□□□ 0.6
TRAPPC9-210ENST00000521667 NYNRINQ9P2P1 1898 aaKnown RBP18.8■□□□□ 0.6
TRAPPC9-210ENST00000521667 WDR91A4D1P6 747 aa18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 F5H5T6 163 aa18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 J3KR12 359 aa18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 RAMP2O60895 175 aa18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 EFCAB14O75071 495 aa18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 EN2P19622 333 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 ALDH1A3P47895 512 aa18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 MAPKAPK2P49137 400 aa18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 CIR1Q86X95 450 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 MFSD3Q96ES6 412 aa18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 CPNE1Q99829 537 aa18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 ENTPD7Q9NQZ7 604 aa18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 TRPM5Q9NZQ8 1165 aa18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 LTBP2Q14767 1821 aa18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 CCT8L1PA6NM43 557 aa18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 ACSL4O60488 711 aa18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 EDF1O60869 148 aaKnown RBP18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 GJB5O95377 273 aa18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 URODP06132 367 aa18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 ADRA1AP35348 466 aa18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 GP5P40197 560 aa18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 POLD3Q15054 466 aaPredicted RBP18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 SMAD1Q15797 465 aaKnown RBP18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 PARP15Q460N3 678 aa18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 MARC1Q5VT66 337 aa18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 DDX53Q86TM3 631 aaKnown RBP18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 ZNF354CQ86Y25 554 aa18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 NDUFAF2Q8N183 169 aa18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 CCT6BQ92526 530 aa18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 PSMG2Q969U7 264 aa18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 MYEOVQ96EZ4 313 aa18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 KIFC1Q9BW19 673 aa18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 MCOLN1Q9GZU1 580 aa18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 SLC25A51Q9H1U9 297 aa18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 SLCO1B3Q9NPD5 702 aa18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 PCMTD2Q9NV79 361 aa18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 ARL2BPQ9Y2Y0 163 aa18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 PLLPQ9Y342 182 aa18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 LAMA2P24043 3122 aaKnown RBP18.79■□□□□ 0.6
TRAPPC9-210ENST00000521667 CARNS1A5YM72 827 aa18.78■□□□□ 0.6
TRAPPC9-210ENST00000521667 COCHO43405 550 aa18.78■□□□□ 0.6
TRAPPC9-210ENST00000521667 ITGA2BP08514 1039 aa18.78■□□□□ 0.6
TRAPPC9-210ENST00000521667 ACRP10323 421 aa18.78■□□□□ 0.6
TRAPPC9-210ENST00000521667 OR1E1P30953 314 aa18.78■□□□□ 0.6
TRAPPC9-210ENST00000521667 HARS2P49590 506 aaKnown RBP18.78■□□□□ 0.6
TRAPPC9-210ENST00000521667 YBEYP58557 167 aaPredicted RBP18.78■□□□□ 0.6
TRAPPC9-210ENST00000521667 MPP3Q13368 585 aa18.78■□□□□ 0.6
TRAPPC9-210ENST00000521667 RAB33AQ14088 237 aa18.78■□□□□ 0.6
TRAPPC9-210ENST00000521667 TAF12Q16514 161 aa18.78■□□□□ 0.6
TRAPPC9-210ENST00000521667 C5orf22Q49AR2 442 aa18.78■□□□□ 0.6
TRAPPC9-210ENST00000521667 GRTP1Q5TC63 336 aa18.78■□□□□ 0.6
TRAPPC9-210ENST00000521667 DENND5AQ6IQ26 1287 aa18.78■□□□□ 0.6
TRAPPC9-210ENST00000521667 LGI2Q8N0V4 545 aa18.78■□□□□ 0.6
TRAPPC9-210ENST00000521667 ACMSDQ8TDX5 336 aa18.78■□□□□ 0.6
TRAPPC9-210ENST00000521667 NSMCE1Q8WV22 266 aa18.78■□□□□ 0.6
TRAPPC9-210ENST00000521667 PABPC5Q96DU9 382 aaKnown RBP18.78■□□□□ 0.6
TRAPPC9-210ENST00000521667 FSD1LQ9BXM9 530 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms