RNA–Protein interactions for RNA: ENST00000516918.1

SCARNA11.1-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 132 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.1-201ENST00000516918 FEM1AQ9BSK4 669 aa7.16□□□□□ -1.26
SCARNA11.1-201ENST00000516918 CLMPQ9H6B4 373 aa7.16□□□□□ -1.26
SCARNA11.1-201ENST00000516918 FAM204AQ9H8W3 233 aa7.16□□□□□ -1.26
SCARNA11.1-201ENST00000516918 POPDC2Q9HBU9 364 aa7.16□□□□□ -1.26
SCARNA11.1-201ENST00000516918 PREBQ9HCU5 417 aa7.16□□□□□ -1.26
SCARNA11.1-201ENST00000516918 ASCL3Q9NQ33 180 aa7.16□□□□□ -1.26
SCARNA11.1-201ENST00000516918 THSD1Q9NS62 852 aa7.16□□□□□ -1.26
SCARNA11.1-201ENST00000516918 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.16□□□□□ -1.26
SCARNA11.1-201ENST00000516918 DDIT4Q9NX09 232 aa7.16□□□□□ -1.26
SCARNA11.1-201ENST00000516918 DNAJC28Q9NX36 388 aa7.16□□□□□ -1.26
SCARNA11.1-201ENST00000516918 VPS28Q9UK41 221 aa7.16□□□□□ -1.26
SCARNA11.1-201ENST00000516918 VANGL2Q9ULK5 521 aa7.16□□□□□ -1.26
SCARNA11.1-201ENST00000516918 ZFR2Q9UPR6 939 aaKnown RBP7.16□□□□□ -1.26
SCARNA11.1-201ENST00000516918 SATB2Q9UPW6 733 aa7.16□□□□□ -1.26
SCARNA11.1-201ENST00000516918 RP1P56715 2156 aa7.16□□□□□ -1.26
SCARNA11.1-201ENST00000516918 KIF26BQ2KJY2 2108 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 NEMP2A6NFY4 417 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 E5RJQ4 531 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 SCAMP1O15126 338 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 CASC3O15234 703 aaKnown RBP7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 ARHGAP6O43182 974 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 SNAP91O60641 907 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 GRAP2O75791 330 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 CNTN5O94779 1100 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 ENDOD1O94919 500 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 IGLV3-25P01717 112 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 SRCP12931 536 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 KRT5P13647 590 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 TGM2P21980 687 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 HNRNPA2B1P22626 353 aaKnown RBP7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 RRM1P23921 792 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 CHRNA3P32297 505 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 RPL34P49207 117 aaKnown RBP7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 OXCT1P55809 520 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 ERVPABLB-1P60509 514 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 YWHAZP63104 245 aaKnown RBP7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 CDK17Q00537 523 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 ZNF177Q13360 481 aaPredicted RBP7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 MAPK8IP2Q13387 824 aaPredicted RBP7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 AUHQ13825 339 aaKnown RBP7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 DRAP1Q14919 205 aaPredicted RBP7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 ZSCAN23Q3MJ62 389 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 CCDC40Q4G0X9 1142 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 GUSBP11Q6P575 273 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 GCNT7Q6ZNI0 430 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 EFL1Q7Z2Z2 1120 aaKnown RBP7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 PRICKLE2Q7Z3G6 844 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 DEFB106AQ8N104 65 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 ATP11CQ8NB49 1132 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 LMO3Q8TAP4 145 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 GRIN3AQ8TCU5 1115 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 CCDC34Q96HJ3 373 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 BMFQ96LC9 184 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 KREMEN1Q96MU8 473 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 SLC46A1Q96NT5 459 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 PPP1R9BQ96SB3 815 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 SLC4A5Q9BY07 1137 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 DPH1Q9BZG8 443 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 TRIM4Q9C037 500 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 MUC3BQ9H195 1237 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 TNKS2Q9H2K2 1166 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 GDPD2Q9HCC8 539 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 METTL14Q9HCE5 456 aaKnown RBP7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 ACP6Q9NPH0 428 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 DYRK4Q9NR20 520 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 NLGN3Q9NZ94 848 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 FARP1Q9Y4F1 1045 aaPredicted RBP7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 OR51B4Q9Y5P0 310 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 SNX10Q9Y5X0 201 aa7.15□□□□□ -1.26
SCARNA11.1-201ENST00000516918 PTPN13Q12923 2485 aa7.15□□□□□ -1.27
SCARNA11.1-201ENST00000516918 TENM4Q6N022 2769 aa7.14□□□□□ -1.27
SCARNA11.1-201ENST00000516918 A0A1W2PQ27 194 aa7.14□□□□□ -1.27
SCARNA11.1-201ENST00000516918 A0A1W2PQ64 194 aa7.14□□□□□ -1.27
SCARNA11.1-201ENST00000516918 POM121BA6NF01 834 aa7.14□□□□□ -1.27
SCARNA11.1-201ENST00000516918 A6NNZ2 444 aa7.14□□□□□ -1.27
SCARNA11.1-201ENST00000516918 K7ENP7 123 aa7.14□□□□□ -1.27
SCARNA11.1-201ENST00000516918 ALOX15BO15296 676 aa7.14□□□□□ -1.27
SCARNA11.1-201ENST00000516918 RAD51BO15315 384 aa7.14□□□□□ -1.27
SCARNA11.1-201ENST00000516918 THAP12O43422 761 aa7.14□□□□□ -1.27
SCARNA11.1-201ENST00000516918 SMAD6O43541 496 aaKnown RBP7.14□□□□□ -1.27
SCARNA11.1-201ENST00000516918 LETM1O95202 739 aaPredicted RBP7.14□□□□□ -1.27
SCARNA11.1-201ENST00000516918 WISP1O95388 367 aa7.14□□□□□ -1.27
SCARNA11.1-201ENST00000516918 PAK4O96013 591 aaPredicted RBP7.14□□□□□ -1.27
SCARNA11.1-201ENST00000516918 GP1BAP07359 652 aa7.14□□□□□ -1.27
SCARNA11.1-201ENST00000516918 SLC2A3P11169 496 aa7.14□□□□□ -1.27
SCARNA11.1-201ENST00000516918 CCR1P32246 355 aa7.14□□□□□ -1.27
SCARNA11.1-201ENST00000516918 VASPP50552 380 aaPredicted RBP7.14□□□□□ -1.27
SCARNA11.1-201ENST00000516918 HNRNPKP61978 463 aaKnown RBP eCLIP7.14□□□□□ -1.27
SCARNA11.1-201ENST00000516918 NFATC3Q12968 1075 aa7.14□□□□□ -1.27
SCARNA11.1-201ENST00000516918 NME3Q13232 169 aa7.14□□□□□ -1.27
SCARNA11.1-201ENST00000516918 EIF4EBP2Q13542 120 aaPredicted RBP7.14□□□□□ -1.27
SCARNA11.1-201ENST00000516918 FGL2Q14314 439 aa7.14□□□□□ -1.27
SCARNA11.1-201ENST00000516918 FZD2Q14332 565 aa7.14□□□□□ -1.27
SCARNA11.1-201ENST00000516918 DEFB133Q30KQ1 61 aa7.14□□□□□ -1.27
SCARNA11.1-201ENST00000516918 ARSIQ5FYB1 569 aa7.14□□□□□ -1.27
SCARNA11.1-201ENST00000516918 TPRG1LQ5T0D9 272 aa7.14□□□□□ -1.27
SCARNA11.1-201ENST00000516918 ZNF658Q5TYW1 1059 aaPredicted RBP7.14□□□□□ -1.27
SCARNA11.1-201ENST00000516918 TTC39BQ5VTQ0 682 aaPredicted RBP7.14□□□□□ -1.27
SCARNA11.1-201ENST00000516918 ISM2Q6H9L7 571 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms