RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 ARHGEF6Q15052 776 aa11.56□□□□□ -0.56
CLK4-206ENST00000520878 POLD3Q15054 466 aaPredicted RBP11.56□□□□□ -0.56
CLK4-206ENST00000520878 CLLU1OSQ5K130 101 aa11.56□□□□□ -0.56
CLK4-206ENST00000520878 CLNKQ7Z7G1 428 aa11.56□□□□□ -0.56
CLK4-206ENST00000520878 MRPL10Q7Z7H8 261 aaKnown RBP11.56□□□□□ -0.56
CLK4-206ENST00000520878 SLC41A1Q8IVJ1 513 aa11.56□□□□□ -0.56
CLK4-206ENST00000520878 C10orf82Q8WW14 230 aa11.56□□□□□ -0.56
CLK4-206ENST00000520878 IRGQQ8WZA9 623 aa11.56□□□□□ -0.56
CLK4-206ENST00000520878 NDNQ99608 321 aa11.56□□□□□ -0.56
CLK4-206ENST00000520878 ARL8BQ9NVJ2 186 aa11.56□□□□□ -0.56
CLK4-206ENST00000520878 ZNF180Q9UJW8 692 aa11.56□□□□□ -0.56
CLK4-206ENST00000520878 SLC12A4Q9UP95 1085 aa11.56□□□□□ -0.56
CLK4-206ENST00000520878 PLXNB2O15031 1838 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 TLR5O60602 858 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 CCDC22O60826 627 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 CNTN5O94779 1100 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 SLC18A2Q05940 514 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 NAA25Q14CX7 972 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 PLEKHG4Q58EX7 1191 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 SDCCAG8Q86SQ7 713 aaPredicted RBP11.55□□□□□ -0.56
CLK4-206ENST00000520878 RTN4RL1Q86UN2 441 aaPredicted RBP11.55□□□□□ -0.56
CLK4-206ENST00000520878 EFHBQ8N7U6 833 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 BRD8Q9H0E9 1235 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 PNPOQ9NVS9 261 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 HS3ST4Q9Y661 456 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 PRRG1O14668 218 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 CFLARO15519 480 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 B4GALT3O60512 393 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 RASSF9O75901 435 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 CRHR1P34998 444 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 PLK1P53350 603 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 WNT3AP56704 352 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 MPP1Q00013 466 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 USP4Q13107 963 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 BRMS1LQ5PSV4 323 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 BBS5Q8N3I7 341 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 GABPB2Q8TAK5 448 aaPredicted RBP11.55□□□□□ -0.56
CLK4-206ENST00000520878 AGAP11Q8TF27 550 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 CREBZFQ9NS37 354 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 USP3Q9Y6I4 520 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 E9PBE3 544 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 J3KR12 359 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 TIMM44O43615 452 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 KLHL41O60662 606 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 SELPP16109 830 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 CD68P34810 354 aaPredicted RBP11.55□□□□□ -0.56
CLK4-206ENST00000520878 SCNN1BP51168 640 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 RENBPP51606 427 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 NEK3P51956 506 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 IRF9Q00978 393 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 CSHL1Q14406 222 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 VWA5B1Q5TIE3 1220 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 C16orf59Q7L2K0 433 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 ARHGAP24Q8N264 748 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 LZTR1Q8N653 840 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 CNTD1Q8N815 330 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 PSMG2Q969U7 264 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 HDAC11Q96DB2 347 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 MLPHQ9BV36 600 aaPredicted RBP11.55□□□□□ -0.56
CLK4-206ENST00000520878 FTHL17Q9BXU8 183 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 THAP1Q9NVV9 213 aa11.55□□□□□ -0.56
CLK4-206ENST00000520878 LOC285556D6RIA3 1793 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 KCNU1A8MYU2 1149 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 FAM155AB1AL88 458 aaPredicted RBP11.54□□□□□ -0.56
CLK4-206ENST00000520878 PSMD3O43242 534 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 EOMESO95936 686 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 ALDOAP04075 364 aaKnown RBP11.54□□□□□ -0.56
CLK4-206ENST00000520878 HARS2P49590 506 aaKnown RBP11.54□□□□□ -0.56
CLK4-206ENST00000520878 DSC2Q02487 901 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 GRM3Q14832 879 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 TIGD7Q6NT04 549 aaPredicted RBP11.54□□□□□ -0.56
CLK4-206ENST00000520878 FUT10Q6P4F1 479 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 FAM171BQ6P995 826 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 KCTD4Q8WVF5 259 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 ARNTL2Q8WYA1 636 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 HMCESQ96FZ2 354 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 PRR11Q96HE9 360 aaPredicted RBP11.54□□□□□ -0.56
CLK4-206ENST00000520878 DHRS4Q9BTZ2 278 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 ZYG11BQ9C0D3 744 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 CCSER2Q9H7U1 834 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 NMRAL1Q9HBL8 299 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 SSU72Q9NP77 194 aaKnown RBP11.54□□□□□ -0.56
CLK4-206ENST00000520878 PNPLA8Q9NP80 782 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 TMEM51Q9NW97 253 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 DONSONQ9NYP3 566 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 CRYL1Q9Y2S2 319 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 MAGEB16A2A368 324 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 ERI2A8K979 691 aaKnown RBP11.54□□□□□ -0.56
CLK4-206ENST00000520878 MEI4A8MW99 385 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 ZNF487B1APH4 448 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 F5H5T6 163 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 CBX4O00257 560 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 ITM2AO43736 263 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 HLA-DQB2P05538 268 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 FAM163BP0C2L3 166 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 TYMPP19971 482 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 NAGLUP54802 743 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 GALNT2Q10471 571 aa11.54□□□□□ -0.56
CLK4-206ENST00000520878 UBAP2LQ14157 1087 aaKnown RBP11.54□□□□□ -0.56
CLK4-206ENST00000520878 KYAT3Q6YP21 454 aaKnown RBP11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms