RNA–Protein interactions for RNA: ENST00000520337.1

CTHRC1-203, Transcript of collagen triple helix repeat containing 1, humanhuman

TSL 1 (best) BASIC

Gene CTHRC1, Length 1,198 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTHRC1-203ENST00000520337 RAB21Q9UL25 225 aa8.12□□□□□ -1.11
CTHRC1-203ENST00000520337 MTUS1Q9ULD2 1270 aa8.12□□□□□ -1.11
CTHRC1-203ENST00000520337 YBX2Q9Y2T7 364 aaKnown RBP8.12□□□□□ -1.11
CTHRC1-203ENST00000520337 RWDD3Q9Y3V2 267 aa8.12□□□□□ -1.11
CTHRC1-203ENST00000520337 YIPF1Q9Y548 306 aa8.12□□□□□ -1.11
CTHRC1-203ENST00000520337 PCDHA11Q9Y5I1 949 aa8.12□□□□□ -1.11
CTHRC1-203ENST00000520337 AK5Q9Y6K8 562 aa8.12□□□□□ -1.11
CTHRC1-203ENST00000520337 CHD9Q3L8U1 2897 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 MYOFQ9NZM1 2061 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 SYNJ2BP-COX16A0A087WUM0 186 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 GOLGA6L10A0A0M3HER8 536 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 KCNU1A8MYU2 1149 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 IRAK2O43187 625 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 TGM5O43548 720 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 CST8O60676 142 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 TBX18O95935 607 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 CA3P07451 260 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 RARGP13631 454 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 CHRNA3P32297 505 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 COILP38432 576 aaPredicted RBP8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 CETN2P41208 172 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 KCNJ1P48048 391 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 CLCN7P51798 805 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 AIF1P55008 147 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 ERVK-21P61565 698 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 TWF1Q12792 350 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 SEMA3BQ13214 749 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 INPP5AQ14642 412 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 BRD3Q15059 726 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 KCTD19Q17RG1 926 aaPredicted RBP8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 ANKRD20A8PQ5CZ79 823 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 ZFYVE27Q5T4F4 411 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 OGFOD2Q6N063 350 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 C8orf74Q6P047 294 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 UBE3DQ7Z6J8 389 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 DNAJB7Q7Z6W7 309 aaPredicted RBP8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 MAP7D3Q8IWC1 876 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 PCDH19Q8TAB3 1148 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 MAIP1Q8WWC4 291 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 ATG4AQ8WYN0 398 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 SLCO2A1Q92959 643 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 TRMT2BQ96GJ1 504 aaKnown RBP8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 SLC39A13Q96H72 371 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 RNF157Q96PX1 679 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 GDF15Q99988 308 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 CALN1Q9BXU9 219 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 WNT10AQ9GZT5 417 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 DHX35Q9H5Z1 703 aaKnown RBP8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 FAM204AQ9H8W3 233 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 TLR9Q9NR96 1032 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 TLR8Q9NR97 1041 aaKnown RBP8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 ZNF446Q9NWS9 450 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 ARHGEF38Q9NXL2 777 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 CWC15Q9P013 229 aaKnown RBP8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 COX16Q9P0S2 106 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 SFMBT1Q9UHJ3 866 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 AMACRQ9UHK6 382 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 NEU2Q9Y3R4 380 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 INSL5Q9Y5Q6 135 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 C2orf16Q68DN1 1984 aa8.11□□□□□ -1.11
CTHRC1-203ENST00000520337 CHD7Q9P2D1 2997 aa8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 PRAMEF27A3QJZ7 478 aa8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 ZNF840PA6NDX5 716 aa8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 ZSCAN5CA6NGD5 496 aaPredicted RBP8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 FAM72CH0Y354 149 aa8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 PRRG1O14668 218 aa8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 TTI1O43156 1089 aa8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 MSI1O43347 362 aaKnown RBP8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 LIASO43766 372 aa8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 IGLV3-27P01718 113 aa8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 RNASE1P07998 156 aaKnown RBP8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 CSH1P0DML2 217 aa8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 CSH2P0DML3 217 aa8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 PECAM1P16284 738 aaPredicted RBP8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 GBP1P32455 592 aa8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 ELF1P32519 619 aa8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 ALDH1A3P47895 512 aa8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 FNTAP49354 379 aa8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 EPHB3P54753 998 aa8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 VSNL1P62760 191 aa8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 SNX1Q13596 522 aa8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 DPYSQ14117 519 aa8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 KRT81Q14533 505 aa8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 PPP2R5DQ14738 602 aa8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 TRADDQ15628 312 aa8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 CCDC85BQ15834 202 aaPredicted RBP8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 ODF2Q5BJF6 829 aa8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 PPP6R3Q5H9R7 873 aaPredicted RBP8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 FAM72AQ5TYM5 149 aa8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 PLPP4Q5VZY2 271 aa8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 SLC9A4Q6AI14 798 aa8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 FAM72DQ6L9T8 149 aa8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 WDR93Q6P2C0 686 aa8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 DRICH1Q6PGQ1 229 aaPredicted RBP8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 SLC23A3Q6PIS1 610 aa8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 CCDC137Q6PK04 289 aaKnown RBP8.1□□□□□ -1.11
CTHRC1-203ENST00000520337 TMEM150AQ86TG1 271 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms