RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 DMC1Q14565 340 aa11.56□□□□□ -0.56
HTT-213ENST00000513806 CYTH1Q15438 398 aa11.56□□□□□ -0.56
HTT-213ENST00000513806 PARP15Q460N3 678 aa11.56□□□□□ -0.56
HTT-213ENST00000513806 PREPLQ4J6C6 727 aaPredicted RBP11.56□□□□□ -0.56
HTT-213ENST00000513806 ATXN7L2Q5T6C5 722 aaPredicted RBP11.56□□□□□ -0.56
HTT-213ENST00000513806 SEL1L2Q5TEA6 688 aa11.56□□□□□ -0.56
HTT-213ENST00000513806 TSSK4Q6SA08 328 aa11.56□□□□□ -0.56
HTT-213ENST00000513806 SERPINA13PQ6UXR4 307 aa11.56□□□□□ -0.56
HTT-213ENST00000513806 SYT10Q6XYQ8 523 aa11.56□□□□□ -0.56
HTT-213ENST00000513806 ZNF783Q6ZMS7 281 aa11.56□□□□□ -0.56
HTT-213ENST00000513806 Q6ZVU0 165 aa11.56□□□□□ -0.56
HTT-213ENST00000513806 ZC3H18Q86VM9 953 aaKnown RBP11.56□□□□□ -0.56
HTT-213ENST00000513806 FBXL6Q8N531 539 aa11.56□□□□□ -0.56
HTT-213ENST00000513806 SH2D3CQ8N5H7 860 aa11.56□□□□□ -0.56
HTT-213ENST00000513806 ATPAF2Q8N5M1 289 aa11.56□□□□□ -0.56
HTT-213ENST00000513806 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.56□□□□□ -0.56
HTT-213ENST00000513806 ZNF557Q8N988 423 aaPredicted RBP11.56□□□□□ -0.56
HTT-213ENST00000513806 ATP11CQ8NB49 1132 aa11.56□□□□□ -0.56
HTT-213ENST00000513806 OR6K2Q8NGY2 324 aa11.56□□□□□ -0.56
HTT-213ENST00000513806 UCMAQ8WVF2 138 aa11.56□□□□□ -0.56
HTT-213ENST00000513806 ATG4AQ8WYN0 398 aa11.56□□□□□ -0.56
HTT-213ENST00000513806 EXOC4Q96A65 974 aa11.56□□□□□ -0.56
HTT-213ENST00000513806 ZNF419Q96HQ0 510 aaPredicted RBP11.56□□□□□ -0.56
HTT-213ENST00000513806 NELL2Q99435 816 aa11.56□□□□□ -0.56
HTT-213ENST00000513806 C2orf49Q9BVC5 232 aaPredicted RBP11.56□□□□□ -0.56
HTT-213ENST00000513806 TM6SF2Q9BZW4 377 aa11.56□□□□□ -0.56
HTT-213ENST00000513806 CHRDQ9H2X0 955 aa11.56□□□□□ -0.56
HTT-213ENST00000513806 SP110Q9HB58 689 aa11.56□□□□□ -0.56
HTT-213ENST00000513806 PDFQ9HBH1 243 aa11.56□□□□□ -0.56
HTT-213ENST00000513806 IPO11Q9UI26 975 aaKnown RBP11.56□□□□□ -0.56
HTT-213ENST00000513806 JRKLQ9Y4A0 524 aa11.56□□□□□ -0.56
HTT-213ENST00000513806 ZNF318Q5VUA4 2279 aa11.56□□□□□ -0.56
HTT-213ENST00000513806 CEP192Q8TEP8 1941 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 ZNF487B1APH4 448 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 MUSKO15146 869 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 INSIG1O15503 277 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 MAFKO60675 156 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 PRAMEF11O60813 436 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 SIN3BO75182 1162 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 ZNF821O75541 412 aaPredicted RBP11.55□□□□□ -0.56
HTT-213ENST00000513806 TMCC1O94876 653 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 HOXB2P14652 356 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 NTSR1P30989 418 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 SERPINB6P35237 376 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 GARSP41250 739 aaKnown RBP11.55□□□□□ -0.56
HTT-213ENST00000513806 RGRP47804 291 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 SERPINH1P50454 418 aaKnown RBP11.55□□□□□ -0.56
HTT-213ENST00000513806 COPS2P61201 443 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 MRPS21P82921 87 aaKnown RBP11.55□□□□□ -0.56
HTT-213ENST00000513806 DMWDQ09019 674 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 SLC10A7Q0GE19 358 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 AP1B1Q10567 949 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 TFDP2Q14188 446 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 EIF4HQ15056 248 aaKnown RBP11.55□□□□□ -0.56
HTT-213ENST00000513806 DLG2Q15700 870 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 FBXO43Q4G163 708 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 HS1BP3Q53T59 392 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 CCDC181Q5TID7 509 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 NUDT18Q6ZVK8 323 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 BBS12Q6ZW61 710 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 SLC13A5Q86YT5 568 aaPredicted RBP11.55□□□□□ -0.56
HTT-213ENST00000513806 STK40Q8N2I9 435 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 LZTR1Q8N653 840 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 CCNYQ8ND76 341 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 ACTL9Q8TC94 416 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 FRS2Q8WU20 508 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 CAPZA3Q96KX2 299 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 OLFM3Q96PB7 478 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 OSBPL9Q96SU4 736 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 OSBPL6Q9BZF3 934 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 TMEM245Q9H330 911 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 CD93Q9NPY3 652 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 SPATA6Q9NWH7 488 aaPredicted RBP11.55□□□□□ -0.56
HTT-213ENST00000513806 SEPT10Q9P0V9 454 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 UBA2Q9UBT2 640 aaPredicted RBP11.55□□□□□ -0.56
HTT-213ENST00000513806 MMP17Q9ULZ9 603 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 HPCAL4Q9UM19 191 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 PLA2G4CQ9UP65 541 aa11.55□□□□□ -0.56
HTT-213ENST00000513806 A0A1W2PQF6 199 aa11.54□□□□□ -0.56
HTT-213ENST00000513806 F5H423 210 aaPredicted RBP11.54□□□□□ -0.56
HTT-213ENST00000513806 KCNK1O00180 336 aa11.54□□□□□ -0.56
HTT-213ENST00000513806 NCAM2O15394 837 aa11.54□□□□□ -0.56
HTT-213ENST00000513806 TIMM44O43615 452 aa11.54□□□□□ -0.56
HTT-213ENST00000513806 PEX11BO96011 259 aa11.54□□□□□ -0.56
HTT-213ENST00000513806 ASLP04424 464 aa11.54□□□□□ -0.56
HTT-213ENST00000513806 SRPRAP08240 638 aaKnown RBP11.54□□□□□ -0.56
HTT-213ENST00000513806 TGM2P21980 687 aa11.54□□□□□ -0.56
HTT-213ENST00000513806 AVPR2P30518 371 aa11.54□□□□□ -0.56
HTT-213ENST00000513806 PTPN7P35236 360 aa11.54□□□□□ -0.56
HTT-213ENST00000513806 CLCN5P51795 746 aa11.54□□□□□ -0.56
HTT-213ENST00000513806 METAP1P53582 386 aa11.54□□□□□ -0.56
HTT-213ENST00000513806 MAXP61244 160 aa11.54□□□□□ -0.56
HTT-213ENST00000513806 ST8SIA6P61647 398 aa11.54□□□□□ -0.56
HTT-213ENST00000513806 SULT2A1Q06520 285 aa11.54□□□□□ -0.56
HTT-213ENST00000513806 IL10RBQ08334 325 aa11.54□□□□□ -0.56
HTT-213ENST00000513806 KLF1Q13351 362 aaPredicted RBP11.54□□□□□ -0.56
HTT-213ENST00000513806 SNX1Q13596 522 aa11.54□□□□□ -0.56
HTT-213ENST00000513806 SIX1Q15475 284 aaPredicted RBP11.54□□□□□ -0.56
HTT-213ENST00000513806 POM121L1PQ3SYA9 428 aa11.54□□□□□ -0.56
HTT-213ENST00000513806 TMEM31Q5JXX7 168 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms