RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 LNP1A1A4G5 178 aa21.1■□□□□ 0.97
TRIM35-203ENST00000521253 METTL12A8MUP2 240 aa21.1■□□□□ 0.97
TRIM35-203ENST00000521253 MEI4A8MW99 385 aa21.1■□□□□ 0.97
TRIM35-203ENST00000521253 WASH4PA8MWX3 477 aa21.1■□□□□ 0.97
TRIM35-203ENST00000521253 MCF2LO15068 1137 aa21.1■□□□□ 0.97
TRIM35-203ENST00000521253 BNIP3LO60238 219 aa21.1■□□□□ 0.97
TRIM35-203ENST00000521253 SEMA4FO95754 770 aa21.1■□□□□ 0.97
TRIM35-203ENST00000521253 ADH1BP00325 375 aa21.1■□□□□ 0.97
TRIM35-203ENST00000521253 MAOBP27338 520 aa21.1■□□□□ 0.97
TRIM35-203ENST00000521253 HTR7P34969 479 aa21.1■□□□□ 0.97
TRIM35-203ENST00000521253 SERPINH1P50454 418 aaKnown RBP21.1■□□□□ 0.97
TRIM35-203ENST00000521253 TPI1P60174 286 aa21.1■□□□□ 0.97
TRIM35-203ENST00000521253 ACAP1Q15027 740 aa21.1■□□□□ 0.97
TRIM35-203ENST00000521253 POLD3Q15054 466 aaPredicted RBP21.1■□□□□ 0.97
TRIM35-203ENST00000521253 TRIM61Q5EBN2 209 aa21.1■□□□□ 0.97
TRIM35-203ENST00000521253 WDR45BQ5MNZ6 344 aa21.1■□□□□ 0.97
TRIM35-203ENST00000521253 DCAF12L1Q5VU92 463 aa21.1■□□□□ 0.97
TRIM35-203ENST00000521253 C22orf39Q6P5X5 142 aa21.1■□□□□ 0.97
TRIM35-203ENST00000521253 GAS2L3Q86XJ1 694 aa21.1■□□□□ 0.97
TRIM35-203ENST00000521253 CNGA4Q8IV77 575 aa21.1■□□□□ 0.97
TRIM35-203ENST00000521253 RGL4Q8IZJ4 473 aa21.1■□□□□ 0.97
TRIM35-203ENST00000521253 AADATQ8N5Z0 425 aa21.1■□□□□ 0.97
TRIM35-203ENST00000521253 NETO1Q8TDF5 533 aa21.1■□□□□ 0.97
TRIM35-203ENST00000521253 KCTD15Q96SI1 283 aaPredicted RBP21.1■□□□□ 0.97
TRIM35-203ENST00000521253 OMDQ99983 421 aa21.1■□□□□ 0.97
TRIM35-203ENST00000521253 NCAPGQ9BPX3 1015 aa21.1■□□□□ 0.97
TRIM35-203ENST00000521253 C6orf106Q9H6K1 298 aaPredicted RBP21.1■□□□□ 0.97
TRIM35-203ENST00000521253 CATSPERBQ9H7T0 1116 aa21.1■□□□□ 0.97
TRIM35-203ENST00000521253 SGK2Q9HBY8 427 aa21.1■□□□□ 0.97
TRIM35-203ENST00000521253 DLL3Q9NYJ7 618 aa21.1■□□□□ 0.97
TRIM35-203ENST00000521253 EVLQ9UI08 416 aaPredicted RBP21.1■□□□□ 0.97
TRIM35-203ENST00000521253 CDV3Q9UKY7 258 aaKnown RBP21.1■□□□□ 0.97
TRIM35-203ENST00000521253 SARDHQ9UL12 918 aa21.1■□□□□ 0.97
TRIM35-203ENST00000521253 ACTL7AQ9Y615 435 aa21.1■□□□□ 0.97
TRIM35-203ENST00000521253 NUP205Q92621 2012 aa21.09■□□□□ 0.97
TRIM35-203ENST00000521253 EIF3CLB5ME19 914 aaKnown RBP21.09■□□□□ 0.97
TRIM35-203ENST00000521253 AKR1B15C9JRZ8 316 aaPredicted RBP21.09■□□□□ 0.97
TRIM35-203ENST00000521253 ALOX15BO15296 676 aa21.09■□□□□ 0.97
TRIM35-203ENST00000521253 FGF10O15520 208 aaPredicted RBP21.09■□□□□ 0.97
TRIM35-203ENST00000521253 AKR1B10O60218 316 aa21.09■□□□□ 0.97
TRIM35-203ENST00000521253 RNASEH2AO75792 299 aaKnown RBP21.09■□□□□ 0.97
TRIM35-203ENST00000521253 CD160O95971 181 aa21.09■□□□□ 0.97
TRIM35-203ENST00000521253 TCF4P15884 667 aa21.09■□□□□ 0.97
TRIM35-203ENST00000521253 C5AR1P21730 350 aa21.09■□□□□ 0.97
TRIM35-203ENST00000521253 IL1R2P27930 398 aa21.09■□□□□ 0.97
TRIM35-203ENST00000521253 METAP1P53582 386 aa21.09■□□□□ 0.97
TRIM35-203ENST00000521253 IRX4P78413 519 aa21.09■□□□□ 0.97
TRIM35-203ENST00000521253 SLC20A2Q08357 652 aa21.09■□□□□ 0.97
TRIM35-203ENST00000521253 SFSWAPQ12872 951 aaKnown RBP21.09■□□□□ 0.97
TRIM35-203ENST00000521253 PIGHQ14442 188 aaPredicted RBP21.09■□□□□ 0.97
TRIM35-203ENST00000521253 DSG4Q86SJ6 1040 aa21.09■□□□□ 0.97
TRIM35-203ENST00000521253 PSTKQ8IV42 348 aaKnown RBP21.09■□□□□ 0.97
TRIM35-203ENST00000521253 OR2A12Q8NGT7 310 aa21.09■□□□□ 0.97
TRIM35-203ENST00000521253 DNASE2BQ8WZ79 361 aa21.09■□□□□ 0.97
TRIM35-203ENST00000521253 EIF3CQ99613 913 aaKnown RBP21.09■□□□□ 0.97
TRIM35-203ENST00000521253 PACSIN1Q9BY11 444 aa21.09■□□□□ 0.97
TRIM35-203ENST00000521253 PCED1AQ9H1Q7 454 aa21.09■□□□□ 0.97
TRIM35-203ENST00000521253 NEUROG2Q9H2A3 272 aa21.09■□□□□ 0.97
TRIM35-203ENST00000521253 TNKS2Q9H2K2 1166 aa21.09■□□□□ 0.97
TRIM35-203ENST00000521253 PPM1HQ9ULR3 514 aa21.09■□□□□ 0.97
TRIM35-203ENST00000521253 TNRC6BQ9UPQ9 1833 aaKnown RBP21.08■□□□□ 0.97
TRIM35-203ENST00000521253 NUMA1Q14980 2115 aa21.08■□□□□ 0.97
TRIM35-203ENST00000521253 EEF2KO00418 725 aaKnown RBP21.08■□□□□ 0.97
TRIM35-203ENST00000521253 ZNF821O75541 412 aaPredicted RBP21.08■□□□□ 0.97
TRIM35-203ENST00000521253 CFIP05156 583 aa21.08■□□□□ 0.97
TRIM35-203ENST00000521253 DUOXA1Q1HG43 343 aa21.08■□□□□ 0.97
TRIM35-203ENST00000521253 SLC23A3Q6PIS1 610 aa21.08■□□□□ 0.97
TRIM35-203ENST00000521253 HDDC3Q8N4P3 179 aa21.08■□□□□ 0.97
TRIM35-203ENST00000521253 NIPA2Q8N8Q9 360 aa21.08■□□□□ 0.97
TRIM35-203ENST00000521253 CEP76Q8TAP6 659 aa21.08■□□□□ 0.97
TRIM35-203ENST00000521253 ZNF564Q8TBZ8 553 aaPredicted RBP21.08■□□□□ 0.97
TRIM35-203ENST00000521253 CCDC114Q96M63 670 aa21.08■□□□□ 0.97
TRIM35-203ENST00000521253 CCDC42Q96M95 316 aa21.08■□□□□ 0.97
TRIM35-203ENST00000521253 EDEM2Q9BV94 578 aa21.08■□□□□ 0.97
TRIM35-203ENST00000521253 CEP44Q9C0F1 390 aa21.08■□□□□ 0.97
TRIM35-203ENST00000521253 NHEJ1Q9H9Q4 299 aaPredicted RBP21.08■□□□□ 0.97
TRIM35-203ENST00000521253 IP6K2Q9UHH9 426 aa21.08■□□□□ 0.97
TRIM35-203ENST00000521253 FZD4Q9ULV1 537 aa21.08■□□□□ 0.97
TRIM35-203ENST00000521253 HPCAL4Q9UM19 191 aa21.08■□□□□ 0.97
TRIM35-203ENST00000521253 FCF1Q9Y324 198 aaKnown RBP21.08■□□□□ 0.97
TRIM35-203ENST00000521253 CXorf51AA0A1B0GTR3 108 aa21.07■□□□□ 0.96
TRIM35-203ENST00000521253 MYO1FO00160 1098 aa21.07■□□□□ 0.96
TRIM35-203ENST00000521253 CTSLP07711 333 aa21.07■□□□□ 0.96
TRIM35-203ENST00000521253 GOT1P17174 413 aa21.07■□□□□ 0.96
TRIM35-203ENST00000521253 SDHBP21912 280 aa21.07■□□□□ 0.96
TRIM35-203ENST00000521253 DRD3P35462 400 aa21.07■□□□□ 0.96
TRIM35-203ENST00000521253 PUM1Q14671 1186 aaKnown RBP eCLIP21.07■□□□□ 0.96
TRIM35-203ENST00000521253 SMTNL2Q2TAL5 461 aa21.07■□□□□ 0.96
TRIM35-203ENST00000521253 POM121L1PQ3SYA9 428 aa21.07■□□□□ 0.96
TRIM35-203ENST00000521253 PPP6R3Q5H9R7 873 aaPredicted RBP21.07■□□□□ 0.96
TRIM35-203ENST00000521253 KCNT1Q5JUK3 1230 aa21.07■□□□□ 0.96
TRIM35-203ENST00000521253 FAM46CQ5VWP2 391 aa21.07■□□□□ 0.96
TRIM35-203ENST00000521253 LEKR1Q6ZMV7 388 aa21.07■□□□□ 0.96
TRIM35-203ENST00000521253 RABEPKQ7Z6M1 372 aa21.07■□□□□ 0.96
TRIM35-203ENST00000521253 UMODL1-AS1Q8N2C9 162 aa21.07■□□□□ 0.96
TRIM35-203ENST00000521253 PIP4K2CQ8TBX8 421 aa21.07■□□□□ 0.96
TRIM35-203ENST00000521253 CTNNBL1Q8WYA6 563 aaPredicted RBP21.07■□□□□ 0.96
TRIM35-203ENST00000521253 HMCESQ96FZ2 354 aa21.07■□□□□ 0.96
TRIM35-203ENST00000521253 NUSAP1Q9BXS6 441 aaKnown RBP21.07■□□□□ 0.96
TRIM35-203ENST00000521253 SPTLC3Q9NUV7 552 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms