RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 CPNE1Q99829 537 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 STRADBQ9C0K7 418 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 POLR1BQ9H9Y6 1135 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 KCNMB3Q9NPA1 279 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 KLHL20Q9Y2M5 609 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 TREHO43280 583 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 LAMTOR5O43504 91 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 AKAP10O43572 662 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 BAIAP3O94812 1187 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 ARRB1P49407 418 aaPredicted RBP4.31□□□□□ -1.72
VCAN-209ENST00000513016 UBE3AQ05086 875 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 TAF10Q12962 218 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 POU6F1Q14863 301 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 ATP13A5Q4VNC0 1218 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 ALFQ53S48 1182 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 PACS1Q6VY07 963 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 ANKS1BQ7Z6G8 1248 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 RAD9AQ99638 391 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 APOL2Q9BQE5 337 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 IL22Q9GZX6 179 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 TRIM10Q9UDY6 481 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 ANAPC2Q9UJX6 822 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 GTF2A1LQ9UNN4 478 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 BCL9LQ86UU0 1499 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 NEURL4Q96JN8 1562 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 ANKRD63C9JTQ0 380 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 H3BQF6 201 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 GTPBP1O00178 669 aaKnown RBP4.31□□□□□ -1.72
VCAN-209ENST00000513016 EML1O00423 815 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 CLDN4O14493 209 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 SLC25A14O95258 325 aaPredicted RBP4.31□□□□□ -1.72
VCAN-209ENST00000513016 CTDNEP1O95476 244 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 POP4O95707 220 aaKnown RBP4.31□□□□□ -1.72
VCAN-209ENST00000513016 SYN1P17600 705 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 CMPK1P30085 196 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 IGFALSP35858 605 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 FLT3P36888 993 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 MRPS5P82675 430 aaKnown RBP4.31□□□□□ -1.72
VCAN-209ENST00000513016 RALGDSQ12967 914 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 NFYCQ13952 458 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 CCDC153Q494R4 210 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 INTS11Q5TA45 600 aaKnown RBP4.31□□□□□ -1.72
VCAN-209ENST00000513016 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.31□□□□□ -1.72
VCAN-209ENST00000513016 SLC9A9Q8IVB4 645 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 TCAIMQ8N3R3 496 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 EFCAB3Q8N7B9 438 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 NAT16Q8N8M0 369 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 OR10G6Q8NH81 332 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 FUBP3Q96I24 572 aaKnown RBP eCLIP4.31□□□□□ -1.72
VCAN-209ENST00000513016 HEPHQ9BQS7 1158 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 CYLDQ9NQC7 956 aa4.31□□□□□ -1.72
VCAN-209ENST00000513016 A0A1B0GW55 424 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 RNF103O00237 685 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 WWP2O00308 870 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 PEX12O00623 359 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 FGF1P05230 155 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 DUX4L2P0CJ85 424 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 DUX4L3P0CJ86 424 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 DUX4L4P0CJ87 422 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 DUX4L5P0CJ88 424 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 DUX4L6P0CJ89 424 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 DUX4L7P0CJ90 424 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 CPA3P15088 417 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 SMPD1P17405 629 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 CLCN5P51795 746 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 CHI3L2Q15782 390 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 PRMT9Q6P2P2 845 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 KCNMB4Q86W47 210 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 RBFAQ8N0V3 343 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 CELF5Q8N6W0 485 aaKnown RBP4.3□□□□□ -1.72
VCAN-209ENST00000513016 CYP2W1Q8TAV3 490 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 MYO19Q96H55 970 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 SLC4A9Q96Q91 983 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 HAPLN3Q96S86 360 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 TRIM51Q9BSJ1 452 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 TM6SF2Q9BZW4 377 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 ISCUQ9H1K1 167 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 EFCAB1Q9HAE3 211 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 ZC4H2Q9NQZ6 224 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 HECAQ9UBI9 543 aaPredicted RBP4.3□□□□□ -1.72
VCAN-209ENST00000513016 DUX4Q9UBX2 424 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 ZNF780BQ9Y6R6 833 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 CHURC1-FNTBB4DL54 471 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 SLC10A3P09131 477 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 GSTM1P09488 218 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 SPATA31D3P0C874 917 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 CDH3P22223 829 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 CORO1AP31146 461 aaKnown RBP4.3□□□□□ -1.72
VCAN-209ENST00000513016 GDI1P31150 447 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 DPP6P42658 865 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 SNAP47Q5SQN1 464 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 VITQ6UXI7 678 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 SPATA31D4Q6ZUB0 917 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 SLC47A2Q86VL8 602 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 IFNLR1Q8IU57 520 aaPredicted RBP4.3□□□□□ -1.72
VCAN-209ENST00000513016 FAM20CQ8IXL6 584 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 VGLL2Q8N8G2 317 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 FBXO36Q8NEA4 188 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 S100A13Q99584 98 aa4.3□□□□□ -1.72
VCAN-209ENST00000513016 TMEM245Q9H330 911 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms