RNA–Protein interactions for RNA: ENST00000520166.5

TSNARE1-205, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSNARE1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-205ENST00000520166 VPS28Q9UK41 221 aa17.36■□□□□ 0.37
TSNARE1-205ENST00000520166 KIF26AQ9ULI4 1882 aaPredicted RBP17.36■□□□□ 0.37
TSNARE1-205ENST00000520166 C5orf60A6NFR6 353 aa17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 ARNTLO00327 626 aa17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 KDELR3O43731 214 aa17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 ECI2O75521 394 aa17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 GCATO75600 419 aa17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 HLA-DQB2P05538 268 aa17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 CISD3P0C7P0 127 aa17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 OXCT1P55809 520 aa17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 MAXP61244 160 aa17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 LMNB2Q03252 620 aa17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 OLIG2Q13516 323 aa17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 GEN1Q17RS7 908 aa17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 ZDHHC24Q6UX98 284 aa17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 PID1Q7Z2X4 250 aa17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 RNF135Q8IUD6 432 aa17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 GPR161Q8N6U8 529 aaKnown RBP17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 SORCS1Q8WY21 1168 aa17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 SEC14L1Q92503 715 aa17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 NSMCE3Q96MG7 304 aa17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 RUNDC3BQ96NL0 473 aa17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 SP110Q9HB58 689 aa17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 ETNK1Q9HBU6 452 aa17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 RBM22Q9NW64 420 aaKnown RBP eCLIP17.35■□□□□ 0.377e-7■■■■■ 27.3
TSNARE1-205ENST00000520166 THG1LQ9NWX6 298 aaKnown RBP17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 FEZ2Q9UHY8 353 aaPredicted RBP17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 VPS51Q9UID3 782 aa17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 UTP11Q9Y3A2 253 aaKnown RBP17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 MYO18AQ92614 2054 aaKnown RBP17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 A0A0A0MRY4 1105 aa17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 MTM1Q13496 603 aa17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 RUNX3Q13761 415 aa17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 SMAD2Q15796 467 aaKnown RBP17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 TEX44Q53QW1 395 aa17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 PTCRAQ6ISU1 281 aaPredicted RBP17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 YAF2Q8IY57 180 aa17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 MAML1Q92585 1016 aa17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 RPL10LQ96L21 214 aaKnown RBP17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 SPATA13Q96N96 652 aa17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 TRMT61BQ9BVS5 477 aaKnown RBP17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 UBP1Q9NZI7 540 aa17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 NFU1Q9UMS0 254 aa17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 TTLL3Q9Y4R7 772 aa17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 TRIOO75962 3097 aa17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 COL4A3Q01955 1670 aa17.35■□□□□ 0.37
TSNARE1-205ENST00000520166 CFAP69A5D8W1 941 aa17.34■□□□□ 0.37
TSNARE1-205ENST00000520166 SMAD6O43541 496 aaKnown RBP17.34■□□□□ 0.37
TSNARE1-205ENST00000520166 TULP3O75386 442 aa17.34■□□□□ 0.37
TSNARE1-205ENST00000520166 FAM153BP0C7A2 387 aa17.34■□□□□ 0.37
TSNARE1-205ENST00000520166 PSMB4P28070 264 aa17.34■□□□□ 0.37
TSNARE1-205ENST00000520166 RGRP47804 291 aa17.34■□□□□ 0.37
TSNARE1-205ENST00000520166 STK19P49842 368 aaPredicted RBP17.34■□□□□ 0.37
TSNARE1-205ENST00000520166 ITGA8P53708 1063 aa17.34■□□□□ 0.37
TSNARE1-205ENST00000520166 IL10RBQ08334 325 aa17.34■□□□□ 0.37
TSNARE1-205ENST00000520166 CYTH1Q15438 398 aa17.34■□□□□ 0.37
TSNARE1-205ENST00000520166 PLEKHG6Q3KR16 790 aa17.34■□□□□ 0.37
TSNARE1-205ENST00000520166 LEXMQ3ZCV2 418 aa17.34■□□□□ 0.37
TSNARE1-205ENST00000520166 FAM153CQ494X1 144 aa17.34■□□□□ 0.37
TSNARE1-205ENST00000520166 PITRM1Q5JRX3 1037 aa17.34■□□□□ 0.37
TSNARE1-205ENST00000520166 ADIPOR2Q86V24 386 aa17.34■□□□□ 0.37
TSNARE1-205ENST00000520166 ETFBKMTQ8IXQ9 262 aa17.34■□□□□ 0.37
TSNARE1-205ENST00000520166 ATP2A3Q93084 1043 aa17.34■□□□□ 0.37
TSNARE1-205ENST00000520166 TEKT5Q96M29 485 aa17.34■□□□□ 0.37
TSNARE1-205ENST00000520166 IL12RB2Q99665 862 aa17.34■□□□□ 0.37
TSNARE1-205ENST00000520166 PHF7Q9BWX1 381 aaPredicted RBP17.34■□□□□ 0.37
TSNARE1-205ENST00000520166 BRD8Q9H0E9 1235 aa17.34■□□□□ 0.37
TSNARE1-205ENST00000520166 RETREG1Q9H6L5 497 aa17.34■□□□□ 0.37
TSNARE1-205ENST00000520166 KCNK12Q9HB15 430 aa17.34■□□□□ 0.37
TSNARE1-205ENST00000520166 FBRSL1Q9HCM7 1045 aaKnown RBP17.34■□□□□ 0.37
TSNARE1-205ENST00000520166 NT5MQ9NPB1 228 aa17.34■□□□□ 0.37
TSNARE1-205ENST00000520166 DNAJC17Q9NVM6 304 aaKnown RBP17.34■□□□□ 0.37
TSNARE1-205ENST00000520166 KIAA1522Q9P206 1035 aaPredicted RBP17.34■□□□□ 0.37
TSNARE1-205ENST00000520166 KLHL8Q9P2G9 620 aaPredicted RBP17.34■□□□□ 0.37
TSNARE1-205ENST00000520166 FAM153AQ9UHL3 310 aa17.34■□□□□ 0.37
TSNARE1-205ENST00000520166 GGA2Q9UJY4 613 aa17.34■□□□□ 0.37
TSNARE1-205ENST00000520166 FBXO10Q9UK96 956 aa17.34■□□□□ 0.37
TSNARE1-205ENST00000520166 TARSL2A2RTX5 802 aaKnown RBP17.33■□□□□ 0.37
TSNARE1-205ENST00000520166 HOXC11O43248 304 aaPredicted RBP17.33■□□□□ 0.37
TSNARE1-205ENST00000520166 NFATC1O95644 943 aa17.33■□□□□ 0.37
TSNARE1-205ENST00000520166 BMP1P13497 986 aa17.33■□□□□ 0.37
TSNARE1-205ENST00000520166 NFKB1P19838 968 aa17.33■□□□□ 0.37
TSNARE1-205ENST00000520166 GJA4P35212 333 aa17.33■□□□□ 0.37
TSNARE1-205ENST00000520166 PLTPP55058 493 aa17.33■□□□□ 0.37
TSNARE1-205ENST00000520166 IFI35P80217 286 aaPredicted RBP17.33■□□□□ 0.37
TSNARE1-205ENST00000520166 PDGFRLQ15198 375 aa17.33■□□□□ 0.37
TSNARE1-205ENST00000520166 IZUMO3Q5VZ72 239 aa17.33■□□□□ 0.37
TSNARE1-205ENST00000520166 CCNI2Q6ZMN8 369 aaPredicted RBP17.33■□□□□ 0.37
TSNARE1-205ENST00000520166 SYDE1Q6ZW31 735 aaPredicted RBP17.33■□□□□ 0.37
TSNARE1-205ENST00000520166 TSEN2Q8NCE0 465 aaKnown RBP17.33■□□□□ 0.37
TSNARE1-205ENST00000520166 SPATA22Q8NHS9 363 aa17.33■□□□□ 0.37
TSNARE1-205ENST00000520166 CPT1BQ92523 772 aa17.33■□□□□ 0.37
TSNARE1-205ENST00000520166 NXPE3Q969Y0 559 aa17.33■□□□□ 0.37
TSNARE1-205ENST00000520166 EXOC2Q96KP1 924 aa17.33■□□□□ 0.37
TSNARE1-205ENST00000520166 GDAP1L1Q96MZ0 367 aa17.33■□□□□ 0.37
TSNARE1-205ENST00000520166 RAB6BQ9NRW1 208 aa17.33■□□□□ 0.37
TSNARE1-205ENST00000520166 DONSONQ9NYP3 566 aa17.33■□□□□ 0.37
TSNARE1-205ENST00000520166 VCANP13611 3396 aa17.33■□□□□ 0.37
TSNARE1-205ENST00000520166 MYO10Q9HD67 2058 aa17.33■□□□□ 0.36
TSNARE1-205ENST00000520166 GOLGA8MH3BSY2 632 aa17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms