RNA–Protein interactions for RNA: ENST00000515355.5

SUB1-213, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SUB1, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-213ENST00000515355 PARD6AQ9NPB6 346 aa11.78□□□□□ -0.52
SUB1-213ENST00000515355 OSGEPQ9NPF4 335 aa11.78□□□□□ -0.52
SUB1-213ENST00000515355 WSB2Q9NYS7 404 aaPredicted RBP11.78□□□□□ -0.52
SUB1-213ENST00000515355 ZNF212Q9UDV6 495 aa11.78□□□□□ -0.52
SUB1-213ENST00000515355 FCF1Q9Y324 198 aaKnown RBP11.78□□□□□ -0.52
SUB1-213ENST00000515355 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.78□□□□□ -0.52
SUB1-213ENST00000515355 RIF1Q5UIP0 2472 aaKnown RBP11.77□□□□□ -0.53
SUB1-213ENST00000515355 RASA4BC9J798 803 aa11.77□□□□□ -0.53
SUB1-213ENST00000515355 H3BRJ5 948 aa11.77□□□□□ -0.53
SUB1-213ENST00000515355 DFFAO00273 331 aa11.77□□□□□ -0.53
SUB1-213ENST00000515355 FGF10O15520 208 aaPredicted RBP11.77□□□□□ -0.53
SUB1-213ENST00000515355 RASA4O43374 803 aa11.77□□□□□ -0.53
SUB1-213ENST00000515355 ATP9BO43861 1147 aa11.77□□□□□ -0.53
SUB1-213ENST00000515355 CFIP05156 583 aa11.77□□□□□ -0.53
SUB1-213ENST00000515355 TMEM253P0C7T8 217 aa11.77□□□□□ -0.53
SUB1-213ENST00000515355 RARAP10276 462 aa11.77□□□□□ -0.53
SUB1-213ENST00000515355 ACSL1P33121 698 aa11.77□□□□□ -0.53
SUB1-213ENST00000515355 PCK1P35558 622 aa11.77□□□□□ -0.53
SUB1-213ENST00000515355 ARL4AP40617 200 aa11.77□□□□□ -0.53
SUB1-213ENST00000515355 NOP2P46087 812 aaKnown RBP11.77□□□□□ -0.53
SUB1-213ENST00000515355 ARID5BQ14865 1188 aa11.77□□□□□ -0.53
SUB1-213ENST00000515355 ACAP1Q15027 740 aa11.77□□□□□ -0.53
SUB1-213ENST00000515355 HADHQ16836 314 aaKnown RBP11.77□□□□□ -0.53
SUB1-213ENST00000515355 SYCP2LQ5T4T6 812 aa11.77□□□□□ -0.53
SUB1-213ENST00000515355 TXNRD3NBQ6F5E7 133 aa11.77□□□□□ -0.53
SUB1-213ENST00000515355 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.77□□□□□ -0.53
SUB1-213ENST00000515355 RFX8Q6ZV50 586 aa11.77□□□□□ -0.53
SUB1-213ENST00000515355 DSG4Q86SJ6 1040 aa11.77□□□□□ -0.53
SUB1-213ENST00000515355 CPNE8Q86YQ8 564 aa11.77□□□□□ -0.53
SUB1-213ENST00000515355 GRIN3AQ8TCU5 1115 aa11.77□□□□□ -0.53
SUB1-213ENST00000515355 FRS2Q8WU20 508 aa11.77□□□□□ -0.53
SUB1-213ENST00000515355 HMCESQ96FZ2 354 aa11.77□□□□□ -0.53
SUB1-213ENST00000515355 FAM129BQ96TA1 746 aa11.77□□□□□ -0.53
SUB1-213ENST00000515355 TM6SF2Q9BZW4 377 aa11.77□□□□□ -0.53
SUB1-213ENST00000515355 BTBD1Q9H0C5 482 aa11.77□□□□□ -0.53
SUB1-213ENST00000515355 MAGEH1Q9H213 219 aa11.77□□□□□ -0.53
SUB1-213ENST00000515355 PABPC3Q9H361 631 aaKnown RBP11.77□□□□□ -0.53
SUB1-213ENST00000515355 KLHL11Q9NVR0 708 aa11.77□□□□□ -0.53
SUB1-213ENST00000515355 USP36Q9P275 1121 aaKnown RBP11.77□□□□□ -0.53
SUB1-213ENST00000515355 UVRAGQ9P2Y5 699 aa11.77□□□□□ -0.53
SUB1-213ENST00000515355 NEU3Q9UQ49 428 aa11.77□□□□□ -0.53
SUB1-213ENST00000515355 EP300Q09472 2414 aaPredicted RBP11.77□□□□□ -0.53
SUB1-213ENST00000515355 PIEZO1Q92508 2521 aa11.76□□□□□ -0.53
SUB1-213ENST00000515355 BCLAF3A2AJT9 711 aaKnown RBP11.76□□□□□ -0.53
SUB1-213ENST00000515355 PATE3B3GLJ2 98 aa11.76□□□□□ -0.53
SUB1-213ENST00000515355 C1QTNF3-AMACRE9PGA6 284 aa11.76□□□□□ -0.53
SUB1-213ENST00000515355 KPNA3O00505 521 aaPredicted RBP11.76□□□□□ -0.53
SUB1-213ENST00000515355 FSBPO95073 299 aa11.76□□□□□ -0.53
SUB1-213ENST00000515355 IPO7O95373 1038 aaKnown RBP11.76□□□□□ -0.53
SUB1-213ENST00000515355 ADH1BP00325 375 aa11.76□□□□□ -0.53
SUB1-213ENST00000515355 ERCC2P18074 760 aa11.76□□□□□ -0.53
SUB1-213ENST00000515355 AMPD1P23109 780 aa11.76□□□□□ -0.53
SUB1-213ENST00000515355 CYLC1P35663 651 aaPredicted RBP11.76□□□□□ -0.53
SUB1-213ENST00000515355 VASPP50552 380 aaPredicted RBP11.76□□□□□ -0.53
SUB1-213ENST00000515355 METAP1P53582 386 aa11.76□□□□□ -0.53
SUB1-213ENST00000515355 NAP1L1P55209 391 aaKnown RBP11.76□□□□□ -0.53
SUB1-213ENST00000515355 CDH6P55285 790 aa11.76□□□□□ -0.53
SUB1-213ENST00000515355 ARF5P84085 180 aa11.76□□□□□ -0.53
SUB1-213ENST00000515355 ZBTB16Q05516 673 aa11.76□□□□□ -0.53
SUB1-213ENST00000515355 SLC20A2Q08357 652 aa11.76□□□□□ -0.53
SUB1-213ENST00000515355 SFSWAPQ12872 951 aaKnown RBP11.76□□□□□ -0.53
SUB1-213ENST00000515355 SEMA3BQ13214 749 aa11.76□□□□□ -0.53
SUB1-213ENST00000515355 ELAVL3Q14576 367 aaKnown RBP11.76□□□□□ -0.53
SUB1-213ENST00000515355 ATP13A4Q4VNC1 1196 aa11.76□□□□□ -0.53
SUB1-213ENST00000515355 DCAF12L1Q5VU92 463 aa11.76□□□□□ -0.53
SUB1-213ENST00000515355 FAM46CQ5VWP2 391 aa11.76□□□□□ -0.53
SUB1-213ENST00000515355 C22orf39Q6P5X5 142 aa11.76□□□□□ -0.53
SUB1-213ENST00000515355 PRR23CQ6ZRP0 262 aa11.76□□□□□ -0.53
SUB1-213ENST00000515355 METTL3Q86U44 580 aaKnown RBP11.76□□□□□ -0.53
SUB1-213ENST00000515355 SLC41A1Q8IVJ1 513 aa11.76□□□□□ -0.53
SUB1-213ENST00000515355 ABCA7Q8IZY2 2146 aa11.76□□□□□ -0.53
SUB1-213ENST00000515355 GPR161Q8N6U8 529 aaKnown RBP11.76□□□□□ -0.53
SUB1-213ENST00000515355 KCTD6Q8NC69 237 aa11.76□□□□□ -0.53
SUB1-213ENST00000515355 CHST14Q8NCH0 376 aa11.76□□□□□ -0.53
SUB1-213ENST00000515355 OR6K2Q8NGY2 324 aa11.76□□□□□ -0.53
SUB1-213ENST00000515355 OR14C36Q8NHC7 312 aa11.76□□□□□ -0.53
SUB1-213ENST00000515355 FOXJ1Q92949 421 aa11.76□□□□□ -0.53
SUB1-213ENST00000515355 ACE2Q9BYF1 805 aaPredicted RBP11.76□□□□□ -0.53
SUB1-213ENST00000515355 NEUROG2Q9H2A3 272 aa11.76□□□□□ -0.53
SUB1-213ENST00000515355 C6orf106Q9H6K1 298 aaPredicted RBP11.76□□□□□ -0.53
SUB1-213ENST00000515355 VPS45Q9NRW7 570 aa11.76□□□□□ -0.53
SUB1-213ENST00000515355 TMEM74BQ9NUR3 256 aa11.76□□□□□ -0.53
SUB1-213ENST00000515355 DONSONQ9NYP3 566 aa11.76□□□□□ -0.53
SUB1-213ENST00000515355 CWC15Q9P013 229 aaKnown RBP11.76□□□□□ -0.53
SUB1-213ENST00000515355 SERGEFQ9UGK8 458 aa11.76□□□□□ -0.53
SUB1-213ENST00000515355 NENFQ9UMX5 172 aa11.76□□□□□ -0.53
SUB1-213ENST00000515355 TFR2Q9UP52 801 aa11.76□□□□□ -0.53
SUB1-213ENST00000515355 HS3ST2Q9Y278 367 aa11.76□□□□□ -0.53
SUB1-213ENST00000515355 PCDHGA5Q9Y5G8 931 aa11.76□□□□□ -0.53
SUB1-213ENST00000515355 TBC1D3DA0A087WVF3 549 aa11.75□□□□□ -0.53
SUB1-213ENST00000515355 TBC1D3IA0A087WXS9 549 aa11.75□□□□□ -0.53
SUB1-213ENST00000515355 TBC1D3EA0A087X179 549 aa11.75□□□□□ -0.53
SUB1-213ENST00000515355 TBC1D3KA0A087X1G2 549 aa11.75□□□□□ -0.53
SUB1-213ENST00000515355 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.75□□□□□ -0.53
SUB1-213ENST00000515355 TBC1D3FA6NER0 549 aaPredicted RBP11.75□□□□□ -0.53
SUB1-213ENST00000515355 ARHGAP42A6NI28 874 aa11.75□□□□□ -0.53
SUB1-213ENST00000515355 SOWAHDA6NJG2 315 aa11.75□□□□□ -0.53
SUB1-213ENST00000515355 GOLGA6L6A8MZA4 724 aa11.75□□□□□ -0.53
SUB1-213ENST00000515355 TBC1D3LB9A6J9 549 aa11.75□□□□□ -0.53
SUB1-213ENST00000515355 KHNYNO15037 678 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms