RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	CRYGN	Q8WXF5	182 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	ADI1	Q9BV57	179 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	FBXO40	Q9UH90	709 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	CNOT6	Q9ULM6	557 aa	Known RBP	11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	TBX20	Q9UMR3	447 aa		11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	GOLGA4	Q13439	2230 aa	Known RBP	11.32	□□□□□ -0.6
PDCD6-210	ENST00000513582	CLDN25	C9JDP6	229 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	PSMD10	O75832	226 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	ALDOA	P04075	364 aa	Known RBP	11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	PTPN9	P43378	593 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	CRADD	P78560	199 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	KRT76	Q01546	638 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	MMRN1	Q13201	1228 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	ATAD3B	Q5T9A4	648 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	NAPRT	Q6XQN6	538 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	GADL1	Q6ZQY3	521 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	C15orf52	Q6ZUT6	534 aa	Known RBP	11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	HEATR4	Q86WZ0	1026 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	REM2	Q8IYK8	340 aa	Predicted RBP	11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	ABHD11	Q8NFV4	315 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	LPGAT1	Q92604	370 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	DOK1	Q99704	481 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	STRA6	Q9BX79	667 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	EPS8L2	Q9H6S3	715 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	EFCAB1	Q9HAE3	211 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	ANKMY1	Q9P2S6	941 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	COPG2	Q9UBF2	871 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	RABL2A	Q9UBK7	228 aa	Predicted RBP	11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	CDY2A	Q9Y6F7	541 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	CDY1	Q9Y6F8	540 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	TAF4	O00268	1085 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	CLOCK	O15516	846 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	KCNN4	O15554	427 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	NR3C2	P08235	984 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	NCAM1	P13591	858 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	MPST	P25325	297 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	GNL1	P36915	607 aa	Predicted RBP	11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	RAP1GAP	P47736	663 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	KCNJ11	Q14654	390 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	HACE1	Q8IYU2	909 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	SAMD3	Q8N6K7	520 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	RP9	Q8TA86	221 aa	Known RBP	11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	SLCO4A1	Q96BD0	722 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	GLT1D1	Q96MS3	346 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	IL12RB2	Q99665	862 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	BEGAIN	Q9BUH8	593 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	RAD21L1	Q9H4I0	556 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	CYP26B1	Q9NR63	512 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	WDR70	Q9NW82	654 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	B3GNT3	Q9Y2A9	372 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	CENPF	P49454	3210 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	MSI1	O43347	362 aa	Known RBP	11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	GLRA3	O75311	464 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	FARP2	O94887	1054 aa	Predicted RBP	11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	CHRNG	P07510	517 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	DPEP1	P16444	411 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	PTPN2	P17706	415 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	PRKCH	P24723	683 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	POLR2I	P36954	125 aa	Known RBP	11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	COPZ1	P61923	177 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	PRKCE	Q02156	737 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	IFRD2	Q12894	506 aa	Predicted RBP	11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	MAPRE1	Q15691	268 aa	Known RBP	11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	CCDC58	Q4VC31	144 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	PITRM1	Q5JRX3	1037 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	ZBTB41	Q5SVQ8	909 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	NBPF12	Q5TAG4	269 aa	Predicted RBP	11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	IL31	Q6EBC2	164 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	LRRC8E	Q6NSJ5	796 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	FAM117B	Q6P1L5	589 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	SNX31	Q8N9S9	440 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	SUN5	Q8TC36	379 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	SH3YL1	Q96HL8	342 aa	Predicted RBP	11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	TDRD1	Q9BXT4	1180 aa	Known RBP	11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	PCDHA10	Q9Y5I2	948 aa		11.31	□□□□□ -0.6
PDCD6-210	ENST00000513582	SLC15A5	A6NIM6	579 aa		11.3	□□□□□ -0.6
PDCD6-210	ENST00000513582	YDJC	A8MPS7	323 aa		11.3	□□□□□ -0.6
PDCD6-210	ENST00000513582	TRIM38	O00635	465 aa		11.3	□□□□□ -0.6
PDCD6-210	ENST00000513582	CAPNS1	P04632	268 aa		11.3	□□□□□ -0.6
PDCD6-210	ENST00000513582	GJB1	P08034	283 aa		11.3	□□□□□ -0.6
PDCD6-210	ENST00000513582	HNRNPF	P52597	415 aa	Known RBP	11.3	□□□□□ -0.6
PDCD6-210	ENST00000513582	PRKAA2	P54646	552 aa		11.3	□□□□□ -0.6
PDCD6-210	ENST00000513582	CDH8	P55286	799 aa		11.3	□□□□□ -0.6
PDCD6-210	ENST00000513582	NLRP11	P59045	1033 aa	Known RBP	11.3	□□□□□ -0.6
PDCD6-210	ENST00000513582	GCNT1	Q02742	428 aa		11.3	□□□□□ -0.6
PDCD6-210	ENST00000513582	TNK2	Q07912	1038 aa		11.3	□□□□□ -0.6
PDCD6-210	ENST00000513582	FSTL1	Q12841	308 aa		11.3	□□□□□ -0.6
PDCD6-210	ENST00000513582	AGAP7P	Q5VUJ5	663 aa		11.3	□□□□□ -0.6
PDCD6-210	ENST00000513582	OR6B2	Q6IFH4	312 aa		11.3	□□□□□ -0.6
PDCD6-210	ENST00000513582	CMC1	Q7Z7K0	106 aa		11.3	□□□□□ -0.6
PDCD6-210	ENST00000513582	CAND1	Q86VP6	1230 aa	Known RBP	11.3	□□□□□ -0.6
PDCD6-210	ENST00000513582	SLC22A16	Q86VW1	577 aa		11.3	□□□□□ -0.6
PDCD6-210	ENST00000513582	ELMOD1	Q8N336	334 aa		11.3	□□□□□ -0.6
PDCD6-210	ENST00000513582	SLC4A11	Q8NBS3	891 aa		11.3	□□□□□ -0.6
PDCD6-210	ENST00000513582	MRPL46	Q9H2W6	279 aa	Known RBP	11.3	□□□□□ -0.6
PDCD6-210	ENST00000513582	GDAP2	Q9NXN4	497 aa		11.3	□□□□□ -0.6
PDCD6-210	ENST00000513582	GMPR2	Q9P2T1	348 aa	Known RBP	11.3	□□□□□ -0.6
PDCD6-210	ENST00000513582	C3orf70	A6NLC5	250 aa	Predicted RBP	11.3	□□□□□ -0.6
PDCD6-210	ENST00000513582		C9IYK1	514 aa		11.3	□□□□□ -0.6
PDCD6-210	ENST00000513582		E7ENX8	843 aa		11.3	□□□□□ -0.6

Retrieved 100 of 20,778 RNA–protein pairs in 17 ms