RNA–Protein interactions for RNA: ENST00000513756.5

PTPN20-229, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-229ENST00000513756 BTN2A2Q8WVV5 523 aa12.38□□□□□ -0.43
PTPN20-229ENST00000513756 SLC39A13Q96H72 371 aa12.38□□□□□ -0.43
PTPN20-229ENST00000513756 CCDC114Q96M63 670 aa12.38□□□□□ -0.43
PTPN20-229ENST00000513756 NOX5Q96PH1 765 aa12.38□□□□□ -0.43
PTPN20-229ENST00000513756 STRADBQ9C0K7 418 aa12.38□□□□□ -0.43
PTPN20-229ENST00000513756 GEMIN8Q9NWZ8 242 aaKnown RBP12.38□□□□□ -0.43
PTPN20-229ENST00000513756 FAM13BQ9NYF5 915 aa12.38□□□□□ -0.43
PTPN20-229ENST00000513756 TRAF3IP3Q9Y228 551 aa12.38□□□□□ -0.43
PTPN20-229ENST00000513756 SPTAN1Q13813 2472 aaKnown RBP12.38□□□□□ -0.43
PTPN20-229ENST00000513756 SPTY2D1-AS1A0A0U1RR47 76 aa12.37□□□□□ -0.43
PTPN20-229ENST00000513756 F5H5T6 163 aa12.37□□□□□ -0.43
PTPN20-229ENST00000513756 KLRC4O43908 158 aa12.37□□□□□ -0.43
PTPN20-229ENST00000513756 NEFLP07196 543 aa12.37□□□□□ -0.43
PTPN20-229ENST00000513756 LIPCP11150 499 aa12.37□□□□□ -0.43
PTPN20-229ENST00000513756 JUNDP17535 347 aa12.37□□□□□ -0.43
PTPN20-229ENST00000513756 NR2F2P24468 414 aa12.37□□□□□ -0.43
PTPN20-229ENST00000513756 RPL13P26373 211 aaKnown RBP12.37□□□□□ -0.43
PTPN20-229ENST00000513756 RABIFP47224 123 aa12.37□□□□□ -0.43
PTPN20-229ENST00000513756 RGS7P49802 495 aa12.37□□□□□ -0.43
PTPN20-229ENST00000513756 FZD2Q14332 565 aa12.37□□□□□ -0.43
PTPN20-229ENST00000513756 DEFB133Q30KQ1 61 aa12.37□□□□□ -0.43
PTPN20-229ENST00000513756 RABGAP1LQ5R372 815 aa12.37□□□□□ -0.43
PTPN20-229ENST00000513756 PERM1Q5SV97 790 aa12.37□□□□□ -0.43
PTPN20-229ENST00000513756 RAP1GAP2Q684P5 730 aa12.37□□□□□ -0.43
PTPN20-229ENST00000513756 OR6B2Q6IFH4 312 aa12.37□□□□□ -0.43
PTPN20-229ENST00000513756 Q6ZVU0 165 aa12.37□□□□□ -0.43
PTPN20-229ENST00000513756 RAB11FIP2Q7L804 512 aa12.37□□□□□ -0.43
PTPN20-229ENST00000513756 TMIEQ8NEW7 156 aa12.37□□□□□ -0.43
PTPN20-229ENST00000513756 LMX1AQ8TE12 382 aa12.37□□□□□ -0.43
PTPN20-229ENST00000513756 DQX1Q8TE96 717 aaKnown RBP12.37□□□□□ -0.43
PTPN20-229ENST00000513756 SEMA4DQ92854 862 aa12.37□□□□□ -0.43
PTPN20-229ENST00000513756 BTN2A3PQ96KV6 586 aa12.37□□□□□ -0.43
PTPN20-229ENST00000513756 ZNF396Q96N95 335 aaPredicted RBP12.37□□□□□ -0.43
PTPN20-229ENST00000513756 CCDC3Q9BQI4 270 aa12.37□□□□□ -0.43
PTPN20-229ENST00000513756 BOCQ9BWV1 1114 aa12.37□□□□□ -0.43
PTPN20-229ENST00000513756 ADNPQ9H2P0 1102 aa12.37□□□□□ -0.43
PTPN20-229ENST00000513756 SYNDIG1Q9H7V2 258 aa12.37□□□□□ -0.43
PTPN20-229ENST00000513756 GPR27Q9NS67 375 aa12.37□□□□□ -0.43
PTPN20-229ENST00000513756 SPASTQ9UBP0 616 aa12.37□□□□□ -0.43
PTPN20-229ENST00000513756 SLC12A6Q9UHW9 1150 aa12.37□□□□□ -0.43
PTPN20-229ENST00000513756 NOTCH2Q04721 2471 aa12.37□□□□□ -0.43
PTPN20-229ENST00000513756 USP9YO00507 2555 aaPredicted RBP12.36□□□□□ -0.43
PTPN20-229ENST00000513756 RP1P56715 2156 aa12.36□□□□□ -0.43
PTPN20-229ENST00000513756 TCAF2A6NFQ2 919 aa12.36□□□□□ -0.43
PTPN20-229ENST00000513756 O00370 1275 aa12.36□□□□□ -0.43
PTPN20-229ENST00000513756 PIK3R2O00459 728 aa12.36□□□□□ -0.43
PTPN20-229ENST00000513756 KPNA3O00505 521 aaPredicted RBP12.36□□□□□ -0.43
PTPN20-229ENST00000513756 NVLO15381 856 aaKnown RBP12.36□□□□□ -0.43
PTPN20-229ENST00000513756 BNIP3LO60238 219 aa12.36□□□□□ -0.43
PTPN20-229ENST00000513756 UGT1A5P35504 534 aa12.36□□□□□ -0.43
PTPN20-229ENST00000513756 MXI1P50539 228 aa12.36□□□□□ -0.43
PTPN20-229ENST00000513756 RPS21P63220 83 aaKnown RBP12.36□□□□□ -0.43
PTPN20-229ENST00000513756 CUL4AQ13619 759 aa12.36□□□□□ -0.43
PTPN20-229ENST00000513756 MORC3Q14149 939 aa12.36□□□□□ -0.43
PTPN20-229ENST00000513756 TGIF1Q15583 401 aa12.36□□□□□ -0.43
PTPN20-229ENST00000513756 ESRP1Q6NXG1 681 aaKnown RBP12.36□□□□□ -0.43
PTPN20-229ENST00000513756 PMF1Q6P1K2 205 aa12.36□□□□□ -0.43
PTPN20-229ENST00000513756 LCLAT1Q6UWP7 414 aa12.36□□□□□ -0.43
PTPN20-229ENST00000513756 CCAR2Q8N163 923 aaKnown RBP12.36□□□□□ -0.43
PTPN20-229ENST00000513756 ATP6V0D2Q8N8Y2 350 aa12.36□□□□□ -0.43
PTPN20-229ENST00000513756 SLC35F5Q8WV83 523 aa12.36□□□□□ -0.43
PTPN20-229ENST00000513756 FEM1CQ96JP0 617 aa12.36□□□□□ -0.43
PTPN20-229ENST00000513756 BMFQ96LC9 184 aa12.36□□□□□ -0.43
PTPN20-229ENST00000513756 HSFY1Q96LI6 401 aa12.36□□□□□ -0.43
PTPN20-229ENST00000513756 TRIM62Q9BVG3 475 aa12.36□□□□□ -0.43
PTPN20-229ENST00000513756 SLC17A9Q9BYT1 436 aa12.36□□□□□ -0.43
PTPN20-229ENST00000513756 CAAP1Q9H8G2 361 aa12.36□□□□□ -0.43
PTPN20-229ENST00000513756 EPB41L5Q9HCM4 733 aa12.36□□□□□ -0.43
PTPN20-229ENST00000513756 PPP4R2Q9NY27 417 aa12.36□□□□□ -0.43
PTPN20-229ENST00000513756 DACH1Q9UI36 760 aa12.36□□□□□ -0.43
PTPN20-229ENST00000513756 ZFR2Q9UPR6 939 aaKnown RBP12.36□□□□□ -0.43
PTPN20-229ENST00000513756 PCDHB11Q9Y5F2 797 aa12.36□□□□□ -0.43
PTPN20-229ENST00000513756 PCDHGA4Q9Y5G9 962 aa12.36□□□□□ -0.43
PTPN20-229ENST00000513756 RELNP78509 3460 aa12.36□□□□□ -0.43
PTPN20-229ENST00000513756 UTP20O75691 2785 aaKnown RBP12.35□□□□□ -0.43
PTPN20-229ENST00000513756 NTN3O00634 580 aaPredicted RBP12.35□□□□□ -0.43
PTPN20-229ENST00000513756 SART1O43290 800 aaKnown RBP12.35□□□□□ -0.43
PTPN20-229ENST00000513756 YEATS4O95619 227 aa12.35□□□□□ -0.43
PTPN20-229ENST00000513756 PRNPP04156 253 aa12.35□□□□□ -0.43
PTPN20-229ENST00000513756 JMJD7P0C870 316 aa12.35□□□□□ -0.43
PTPN20-229ENST00000513756 CHRNA3P32297 505 aa12.35□□□□□ -0.43
PTPN20-229ENST00000513756 NUMBP49757 651 aa12.35□□□□□ -0.43
PTPN20-229ENST00000513756 PDX1P52945 283 aa12.35□□□□□ -0.43
PTPN20-229ENST00000513756 MAPK8IP2Q13387 824 aaPredicted RBP12.35□□□□□ -0.43
PTPN20-229ENST00000513756 ADAM9Q13443 819 aa12.35□□□□□ -0.43
PTPN20-229ENST00000513756 CUL2Q13617 745 aa12.35□□□□□ -0.43
PTPN20-229ENST00000513756 TMEM259Q4ZIN3 620 aa12.35□□□□□ -0.43
PTPN20-229ENST00000513756 SEL1L3Q68CR1 1132 aa12.35□□□□□ -0.43
PTPN20-229ENST00000513756 KIAA1161Q6NSJ0 714 aa12.35□□□□□ -0.43
PTPN20-229ENST00000513756 ERN2Q76MJ5 926 aaKnown RBP12.35□□□□□ -0.43
PTPN20-229ENST00000513756 ZSCAN30Q86W11 494 aa12.35□□□□□ -0.43
PTPN20-229ENST00000513756 GRAMD1CQ8IYS0 662 aa12.35□□□□□ -0.43
PTPN20-229ENST00000513756 SH2D3CQ8N5H7 860 aa12.35□□□□□ -0.43
PTPN20-229ENST00000513756 ZNF564Q8TBZ8 553 aaPredicted RBP12.35□□□□□ -0.43
PTPN20-229ENST00000513756 CLEC4CQ8WTT0 213 aa12.35□□□□□ -0.43
PTPN20-229ENST00000513756 EEF2KMTQ96G04 330 aa12.35□□□□□ -0.43
PTPN20-229ENST00000513756 PPP1R16AQ96I34 528 aa12.35□□□□□ -0.43
PTPN20-229ENST00000513756 FEM1AQ9BSK4 669 aa12.35□□□□□ -0.43
PTPN20-229ENST00000513756 HDAC8Q9BY41 377 aa12.35□□□□□ -0.43
PTPN20-229ENST00000513756 XPO7Q9UIA9 1087 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms