RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 VPS51Q9UID3 782 aa12.75□□□□□ -0.37
CSMD1-205ENST00000519623 NOCTQ9UK39 431 aaKnown RBP12.75□□□□□ -0.37
CSMD1-205ENST00000519623 PAXBP1Q9Y5B6 917 aa12.75□□□□□ -0.37
CSMD1-205ENST00000519623 CACNA1GO43497 2377 aa12.74□□□□□ -0.37
CSMD1-205ENST00000519623 URB1O60287 2271 aaKnown RBP12.74□□□□□ -0.37
CSMD1-205ENST00000519623 COL5A1P20908 1838 aaPredicted RBP12.74□□□□□ -0.37
CSMD1-205ENST00000519623 E9PAM4 449 aa12.74□□□□□ -0.37
CSMD1-205ENST00000519623 C1QTNF3-AMACRE9PGA6 284 aa12.74□□□□□ -0.37
CSMD1-205ENST00000519623 GOLGA8SH3BPF8 625 aa12.74□□□□□ -0.37
CSMD1-205ENST00000519623 BNIP3LO60238 219 aa12.74□□□□□ -0.37
CSMD1-205ENST00000519623 ZNF821O75541 412 aaPredicted RBP12.74□□□□□ -0.37
CSMD1-205ENST00000519623 CHRNB2P17787 502 aa12.74□□□□□ -0.37
CSMD1-205ENST00000519623 GLDCP23378 1020 aa12.74□□□□□ -0.37
CSMD1-205ENST00000519623 RRM1P23921 792 aa12.74□□□□□ -0.37
CSMD1-205ENST00000519623 CHRNA3P32297 505 aa12.74□□□□□ -0.37
CSMD1-205ENST00000519623 NUDT1P36639 197 aa12.74□□□□□ -0.37
CSMD1-205ENST00000519623 BNIP3Q12983 259 aa12.74□□□□□ -0.37
CSMD1-205ENST00000519623 CAMK2BQ13554 666 aa12.74□□□□□ -0.37
CSMD1-205ENST00000519623 PIP5KL1Q5T9C9 394 aa12.74□□□□□ -0.37
CSMD1-205ENST00000519623 NAA35Q5VZE5 725 aa12.74□□□□□ -0.37
CSMD1-205ENST00000519623 LRRC31Q6UY01 552 aa12.74□□□□□ -0.37
CSMD1-205ENST00000519623 LINGO4Q6UY18 593 aa12.74□□□□□ -0.37
CSMD1-205ENST00000519623 KANSL1Q7Z3B3 1105 aa12.74□□□□□ -0.37
CSMD1-205ENST00000519623 TFAP2DQ7Z6R9 452 aa12.74□□□□□ -0.37
CSMD1-205ENST00000519623 IQCHQ86VS3 1027 aa12.74□□□□□ -0.37
CSMD1-205ENST00000519623 ATP11CQ8NB49 1132 aa12.74□□□□□ -0.37
CSMD1-205ENST00000519623 TMIEQ8NEW7 156 aa12.74□□□□□ -0.37
CSMD1-205ENST00000519623 SLC20A1Q8WUM9 679 aa12.74□□□□□ -0.37
CSMD1-205ENST00000519623 CFAP57Q96MR6 1250 aa12.74□□□□□ -0.37
CSMD1-205ENST00000519623 GANQ9H2C0 597 aa12.74□□□□□ -0.37
CSMD1-205ENST00000519623 CCDC86Q9H6F5 360 aaKnown RBP12.74□□□□□ -0.37
CSMD1-205ENST00000519623 TAB2Q9NYJ8 693 aa12.74□□□□□ -0.37
CSMD1-205ENST00000519623 FTSJ1Q9UET6 329 aa12.74□□□□□ -0.37
CSMD1-205ENST00000519623 DMTF1Q9Y222 760 aa12.74□□□□□ -0.37
CSMD1-205ENST00000519623 LAMA5O15230 3695 aa12.74□□□□□ -0.37
CSMD1-205ENST00000519623 ILVBLA1L0T0 632 aa12.73□□□□□ -0.37
CSMD1-205ENST00000519623 FAM149AA5PLN7 773 aa12.73□□□□□ -0.37
CSMD1-205ENST00000519623 TRABD2BA6NFA1 517 aa12.73□□□□□ -0.37
CSMD1-205ENST00000519623 CBX4O00257 560 aa12.73□□□□□ -0.37
CSMD1-205ENST00000519623 YKT6O15498 198 aa12.73□□□□□ -0.37
CSMD1-205ENST00000519623 SRGAP2O75044 1071 aa12.73□□□□□ -0.37
CSMD1-205ENST00000519623 ZMPSTE24O75844 475 aa12.73□□□□□ -0.37
CSMD1-205ENST00000519623 CYP1A1P04798 512 aaPredicted RBP12.73□□□□□ -0.37
CSMD1-205ENST00000519623 ITGAVP06756 1048 aa12.73□□□□□ -0.37
CSMD1-205ENST00000519623 EPHA8P29322 1005 aaPredicted RBP12.73□□□□□ -0.37
CSMD1-205ENST00000519623 OR1E1P30953 314 aa12.73□□□□□ -0.37
CSMD1-205ENST00000519623 KLK7P49862 253 aa12.73□□□□□ -0.37
CSMD1-205ENST00000519623 CLCN6P51797 869 aa12.73□□□□□ -0.37
CSMD1-205ENST00000519623 INAVAQ3KP66 663 aa12.73□□□□□ -0.37
CSMD1-205ENST00000519623 RAB6CQ53S08 254 aa12.73□□□□□ -0.37
CSMD1-205ENST00000519623 SLC45A4Q5BKX6 768 aa12.73□□□□□ -0.37
CSMD1-205ENST00000519623 C6orf118Q5T5N4 469 aa12.73□□□□□ -0.37
CSMD1-205ENST00000519623 CDKAL1Q5VV42 579 aa12.73□□□□□ -0.37
CSMD1-205ENST00000519623 DHRS13Q6UX07 377 aa12.73□□□□□ -0.37
CSMD1-205ENST00000519623 FAM131BQ86XD5 332 aa12.73□□□□□ -0.37
CSMD1-205ENST00000519623 ZNF677Q86XU0 584 aa12.73□□□□□ -0.37
CSMD1-205ENST00000519623 GALNT15Q8N3T1 639 aa12.73□□□□□ -0.37
CSMD1-205ENST00000519623 EID2Q8N6I1 236 aa12.73□□□□□ -0.37
CSMD1-205ENST00000519623 DCAF4L2Q8NA75 395 aa12.73□□□□□ -0.37
CSMD1-205ENST00000519623 CHST14Q8NCH0 376 aa12.73□□□□□ -0.37
CSMD1-205ENST00000519623 OR7D4Q8NG98 312 aa12.73□□□□□ -0.37
CSMD1-205ENST00000519623 MDM1Q8TC05 714 aa12.73□□□□□ -0.37
CSMD1-205ENST00000519623 ARRDC3Q96B67 414 aa12.73□□□□□ -0.37
CSMD1-205ENST00000519623 RAB6CQ9H0N0 254 aa12.73□□□□□ -0.37
CSMD1-205ENST00000519623 VPS16Q9H269 839 aa12.73□□□□□ -0.37
CSMD1-205ENST00000519623 PREBQ9HCU5 417 aa12.73□□□□□ -0.37
CSMD1-205ENST00000519623 FARP1Q9Y4F1 1045 aaPredicted RBP12.73□□□□□ -0.37
CSMD1-205ENST00000519623 ADAMTS20P59510 1910 aa12.72□□□□□ -0.37
CSMD1-205ENST00000519623 ITPR1Q14643 2758 aa12.72□□□□□ -0.37
CSMD1-205ENST00000519623 PRAMEF26H0Y7S4 382 aa12.72□□□□□ -0.37
CSMD1-205ENST00000519623 ENC1O14682 589 aa12.72□□□□□ -0.37
CSMD1-205ENST00000519623 EPHB6O15197 1021 aa12.72□□□□□ -0.37
CSMD1-205ENST00000519623 RNGTTO60942 597 aaKnown RBP12.72□□□□□ -0.37
CSMD1-205ENST00000519623 GFPT2O94808 682 aa12.72□□□□□ -0.37
CSMD1-205ENST00000519623 LDOC1O95751 146 aaPredicted RBP12.72□□□□□ -0.37
CSMD1-205ENST00000519623 MMP8P22894 467 aa12.72□□□□□ -0.37
CSMD1-205ENST00000519623 ARRB1P49407 418 aaPredicted RBP12.72□□□□□ -0.37
CSMD1-205ENST00000519623 JAM2P57087 298 aa12.72□□□□□ -0.37
CSMD1-205ENST00000519623 POLR2FP61218 127 aaKnown RBP12.72□□□□□ -0.37
CSMD1-205ENST00000519623 FMO1Q01740 532 aa12.72□□□□□ -0.37
CSMD1-205ENST00000519623 CDR2Q01850 454 aa12.72□□□□□ -0.37
CSMD1-205ENST00000519623 SLC20A2Q08357 652 aa12.72□□□□□ -0.37
CSMD1-205ENST00000519623 OVGP1Q12889 678 aa12.72□□□□□ -0.37
CSMD1-205ENST00000519623 DNAJC3Q13217 504 aa12.72□□□□□ -0.37
CSMD1-205ENST00000519623 STAT4Q14765 748 aa12.72□□□□□ -0.37
CSMD1-205ENST00000519623 KRT31Q15323 416 aa12.72□□□□□ -0.37
CSMD1-205ENST00000519623 CCDC14Q49A88 953 aa12.72□□□□□ -0.37
CSMD1-205ENST00000519623 SETMARQ53H47 684 aaPredicted RBP12.72□□□□□ -0.37
CSMD1-205ENST00000519623 CCDC157Q569K6 752 aa12.72□□□□□ -0.37
CSMD1-205ENST00000519623 ARSIQ5FYB1 569 aa12.72□□□□□ -0.37
CSMD1-205ENST00000519623 SFMBT2Q5VUG0 894 aa12.72□□□□□ -0.37
CSMD1-205ENST00000519623 NEK5Q6P3R8 708 aa12.72□□□□□ -0.37
CSMD1-205ENST00000519623 ZNF783Q6ZMS7 281 aa12.72□□□□□ -0.37
CSMD1-205ENST00000519623 EMC1Q8N766 993 aa12.72□□□□□ -0.37
CSMD1-205ENST00000519623 TMEM145Q8NBT3 493 aa12.72□□□□□ -0.37
CSMD1-205ENST00000519623 TSC1Q92574 1164 aa12.72□□□□□ -0.37
CSMD1-205ENST00000519623 CNDP2Q96KP4 475 aaKnown RBP12.72□□□□□ -0.37
CSMD1-205ENST00000519623 SPON2Q9BUD6 331 aa12.72□□□□□ -0.37
CSMD1-205ENST00000519623 MAGEB5Q9BZ81 275 aa12.72□□□□□ -0.37
CSMD1-205ENST00000519623 ZYG11BQ9C0D3 744 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms