RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 PTCD3Q96EY7 689 aaKnown RBP11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 CDRT15Q96T59 188 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 CLPBQ9H078 707 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 ZNF395Q9H8N7 513 aaPredicted RBP11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 POPDC2Q9HBU9 364 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 CHCHD3Q9NX63 227 aaKnown RBP11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 PCDHB5Q9Y5E4 795 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 SMIM31A0A1B0GVY4 71 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 PLA2G6O60733 806 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 ERBB2P04626 1255 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 COX4I1P13073 169 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 PLOD1Q02809 727 aaPredicted RBP11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 DMC1Q14565 340 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 RALGPS1Q5JS13 557 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 RBM44Q6ZP01 1051 aaKnown RBP11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 ZNF467Q7Z7K2 595 aaPredicted RBP11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 TFAP2BQ92481 460 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 GFM2Q969S9 779 aaKnown RBP11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 EBNA1BP2Q99848 306 aaKnown RBP11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 EBF4Q9BQW3 602 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 SCUBE2Q9NQ36 999 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 MAN1C1Q9NR34 630 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 PPM1HQ9ULR3 514 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 PCDHA11Q9Y5I1 949 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 GLTPD2A6NH11 291 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 MANSC4A6NHS7 340 aaPredicted RBP11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 TNFAIP8O95379 198 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 ERVK-10P10266 1014 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 PEX2P28328 305 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 RENBPP51606 427 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 ZNF143P52747 638 aaPredicted RBP11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 PKNOX1P55347 436 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 TTLL9Q3SXZ7 439 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 ZC3H12AQ5D1E8 599 aaKnown RBP11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 PPP4R4Q6NUP7 873 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 KCNMB4Q86W47 210 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 HPS6Q86YV9 775 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 ZDHHC17Q8IUH5 632 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 CPXM1Q96SM3 734 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 PIF1Q9H611 641 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 XPNPEP1Q9NQW7 623 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 OR12D3Q9UGF7 316 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 VPS9D1Q9Y2B5 631 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 TNRC6CQ9HCJ0 1690 aaKnown RBP11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 MAST2Q6P0Q8 1798 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 C5orf58C9J3I9 102 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 DLDP09622 509 aaKnown RBP11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 B3GNT6Q6ZMB0 384 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 FAM183BPQ6ZVS7 135 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 RAB42Q8N4Z0 105 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 LPCAT1Q8NF37 534 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 CLEC4DQ8WXI8 215 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 LPPQ93052 612 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 FAM162AQ96A26 154 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 CATSPER2Q96P56 530 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 PANX3Q96QZ0 392 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 CCDC28BQ9BUN5 200 aa11.01□□□□□ -0.65
PCDHGA1-202ENST00000517417 SCN7AQ01118 1682 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 C15orf38-AP3S2A0A0A6YYH1 394 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 BUD23O43709 281 aaKnown RBP11□□□□□ -0.65
PCDHGA1-202ENST00000517417 GABRB2P47870 512 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 INHBEP58166 350 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 PPIL2Q13356 520 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 SLC5A9Q2M3M2 681 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 ARPINQ7Z6K5 226 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 ZFRQ96KR1 1074 aaKnown RBP11□□□□□ -0.65
PCDHGA1-202ENST00000517417 NTPCRQ9BSD7 190 aaKnown RBP11□□□□□ -0.65
PCDHGA1-202ENST00000517417 SPATA16Q9BXB7 569 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 ATP13A1Q9HD20 1204 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 TLR8Q9NR97 1041 aaKnown RBP11□□□□□ -0.65
PCDHGA1-202ENST00000517417 DLEC1Q9Y238 1755 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 THSD7AQ9UPZ6 1657 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 EVPLLA8MZ36 301 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 UGT1A9O60656 530 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 KPNA6O60684 536 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 VCLP18206 1134 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 IL1R2P27930 398 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 CRHR1P34998 444 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 AQP4P55087 323 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 PEX6Q13608 980 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 AGKQ53H12 422 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 PLEKHG4Q58EX7 1191 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 C10orf107Q8IVU9 208 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 NAT14Q8WUY8 206 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 THAP11Q96EK4 314 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 SNRNP25Q9BV90 132 aaKnown RBP11□□□□□ -0.65
PCDHGA1-202ENST00000517417 UGT1A7Q9HAW7 530 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 UGT1A10Q9HAW8 530 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 UGT1A8Q9HAW9 530 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 CLCA2Q9UQC9 943 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 SNX13Q9Y5W8 968 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 NRCAMQ92823 1304 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 CAPN8A6NHC0 703 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 PHGDHO43175 533 aaKnown RBP11□□□□□ -0.65
PCDHGA1-202ENST00000517417 CRTAMO95727 393 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 YWHAQP27348 245 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 RPL5P46777 297 aaKnown RBP11□□□□□ -0.65
PCDHGA1-202ENST00000517417 CD151P48509 253 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 RAP1GDS1P52306 607 aa11□□□□□ -0.65
PCDHGA1-202ENST00000517417 NT5DC4Q86YG4 428 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms