RNA–Protein interactions for RNA: ENST00000513578.5

RNF4-220, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-220ENST00000513578 OR52K1Q8NGK4 314 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 ZNF473Q8WTR7 871 aaKnown RBP8.53□□□□□ -1.04
RNF4-220ENST00000513578 HERVK_113Q902F9 699 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 CDKL2Q92772 493 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 CHMP6Q96FZ7 201 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 MAGEB18Q96M61 343 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 RPRD1AQ96P16 312 aaPredicted RBP8.53□□□□□ -1.04
RNF4-220ENST00000513578 KIFC1Q9BW19 673 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 CEP41Q9BYV8 373 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 IL21Q9HBE4 155 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 KCNK9Q9NPC2 374 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 PPANQ9NQ55 473 aaKnown RBP8.53□□□□□ -1.04
RNF4-220ENST00000513578 SMYD2Q9NRG4 433 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 RBM22Q9NW64 420 aaKnown RBP eCLIP8.53□□□□□ -1.042e-10■■■■■ 43.9
RNF4-220ENST00000513578 SYBUQ9NX95 663 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 SOX13Q9UN79 622 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 RWDD3Q9Y3V2 267 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 MAD1L1Q9Y6D9 718 aa8.53□□□□□ -1.04
RNF4-220ENST00000513578 A0A1W2PPM1 405 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 ILVBLA1L0T0 632 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 CXorf49A8MYA2 514 aaPredicted RBP8.52□□□□□ -1.05
RNF4-220ENST00000513578 H3BNC9 293 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 GFRA2O00451 464 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 PRRG1O14668 218 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 PRAMEF11O60813 436 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 RAMP2O60895 175 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 CLDN11O75508 207 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 MT-ND3P03897 115 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 HLA-DQB2P05538 268 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 DRD4P21917 467 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 GBP2P32456 591 aaPredicted RBP8.52□□□□□ -1.05
RNF4-220ENST00000513578 KCNQ1P51787 676 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 SEC24CP53992 1094 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 WDR4P57081 412 aaKnown RBP8.52□□□□□ -1.05
RNF4-220ENST00000513578 SESN2P58004 480 aaPredicted RBP8.52□□□□□ -1.05
RNF4-220ENST00000513578 IL9RQ01113 521 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 UBE3AQ05086 875 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 MGAT5Q09328 741 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 TWF1Q12792 350 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 SPARCL1Q14515 664 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 RFTN1Q14699 578 aaPredicted RBP8.52□□□□□ -1.05
RNF4-220ENST00000513578 POLD3Q15054 466 aaPredicted RBP8.52□□□□□ -1.05
RNF4-220ENST00000513578 TAF12Q16514 161 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 PCID2Q5JVF3 399 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 TMEM240Q5SV17 173 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 STXBP5Q5T5C0 1151 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 ADGRF1Q5T601 910 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 MARC1Q5VT66 337 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 ALG1LQ6GMV1 187 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 FAM117BQ6P1L5 589 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 KDELC1Q6UW63 502 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 RANBP10Q6VN20 620 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 CCDC149Q6ZUS6 474 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 OTOP3Q7RTS5 596 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 OTOP2Q7RTS6 562 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 TMCO2Q7Z6W1 182 aaPredicted RBP8.52□□□□□ -1.05
RNF4-220ENST00000513578 PIGWQ7Z7B1 504 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 SETD3Q86TU7 594 aaPredicted RBP8.52□□□□□ -1.05
RNF4-220ENST00000513578 HERC6Q8IVU3 1022 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 FAM217AQ8IXS0 508 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 PPM1NQ8N819 430 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 ACMSDQ8TDX5 336 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 NSMCE1Q8WV22 266 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 HMCESQ96FZ2 354 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 IMP4Q96G21 291 aaKnown RBP8.52□□□□□ -1.05
RNF4-220ENST00000513578 CERS2Q96G23 380 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 KLHL5Q96PQ7 755 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 RANBP9Q96S59 729 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 RAD9AQ99638 391 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 TBL1YQ9BQ87 522 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 LRRC3Q9BY71 257 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 SP110Q9HB58 689 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 PDFQ9HBH1 243 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 ATP13A1Q9HD20 1204 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 HAUS2Q9NVX0 235 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 SAMD15Q9P1V8 674 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 PRKAG3Q9UGI9 489 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 PRKAG2Q9UGJ0 569 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 TBC1D30Q9Y2I9 924 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 ANKRD36A6QL64 1941 aa8.52□□□□□ -1.05
RNF4-220ENST00000513578 ATXN2Q99700 1313 aaKnown RBP8.52□□□□□ -1.05
RNF4-220ENST00000513578 CXorf51AA0A1B0GTR3 108 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 ZCWPW2A0A1B0GU75 182 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 GOLGA6L7A0A1B0GV03 622 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 A0A1B0GVM2 712 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 TCAF2A6NFQ2 919 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 EBAG9O00559 213 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 TGM5O43548 720 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 KDELR3O43731 214 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 EPOP01588 193 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 KLKB1P03952 638 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 ADH1AP07327 375 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 HMBSP08397 361 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 CNPP09543 421 aaKnown RBP8.51□□□□□ -1.05
RNF4-220ENST00000513578 DHRS4L1P0CG22 281 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 ALADP13716 330 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 KRT4P19013 534 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 CES1P23141 567 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 OR1E1P30953 314 aa8.51□□□□□ -1.05
RNF4-220ENST00000513578 SLC6A4P31645 630 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms