RNA–Protein interactions for RNA: ENST00000519661.5

SPIDR-212, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,035 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-212ENST00000519661 PABPC3Q9H361 631 aaKnown RBP11.78□□□□□ -0.52
SPIDR-212ENST00000519661 DHX35Q9H5Z1 703 aaKnown RBP11.78□□□□□ -0.52
SPIDR-212ENST00000519661 ZWILCHQ9H900 591 aa11.78□□□□□ -0.52
SPIDR-212ENST00000519661 PCDH18Q9HCL0 1135 aa11.78□□□□□ -0.52
SPIDR-212ENST00000519661 ATP13A1Q9HD20 1204 aa11.78□□□□□ -0.52
SPIDR-212ENST00000519661 OSGEPQ9NPF4 335 aa11.78□□□□□ -0.52
SPIDR-212ENST00000519661 LUC7LQ9NQ29 371 aaKnown RBP11.78□□□□□ -0.52
SPIDR-212ENST00000519661 REXO2Q9Y3B8 237 aaKnown RBP11.78□□□□□ -0.52
SPIDR-212ENST00000519661 MFHAS1Q9Y4C4 1052 aa11.78□□□□□ -0.52
SPIDR-212ENST00000519661 CEP250Q9BV73 2442 aa11.77□□□□□ -0.52
SPIDR-212ENST00000519661 BCLAF3A2AJT9 711 aaKnown RBP11.77□□□□□ -0.53
SPIDR-212ENST00000519661 H3BRJ5 948 aa11.77□□□□□ -0.53
SPIDR-212ENST00000519661 EEF2KO00418 725 aaKnown RBP11.77□□□□□ -0.53
SPIDR-212ENST00000519661 ADH1BP00325 375 aa11.77□□□□□ -0.53
SPIDR-212ENST00000519661 GOT1P17174 413 aa11.77□□□□□ -0.53
SPIDR-212ENST00000519661 ERCC2P18074 760 aa11.77□□□□□ -0.53
SPIDR-212ENST00000519661 C5AR1P21730 350 aa11.77□□□□□ -0.53
SPIDR-212ENST00000519661 BCKDHBP21953 392 aa11.77□□□□□ -0.53
SPIDR-212ENST00000519661 CD6P30203 668 aa11.77□□□□□ -0.53
SPIDR-212ENST00000519661 ACVRL1P37023 503 aa11.77□□□□□ -0.53
SPIDR-212ENST00000519661 GSDMDP57764 484 aa11.77□□□□□ -0.53
SPIDR-212ENST00000519661 SFSWAPQ12872 951 aaKnown RBP11.77□□□□□ -0.53
SPIDR-212ENST00000519661 POLD3Q15054 466 aaPredicted RBP11.77□□□□□ -0.53
SPIDR-212ENST00000519661 DLG2Q15700 870 aa11.77□□□□□ -0.53
SPIDR-212ENST00000519661 CST6Q15828 149 aa11.77□□□□□ -0.53
SPIDR-212ENST00000519661 HADHQ16836 314 aaKnown RBP11.77□□□□□ -0.53
SPIDR-212ENST00000519661 C11orf63Q6NUN7 778 aa11.77□□□□□ -0.53
SPIDR-212ENST00000519661 RWDD4Q6NW29 188 aaKnown RBP11.77□□□□□ -0.53
SPIDR-212ENST00000519661 C22orf39Q6P5X5 142 aa11.77□□□□□ -0.53
SPIDR-212ENST00000519661 RAD9BQ6WBX8 426 aa11.77□□□□□ -0.53
SPIDR-212ENST00000519661 DSG4Q86SJ6 1040 aa11.77□□□□□ -0.53
SPIDR-212ENST00000519661 NPWQ8N729 165 aa11.77□□□□□ -0.53
SPIDR-212ENST00000519661 BTBD6Q96KE9 485 aa11.77□□□□□ -0.53
SPIDR-212ENST00000519661 RPL10LQ96L21 214 aaKnown RBP11.77□□□□□ -0.53
SPIDR-212ENST00000519661 KDM4CQ9H3R0 1056 aa11.77□□□□□ -0.53
SPIDR-212ENST00000519661 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.77□□□□□ -0.53
SPIDR-212ENST00000519661 GPATCH2LQ9NWQ4 482 aa11.77□□□□□ -0.53
SPIDR-212ENST00000519661 PCSK1NQ9UHG2 260 aa11.77□□□□□ -0.53
SPIDR-212ENST00000519661 EVLQ9UI08 416 aaPredicted RBP11.77□□□□□ -0.53
SPIDR-212ENST00000519661 RAB23Q9ULC3 237 aa11.77□□□□□ -0.53
SPIDR-212ENST00000519661 PCDHA13Q9Y5I0 950 aa11.77□□□□□ -0.53
SPIDR-212ENST00000519661 C3orf70A6NLC5 250 aaPredicted RBP11.76□□□□□ -0.53
SPIDR-212ENST00000519661 RASA4BC9J798 803 aa11.76□□□□□ -0.53
SPIDR-212ENST00000519661 RASA4O43374 803 aa11.76□□□□□ -0.53
SPIDR-212ENST00000519661 SMAD6O43541 496 aaKnown RBP11.76□□□□□ -0.53
SPIDR-212ENST00000519661 CREB3O43889 395 aa11.76□□□□□ -0.53
SPIDR-212ENST00000519661 PRAMEF11O60813 436 aa11.76□□□□□ -0.53
SPIDR-212ENST00000519661 GSRP00390 522 aa11.76□□□□□ -0.53
SPIDR-212ENST00000519661 ZNF806P0C7X5 589 aa11.76□□□□□ -0.53
SPIDR-212ENST00000519661 GLDCP23378 1020 aa11.76□□□□□ -0.53
SPIDR-212ENST00000519661 DRD3P35462 400 aa11.76□□□□□ -0.53
SPIDR-212ENST00000519661 MAGEA1P43355 309 aa11.76□□□□□ -0.53
SPIDR-212ENST00000519661 CSNK1DP48730 415 aa11.76□□□□□ -0.53
SPIDR-212ENST00000519661 TAS2R40P59535 323 aa11.76□□□□□ -0.53
SPIDR-212ENST00000519661 DPYSL3Q14195 570 aa11.76□□□□□ -0.53
SPIDR-212ENST00000519661 RFTN1Q14699 578 aaPredicted RBP11.76□□□□□ -0.53
SPIDR-212ENST00000519661 PAFAH1B3Q15102 231 aaKnown RBP11.76□□□□□ -0.53
SPIDR-212ENST00000519661 SPA17Q15506 151 aa11.76□□□□□ -0.53
SPIDR-212ENST00000519661 CSRP2Q16527 193 aa11.76□□□□□ -0.53
SPIDR-212ENST00000519661 TTC31Q49AM3 519 aaPredicted RBP11.76□□□□□ -0.53
SPIDR-212ENST00000519661 KCNT1Q5JUK3 1230 aa11.76□□□□□ -0.53
SPIDR-212ENST00000519661 TMCO4Q5TGY1 634 aa11.76□□□□□ -0.53
SPIDR-212ENST00000519661 DAB2IPQ5VWQ8 1189 aa11.76□□□□□ -0.53
SPIDR-212ENST00000519661 LPCAT2Q7L5N7 544 aa11.76□□□□□ -0.53
SPIDR-212ENST00000519661 ZNF366Q8N895 744 aa11.76□□□□□ -0.53
SPIDR-212ENST00000519661 C1orf216Q8TAB5 229 aa11.76□□□□□ -0.53
SPIDR-212ENST00000519661 FOXJ1Q92949 421 aa11.76□□□□□ -0.53
SPIDR-212ENST00000519661 CCDC114Q96M63 670 aa11.76□□□□□ -0.53
SPIDR-212ENST00000519661 ZNF599Q96NL3 588 aa11.76□□□□□ -0.53
SPIDR-212ENST00000519661 BAG1Q99933 345 aaPredicted RBP11.76□□□□□ -0.53
SPIDR-212ENST00000519661 SGK2Q9HBY8 427 aa11.76□□□□□ -0.53
SPIDR-212ENST00000519661 BCCIPQ9P287 314 aaKnown RBP eCLIP11.76□□□□□ -0.53
SPIDR-212ENST00000519661 DNAI1Q9UI46 699 aa11.76□□□□□ -0.53
SPIDR-212ENST00000519661 TNRC6BQ9UPQ9 1833 aaKnown RBP11.75□□□□□ -0.53
SPIDR-212ENST00000519661 RCCD1A6NED2 376 aa11.75□□□□□ -0.53
SPIDR-212ENST00000519661 SOWAHDA6NJG2 315 aa11.75□□□□□ -0.53
SPIDR-212ENST00000519661 METTL12A8MUP2 240 aa11.75□□□□□ -0.53
SPIDR-212ENST00000519661 K7ERQ8 282 aa11.75□□□□□ -0.53
SPIDR-212ENST00000519661 CBX4O00257 560 aa11.75□□□□□ -0.53
SPIDR-212ENST00000519661 RNASEH1O60930 286 aaKnown RBP11.75□□□□□ -0.53
SPIDR-212ENST00000519661 PEX11BO96011 259 aa11.75□□□□□ -0.53
SPIDR-212ENST00000519661 VAV1P15498 845 aa11.75□□□□□ -0.53
SPIDR-212ENST00000519661 ARL4AP40617 200 aa11.75□□□□□ -0.53
SPIDR-212ENST00000519661 VAV2P52735 878 aa11.75□□□□□ -0.53
SPIDR-212ENST00000519661 ZNF33AQ06730 810 aa11.75□□□□□ -0.53
SPIDR-212ENST00000519661 FAM46CQ5VWP2 391 aa11.75□□□□□ -0.53
SPIDR-212ENST00000519661 ZNF662Q6ZS27 426 aa11.75□□□□□ -0.53
SPIDR-212ENST00000519661 Q6ZVU0 165 aa11.75□□□□□ -0.53
SPIDR-212ENST00000519661 CEP68Q76N32 757 aa11.75□□□□□ -0.53
SPIDR-212ENST00000519661 RABEPKQ7Z6M1 372 aa11.75□□□□□ -0.53
SPIDR-212ENST00000519661 MAP7D3Q8IWC1 876 aa11.75□□□□□ -0.53
SPIDR-212ENST00000519661 AADATQ8N5Z0 425 aa11.75□□□□□ -0.53
SPIDR-212ENST00000519661 FRMD1Q8N878 549 aa11.75□□□□□ -0.53
SPIDR-212ENST00000519661 ATP11CQ8NB49 1132 aa11.75□□□□□ -0.53
SPIDR-212ENST00000519661 HCAR2Q8TDS4 363 aa11.75□□□□□ -0.53
SPIDR-212ENST00000519661 RLN3Q8WXF3 142 aa11.75□□□□□ -0.53
SPIDR-212ENST00000519661 OR8D1Q8WZ84 308 aa11.75□□□□□ -0.53
SPIDR-212ENST00000519661 HMCESQ96FZ2 354 aa11.75□□□□□ -0.53
SPIDR-212ENST00000519661 TOE1Q96GM8 510 aaKnown RBP11.75□□□□□ -0.53
SPIDR-212ENST00000519661 ORAI3Q9BRQ5 295 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms