RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 EDF1O60869 148 aaKnown RBP4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 NOS1APO75052 506 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 CDH16O75309 829 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 SPAG6O75602 509 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 DNAJB5O75953 348 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 OR7A10O76100 309 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 MOCS3O95396 460 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 H6PDO95479 791 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 GGPS1O95749 300 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 TTLL1O95922 423 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 APOC1P02654 83 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 PGK2P07205 417 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 MCF2P10911 925 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 SLC2A3P11169 496 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 GYS1P13807 737 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 BRAFP15056 766 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 PSMC3P17980 439 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 UGT1A6P19224 532 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 TAC1P20366 129 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 CYP3A5P20815 502 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 UGT1A1P22309 533 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 UGT1A4P22310 534 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 PSMA2P25787 234 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 RBL1P28749 1068 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 LTKP29376 864 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 PMLP29590 882 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 NMT1P30419 496 aaKnown RBP4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 IDUAP35475 653 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 UGT1A3P35503 534 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 UGT1A5P35504 534 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 ARL1P40616 181 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 RECQLP46063 649 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 OR3A3P47888 321 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 NEK3P51956 506 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 TMBIM6P55061 237 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 NPEPPSP55786 919 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 EVA1CP58658 441 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 RNF4P78317 190 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 CD83Q01151 205 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 KDSRQ06136 332 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 ENPEPQ07075 957 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 LGALS3BPQ08380 585 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 IFIT5Q13325 482 aaKnown RBP4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 AUHQ13825 339 aaKnown RBP4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 STAT4Q14765 748 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 POU6F1Q14863 301 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 PDK4Q16654 411 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 PTPROQ16827 1216 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 ARHGAP44Q17R89 818 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 SLC9C1Q4G0N8 1177 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 ANKRD39Q53RE8 183 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 DCAF6Q58WW2 860 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 RUNDC3AQ59EK9 446 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 NBPF12Q5TAG4 269 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 CACHD1Q5VU97 1274 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 LMBRD2Q68DH5 695 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 PLEKHA7Q6IQ23 1121 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 KRT80Q6KB66 452 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 NANOGP8Q6NSW7 305 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 WDR59Q6PJI9 974 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 SHC4Q6S5L8 630 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 ABRAXAS1Q6UWZ7 409 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 UNC5DQ6UXZ4 953 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 IKBIPQ70UQ0 350 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 ZNF767PQ75MW2 155 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 EEPD1Q7L9B9 569 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 CATSPER4Q7RTX7 472 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 GPR180Q86V85 440 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 HPS6Q86YV9 775 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 FOXP4Q8IVH2 680 aaPredicted RBP4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 NKAIN4Q8IVV8 208 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 KLHL7Q8IXQ5 586 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 TBC1D21Q8IYX1 336 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 LINC00518Q8N0U6 118 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 USHBP1Q8N6Y0 703 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 MAGEB6Q8N7X4 407 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 SNX31Q8N9S9 440 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 ARRDC4Q8NCT1 418 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 BEST2Q8NFU1 509 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 GDPD5Q8WTR4 605 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 RSAD2Q8WXG1 361 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 KLHL6Q8WZ60 621 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 GPRASP2Q96D09 838 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 C18orf8Q96DM3 657 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 DEPDC7Q96QD5 511 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 ERGIC2Q96RQ1 377 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 CDK5RAP1Q96SZ6 601 aaKnown RBP4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 SLC9A7Q96T83 725 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 MEIS3Q99687 375 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 DOK1Q99704 481 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 BCL7BQ9BQE9 202 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 ISCA1Q9BUE6 129 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 NUP85Q9BW27 656 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 MTMR12Q9C0I1 747 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 SLC6A17Q9H1V8 727 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 VPS11Q9H270 941 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 GOLPH3Q9H4A6 298 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 NCOR1P1Q9H4R4 102 aa4.9□□□□□ -1.63
HMGB1P19-201ENST00000517578 FAM96AQ9H5X1 160 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms