RNA–Protein interactions for RNA: ENST00000516405.1

RNU6-542P-201, Transcript of RNA, U6 small nuclear 542, pseudogene, humanhuman

BASIC

Gene RNU6-542P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-542P-201ENST00000516405 ENO1P06733 434 aaKnown RBP-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 ACADMP11310 421 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 SELLP14151 372 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 ADRA1DP25100 572 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 PTGDSP41222 190 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 PIK3CGP48736 1102 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 RIPK4P57078 832 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 TMPRSS3P57727 454 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 PITX1P78337 314 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 TXNL4AP83876 142 aaKnown RBP-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 PRB3Q04118 309 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 SPOCK1Q08629 439 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 PMPCAQ10713 525 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 ZNF155Q12901 538 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 CCNIQ14094 377 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 CTU2Q2VPK5 515 aaKnown RBP-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 TUBB8Q3ZCM7 444 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 ANXA2RQ3ZCQ2 193 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 HIGD2BQ4VC39 106 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 C2CD6Q53TS8 623 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 WDR38Q5JTN6 314 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 CCNYL2Q5T2Q4 361 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 KRT79Q5XKE5 535 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 CCBE1Q6UXH8 406 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 TRPT1Q86TN4 253 aaKnown RBP-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 FAM90A1Q86YD7 464 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 PLD3Q8IV08 490 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 CMIPQ8IY22 773 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 ENTHD1Q8IYW4 607 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 H1FOOQ8IZA3 346 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 SLC25A41Q8N5S1 370 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 SMC1BQ8NDV3 1235 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 SPATA22Q8NHS9 363 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 TGFBRAP1Q8WUH2 860 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 NRG4Q8WWG1 115 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 TM9SF4Q92544 642 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 PPP2R3CQ969Q6 453 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 RBMXL1Q96E39 390 aaKnown RBP-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 ZNF583Q96ND8 569 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 GPR101Q96P66 508 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 VRK1Q99986 396 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 LDHAL6BQ9BYZ2 381 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 ASB8Q9H765 288 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 SAP30LQ9HAJ7 183 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 FAM118AQ9NWS6 357 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 CALCOCO1Q9P1Z2 691 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 KCNS2Q9ULS6 477 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 FAF1Q9UNN5 650 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 USP22Q9UPT9 525 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 SHOC2Q9UQ13 582 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 EPB41L3Q9Y2J2 1087 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 MMACHCQ9Y4U1 282 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 BRWD3Q6RI45 1802 aa-0.6□□□□□ -2.51
RNU6-542P-201ENST00000516405 CDC42BPBQ9Y5S2 1711 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 IGHV3OR16-10A0A075B7F0 116 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 SAC3D1A6NKF1 404 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 A8MVJ9 347 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 AGPSO00116 658 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 RAPGEF3O95398 923 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 SGPL1O95470 568 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 TMIGD3P0DMS9 266 aaPredicted RBP-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 CDH1P12830 882 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 HLA-DOBP13765 273 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 FDPSP14324 419 aaKnown RBP-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 MALP21145 153 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 NDUFS1P28331 727 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 PRDX5P30044 214 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 HOXA13P31271 388 aaPredicted RBP-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 UQCRC1P31930 480 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 AVPR1AP37288 418 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 VIPR2P41587 438 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 DNASE1L3Q13609 305 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 C3AR1Q16581 482 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 PNLIPRP3Q17RR3 467 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 CFAP100Q494V2 611 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 TOR2AQ5JU69 321 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 CERCAMQ5T4B2 595 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 KPRPQ5T749 579 aaPredicted RBP-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 TYW3Q6IPR3 259 aaKnown RBP-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 GRHL2Q6ISB3 625 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 ZNF852Q6ZMS4 543 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 UBE2R2Q712K3 238 aaPredicted RBP-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 CYB5R4Q7L1T6 521 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 ABI3BPQ7Z7G0 1075 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 SKAP1Q86WV1 359 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 SCML4Q8N228 414 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 FAM47BQ8NA70 645 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 PHYHIPLQ96FC7 376 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 CLPTM1LQ96KA5 538 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 ZNF354BQ96LW1 612 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 C1orf147Q96MC9 270 aaPredicted RBP-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 MAP3K14Q99558 947 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 MESP1Q9BRJ9 268 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 LAT2Q9GZY6 243 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 CSTL1Q9H114 145 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 ERVK-5Q9HDB9 667 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 ABHD10Q9NUJ1 306 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 PLCXD1Q9NUJ7 323 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 ATAD3AQ9NVI7 634 aa-0.61□□□□□ -2.51
RNU6-542P-201ENST00000516405 INTS10Q9NVR2 710 aaKnown RBP-0.61□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms