RNA–Protein interactions for RNA: ENST00000513143.5

PDPN-210, Transcript of podoplanin, humanhuman

TSL 1 (best) BASIC

Gene PDPN, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-210ENST00000513143 SUGP1Q8IWZ8 645 aaKnown RBP12.79□□□□□ -0.36
PDPN-210ENST00000513143 KLHL7Q8IXQ5 586 aa12.79□□□□□ -0.36
PDPN-210ENST00000513143 CCDC105Q8IYK2 499 aa12.79□□□□□ -0.36
PDPN-210ENST00000513143 TERB1Q8NA31 727 aa12.79□□□□□ -0.36
PDPN-210ENST00000513143 HTR3CQ8WXA8 447 aa12.79□□□□□ -0.36
PDPN-210ENST00000513143 SLCO2A1Q92959 643 aa12.79□□□□□ -0.36
PDPN-210ENST00000513143 MSANTD3Q96H12 275 aa12.79□□□□□ -0.36
PDPN-210ENST00000513143 ZNF599Q96NL3 588 aa12.79□□□□□ -0.36
PDPN-210ENST00000513143 KRT12Q99456 494 aa12.79□□□□□ -0.36
PDPN-210ENST00000513143 SP110Q9HB58 689 aa12.79□□□□□ -0.36
PDPN-210ENST00000513143 HEBP1Q9NRV9 189 aa12.79□□□□□ -0.36
PDPN-210ENST00000513143 FEZ2Q9UHY8 353 aaPredicted RBP12.79□□□□□ -0.36
PDPN-210ENST00000513143 SORCS3Q9UPU3 1222 aa12.79□□□□□ -0.36
PDPN-210ENST00000513143 PIAS3Q9Y6X2 628 aa12.79□□□□□ -0.36
PDPN-210ENST00000513143 PRRT4C9JH25 899 aa12.78□□□□□ -0.36
PDPN-210ENST00000513143 KCNK1O00180 336 aa12.78□□□□□ -0.36
PDPN-210ENST00000513143 KCNN4O15554 427 aa12.78□□□□□ -0.36
PDPN-210ENST00000513143 TIMM44O43615 452 aa12.78□□□□□ -0.36
PDPN-210ENST00000513143 KAT7O95251 611 aa12.78□□□□□ -0.36
PDPN-210ENST00000513143 CD160O95971 181 aa12.78□□□□□ -0.36
PDPN-210ENST00000513143 CCNB1P14635 433 aa12.78□□□□□ -0.36
PDPN-210ENST00000513143 POLR2EP19388 210 aaKnown RBP12.78□□□□□ -0.36
PDPN-210ENST00000513143 GRIA2P42262 883 aa12.78□□□□□ -0.36
PDPN-210ENST00000513143 GALK1P51570 392 aa12.78□□□□□ -0.36
PDPN-210ENST00000513143 IFI35P80217 286 aaPredicted RBP12.78□□□□□ -0.36
PDPN-210ENST00000513143 KDSRQ06136 332 aa12.78□□□□□ -0.36
PDPN-210ENST00000513143 SLC20A2Q08357 652 aa12.78□□□□□ -0.36
PDPN-210ENST00000513143 WASHC5Q12768 1159 aa12.78□□□□□ -0.36
PDPN-210ENST00000513143 HNRNPDQ14103 355 aaKnown RBP12.78□□□□□ -0.36
PDPN-210ENST00000513143 RFTN1Q14699 578 aaPredicted RBP12.78□□□□□ -0.36
PDPN-210ENST00000513143 EIF4HQ15056 248 aaKnown RBP12.78□□□□□ -0.36
PDPN-210ENST00000513143 SLC44A4Q53GD3 710 aa12.78□□□□□ -0.36
PDPN-210ENST00000513143 IER5LQ5T953 404 aa12.78□□□□□ -0.36
PDPN-210ENST00000513143 RETSATQ6NUM9 610 aa12.78□□□□□ -0.36
PDPN-210ENST00000513143 RNF135Q8IUD6 432 aa12.78□□□□□ -0.36
PDPN-210ENST00000513143 MMGT1Q8N4V1 131 aa12.78□□□□□ -0.36
PDPN-210ENST00000513143 TEX26Q8N6G2 289 aa12.78□□□□□ -0.36
PDPN-210ENST00000513143 ALLCQ8N6M5 410 aa12.78□□□□□ -0.36
PDPN-210ENST00000513143 FAM71DQ8N9W8 422 aa12.78□□□□□ -0.36
PDPN-210ENST00000513143 GRK7Q8WTQ7 553 aa12.78□□□□□ -0.36
PDPN-210ENST00000513143 RTP4Q96DX8 246 aa12.78□□□□□ -0.36
PDPN-210ENST00000513143 CCDC114Q96M63 670 aa12.78□□□□□ -0.36
PDPN-210ENST00000513143 IL12RB2Q99665 862 aa12.78□□□□□ -0.36
PDPN-210ENST00000513143 P2RY13Q9BPV8 354 aa12.78□□□□□ -0.36
PDPN-210ENST00000513143 FERMT1Q9BQL6 677 aa12.78□□□□□ -0.36
PDPN-210ENST00000513143 FBRSL1Q9HCM7 1045 aaKnown RBP12.78□□□□□ -0.36
PDPN-210ENST00000513143 ELOVL2Q9NXB9 296 aa12.78□□□□□ -0.36
PDPN-210ENST00000513143 UBA2Q9UBT2 640 aaPredicted RBP12.78□□□□□ -0.36
PDPN-210ENST00000513143 AMACRQ9UHK6 382 aa12.78□□□□□ -0.36
PDPN-210ENST00000513143 TBC1D3BA6NDS4 549 aa12.77□□□□□ -0.37
PDPN-210ENST00000513143 C5orf60A6NFR6 353 aa12.77□□□□□ -0.37
PDPN-210ENST00000513143 SGK1O00141 431 aa12.77□□□□□ -0.37
PDPN-210ENST00000513143 ASLP04424 464 aa12.77□□□□□ -0.37
PDPN-210ENST00000513143 APODP05090 189 aa12.77□□□□□ -0.37
PDPN-210ENST00000513143 PTPN3P26045 913 aa12.77□□□□□ -0.37
PDPN-210ENST00000513143 PTGIRP43119 386 aa12.77□□□□□ -0.37
PDPN-210ENST00000513143 CTSOP43234 321 aaPredicted RBP12.77□□□□□ -0.37
PDPN-210ENST00000513143 VASPP50552 380 aaPredicted RBP12.77□□□□□ -0.37
PDPN-210ENST00000513143 RENBPP51606 427 aa12.77□□□□□ -0.37
PDPN-210ENST00000513143 GDF10P55107 478 aa12.77□□□□□ -0.37
PDPN-210ENST00000513143 GEMIN4P57678 1058 aaKnown RBP12.77□□□□□ -0.37
PDPN-210ENST00000513143 ECT2LQ008S8 904 aa12.77□□□□□ -0.37
PDPN-210ENST00000513143 SLC10A7Q0GE19 358 aa12.77□□□□□ -0.37
PDPN-210ENST00000513143 ZBTB17Q13105 803 aa12.77□□□□□ -0.37
PDPN-210ENST00000513143 DHX34Q14147 1143 aaKnown RBP12.77□□□□□ -0.37
PDPN-210ENST00000513143 TEX44Q53QW1 395 aa12.77□□□□□ -0.37
PDPN-210ENST00000513143 INO80DQ53TQ3 878 aaPredicted RBP12.77□□□□□ -0.37
PDPN-210ENST00000513143 TMCO4Q5TGY1 634 aa12.77□□□□□ -0.37
PDPN-210ENST00000513143 TXNDC11Q6PKC3 985 aa12.77□□□□□ -0.37
PDPN-210ENST00000513143 LINGO4Q6UY18 593 aa12.77□□□□□ -0.37
PDPN-210ENST00000513143 NUDT18Q6ZVK8 323 aa12.77□□□□□ -0.37
PDPN-210ENST00000513143 LRRN4CLQ8ND94 238 aa12.77□□□□□ -0.37
PDPN-210ENST00000513143 CCDC26Q8TAB7 109 aa12.77□□□□□ -0.37
PDPN-210ENST00000513143 NSMCE1Q8WV22 266 aa12.77□□□□□ -0.37
PDPN-210ENST00000513143 CASKIN2Q8WXE0 1202 aa12.77□□□□□ -0.37
PDPN-210ENST00000513143 EXOC4Q96A65 974 aa12.77□□□□□ -0.37
PDPN-210ENST00000513143 VAT1Q99536 393 aa12.77□□□□□ -0.37
PDPN-210ENST00000513143 HS3ST2Q9Y278 367 aa12.77□□□□□ -0.37
PDPN-210ENST00000513143 NEU2Q9Y3R4 380 aa12.77□□□□□ -0.37
PDPN-210ENST00000513143 ACTL7AQ9Y615 435 aa12.77□□□□□ -0.37
PDPN-210ENST00000513143 SHISA7A6NL88 538 aa12.76□□□□□ -0.37
PDPN-210ENST00000513143 MUC22E2RYF6 1773 aaPredicted RBP12.76□□□□□ -0.37
PDPN-210ENST00000513143 RNF103O00237 685 aa12.76□□□□□ -0.37
PDPN-210ENST00000513143 RIOK3O14730 519 aaKnown RBP12.76□□□□□ -0.37
PDPN-210ENST00000513143 GCATO75600 419 aa12.76□□□□□ -0.37
PDPN-210ENST00000513143 STK10O94804 968 aaKnown RBP12.76□□□□□ -0.37
PDPN-210ENST00000513143 SLU7O95391 586 aaKnown RBP12.76□□□□□ -0.37
PDPN-210ENST00000513143 ECEL1O95672 775 aa12.76□□□□□ -0.37
PDPN-210ENST00000513143 GAS8O95995 478 aa12.76□□□□□ -0.37
PDPN-210ENST00000513143 MT-CO1P00395 513 aa12.76□□□□□ -0.37
PDPN-210ENST00000513143 JCHAINP01591 159 aa12.76□□□□□ -0.37
PDPN-210ENST00000513143 ATP5BP06576 529 aaKnown RBP12.76□□□□□ -0.37
PDPN-210ENST00000513143 SRPRAP08240 638 aaKnown RBP12.76□□□□□ -0.37
PDPN-210ENST00000513143 DLDP09622 509 aaKnown RBP12.76□□□□□ -0.37
PDPN-210ENST00000513143 TNFRSF4P43489 277 aa12.76□□□□□ -0.37
PDPN-210ENST00000513143 SERPINH1P50454 418 aaKnown RBP12.76□□□□□ -0.37
PDPN-210ENST00000513143 DR1Q01658 176 aa12.76□□□□□ -0.37
PDPN-210ENST00000513143 LBRQ14739 615 aaKnown RBP12.76□□□□□ -0.37
PDPN-210ENST00000513143 CYTH1Q15438 398 aa12.76□□□□□ -0.37
PDPN-210ENST00000513143 TMEM196Q5HYL7 178 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms