RNA–Protein interactions for RNA: ENST00000519474.5

HDAC3-215, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-215ENST00000519474 SEPT11Q9NVA2 429 aaKnown RBP9.57□□□□□ -0.88
HDAC3-215ENST00000519474 SLC25A13Q9UJS0 675 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 FZD4Q9ULV1 537 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 ACTL7AQ9Y615 435 aa9.57□□□□□ -0.88
HDAC3-215ENST00000519474 PCDH15Q96QU1 1955 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 TBC1D3DA0A087WVF3 549 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 TBC1D3IA0A087WXS9 549 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 TBC1D3EA0A087X179 549 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 TBC1D3KA0A087X1G2 549 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 TBC1D3FA6NER0 549 aaPredicted RBP9.56□□□□□ -0.88
HDAC3-215ENST00000519474 FAM47DPA6NHR8 397 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 LRRC72A6NJI9 287 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 TMCO5BA8MYB1 307 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 TBC1D3LB9A6J9 549 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 DDX3XO00571 662 aaKnown RBP eCLIP9.56□□□□□ -0.884e-13■■■■□ 23.7
HDAC3-215ENST00000519474 WNT9AO14904 365 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 CCP110O43303 1012 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 SH3BP5O60239 455 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 LRIG2O94898 1065 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 ADH1BP00325 375 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 SERPINC1P01008 464 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 FTLP02792 175 aaPredicted RBP9.56□□□□□ -0.88
HDAC3-215ENST00000519474 WNT1P04628 370 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 CTSLP07711 333 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 TBC1D3HP0C7X1 549 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 GZMAP12544 262 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 RHOQP17081 205 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 CHRNA3P32297 505 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 ACVRL1P37023 503 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 PSMD8P48556 350 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 CCR5P51681 352 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 GNA12Q03113 381 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 GRIK2Q13002 908 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 SLC14A1Q13336 389 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 MAMLD1Q13495 774 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 KIF19Q2TAC6 998 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 HLA-BQ31612 363 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 C6orf118Q5T5N4 469 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 SFMBT2Q5VUG0 894 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 TBC1D3GQ6DHY5 549 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 TBC1D3CQ6IPX1 549 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 PLEKHA7Q6IQ23 1121 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 SCYL2Q6P3W7 929 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 ZNF783Q6ZMS7 281 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 SLFN11Q7Z7L1 901 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 TBC1D3Q8IZP1 549 aaPredicted RBP9.56□□□□□ -0.88
HDAC3-215ENST00000519474 DCAF4L2Q8NA75 395 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 CHST14Q8NCH0 376 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 TMIEQ8NEW7 156 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 OR2T34Q8NGX1 318 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 PIP4K2CQ8TBX8 421 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 OR8D1Q8WZ84 308 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 SNX19Q92543 992 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 NTAN1Q96AB6 310 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 CAMK1GQ96NX5 476 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 C2orf49Q9BVC5 232 aaPredicted RBP9.56□□□□□ -0.88
HDAC3-215ENST00000519474 GAREM1Q9H706 876 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 TMEM248Q9NWD8 314 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 ARHGAP20Q9P2F6 1191 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 FZD10Q9ULW2 581 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 WASF3Q9UPY6 502 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 ANKRD6Q9Y2G4 727 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 SNX11Q9Y5W9 270 aa9.56□□□□□ -0.88
HDAC3-215ENST00000519474 DOCK4Q8N1I0 1966 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 FRYLO94915 3013 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 DMXL1Q9Y485 3027 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 GOLGA6L3A6NEY3 463 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 TMEM191CA6NGB0 347 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 HMGB1P1B2RPK0 211 aaPredicted RBP9.55□□□□□ -0.88
HDAC3-215ENST00000519474 CBX4O00257 560 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 ALOX15BO15296 676 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 BNIP3LO60238 219 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 RTN2O75298 545 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 TOP3BO95985 862 aaKnown RBP9.55□□□□□ -0.88
HDAC3-215ENST00000519474 L1CAMP32004 1257 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 UBASH3AP57075 661 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 TAS2R38P59533 333 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 RACK1P63244 317 aaKnown RBP9.55□□□□□ -0.88
HDAC3-215ENST00000519474 ARF5P84085 180 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 SCAPQ12770 1279 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 CNTN1Q12860 1018 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 ASIC2Q16515 512 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 POM121L1PQ3SYA9 428 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 ARSIQ5FYB1 569 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 FIGNQ5HY92 759 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 FAM46CQ5VWP2 391 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 HGSNATQ68CP4 663 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 RWDD4Q6NW29 188 aaKnown RBP9.55□□□□□ -0.88
HDAC3-215ENST00000519474 DNAJC24Q6P3W2 148 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 LRSAM1Q6UWE0 723 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 DPY19L3Q6ZPD9 716 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 DRC7Q8IY82 874 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 ARHGEF2Q92974 986 aaKnown RBP9.55□□□□□ -0.88
HDAC3-215ENST00000519474 VOPP1Q96AW1 172 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 ARRDC3Q96B67 414 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 SGSM3Q96HU1 749 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 CNTNAP3BQ96NU0 1288 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 MCEEQ96PE7 176 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 CNPY3Q9BT09 278 aa9.55□□□□□ -0.88
HDAC3-215ENST00000519474 CNTNAP3Q9BZ76 1288 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms