RNA–Protein interactions for RNA: ENST00000512656.1

USP46-208, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 3

Gene USP46, Length 467 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-208ENST00000512656 SLC35F5Q8WV83 523 aa7.45□□□□□ -1.22
USP46-208ENST00000512656 ADAMTS14Q8WXS8 1223 aa7.45□□□□□ -1.22
USP46-208ENST00000512656 SNX19Q92543 992 aa7.45□□□□□ -1.22
USP46-208ENST00000512656 SERPINB11Q96P15 392 aa7.45□□□□□ -1.22
USP46-208ENST00000512656 BTBD1Q9H0C5 482 aa7.45□□□□□ -1.22
USP46-208ENST00000512656 TMEM245Q9H330 911 aa7.45□□□□□ -1.22
USP46-208ENST00000512656 SOX17Q9H6I2 414 aaPredicted RBP7.45□□□□□ -1.22
USP46-208ENST00000512656 GAREM1Q9H706 876 aa7.45□□□□□ -1.22
USP46-208ENST00000512656 SGK2Q9HBY8 427 aa7.45□□□□□ -1.22
USP46-208ENST00000512656 EIF2B4Q9UI10 523 aaKnown RBP7.45□□□□□ -1.22
USP46-208ENST00000512656 KLK13Q9UKR3 277 aa7.45□□□□□ -1.22
USP46-208ENST00000512656 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.45□□□□□ -1.22
USP46-208ENST00000512656 PCDHGB2Q9Y5G2 931 aa7.45□□□□□ -1.22
USP46-208ENST00000512656 CABIN1Q9Y6J0 2220 aa7.45□□□□□ -1.22
USP46-208ENST00000512656 APC2O95996 2303 aa7.45□□□□□ -1.22
USP46-208ENST00000512656 IGSF10Q6WRI0 2623 aa7.45□□□□□ -1.22
USP46-208ENST00000512656 BAHCC1Q9P281 2608 aa7.45□□□□□ -1.22
USP46-208ENST00000512656 PCDH15Q96QU1 1955 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 SRRM3A6NNA2 597 aaPredicted RBP7.44□□□□□ -1.22
USP46-208ENST00000512656 DDX3YO15523 660 aaKnown RBP7.44□□□□□ -1.22
USP46-208ENST00000512656 FLRT2O43155 660 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 MSI1O43347 362 aaKnown RBP7.44□□□□□ -1.22
USP46-208ENST00000512656 DFNA5O60443 496 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 TNFRSF21O75509 655 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 MOCS3O95396 460 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 FGFR1OPO95684 399 aaKnown RBP7.44□□□□□ -1.22
USP46-208ENST00000512656 SEMA4FO95754 770 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 GNA14O95837 355 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 IGLV3-27P01718 113 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 HLA-EP13747 358 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 ACADSBP45954 432 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 RGS7P49802 495 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 PMS1P54277 932 aaKnown RBP7.44□□□□□ -1.22
USP46-208ENST00000512656 GCNT1Q02742 428 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 C19orf57Q0VDD7 668 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 HLA-BQ31612 363 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 INAVAQ3KP66 663 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 PIK3R6Q5UE93 754 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 KLHL10Q6JEL2 608 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 RFWD3Q6PCD5 774 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 BEND5Q7L4P6 421 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 ADAT2Q7Z6V5 191 aaKnown RBP7.44□□□□□ -1.22
USP46-208ENST00000512656 ADIPOR2Q86V24 386 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 ZDHHC13Q8IUH4 622 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 FAM20CQ8IXL6 584 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 KDM1BQ8NB78 822 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 FIBINQ8TAL6 211 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 GANCQ8TET4 914 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 CYB5D2Q8WUJ1 264 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 TFAP2BQ92481 460 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 SKA1Q96BD8 255 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 CAMK1GQ96NX5 476 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 KRTAP9-2Q9BYQ4 174 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 C7orf69Q9H7B7 122 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 PRSS16Q9NQE7 514 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 TM7SF3Q9NS93 570 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 KIAA1522Q9P206 1035 aaPredicted RBP7.44□□□□□ -1.22
USP46-208ENST00000512656 PCOLCE2Q9UKZ9 415 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 TPX2Q9ULW0 747 aaKnown RBP7.44□□□□□ -1.22
USP46-208ENST00000512656 GTF3C3Q9Y5Q9 886 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 CEP192Q8TEP8 1941 aa7.44□□□□□ -1.22
USP46-208ENST00000512656 A0A1B0GVT2 93 aa7.43□□□□□ -1.22
USP46-208ENST00000512656 TARSL2A2RTX5 802 aaKnown RBP7.43□□□□□ -1.22
USP46-208ENST00000512656 TRIM49BA6NDI0 452 aa7.43□□□□□ -1.22
USP46-208ENST00000512656 LRRC72A6NJI9 287 aa7.43□□□□□ -1.22
USP46-208ENST00000512656 CAPN9O14815 690 aa7.43□□□□□ -1.22
USP46-208ENST00000512656 MED7O43513 233 aa7.43□□□□□ -1.22
USP46-208ENST00000512656 CBFA2T3O75081 653 aa7.43□□□□□ -1.22
USP46-208ENST00000512656 FSBPO95073 299 aa7.43□□□□□ -1.22
USP46-208ENST00000512656 APOEP02649 317 aa7.43□□□□□ -1.22
USP46-208ENST00000512656 SRPRAP08240 638 aaKnown RBP7.43□□□□□ -1.22
USP46-208ENST00000512656 KRT5P13647 590 aa7.43□□□□□ -1.22
USP46-208ENST00000512656 CD27P26842 260 aa7.43□□□□□ -1.22
USP46-208ENST00000512656 CD70P32970 193 aa7.43□□□□□ -1.22
USP46-208ENST00000512656 ACSL1P33121 698 aa7.43□□□□□ -1.22
USP46-208ENST00000512656 NNMTP40261 264 aa7.43□□□□□ -1.22
USP46-208ENST00000512656 GRIA4P48058 902 aa7.43□□□□□ -1.22
USP46-208ENST00000512656 CSNK1EP49674 416 aaKnown RBP7.43□□□□□ -1.22
USP46-208ENST00000512656 C21orf59P57076 290 aa7.43□□□□□ -1.22
USP46-208ENST00000512656 RPS14P62263 151 aaKnown RBP7.43□□□□□ -1.22
USP46-208ENST00000512656 CDH18Q13634 790 aa7.43□□□□□ -1.22
USP46-208ENST00000512656 MEA1Q16626 185 aa7.43□□□□□ -1.22
USP46-208ENST00000512656 HNRNPA1L2Q32P51 320 aaKnown RBP7.43□□□□□ -1.22
USP46-208ENST00000512656 FAM133BQ5BKY9 247 aaKnown RBP7.43□□□□□ -1.22
USP46-208ENST00000512656 RNF219Q5W0B1 726 aaPredicted RBP7.43□□□□□ -1.22
USP46-208ENST00000512656 LRSAM1Q6UWE0 723 aa7.43□□□□□ -1.22
USP46-208ENST00000512656 USP30Q70CQ3 517 aa7.43□□□□□ -1.22
USP46-208ENST00000512656 CARNMT1Q8N4J0 409 aa7.43□□□□□ -1.22
USP46-208ENST00000512656 ZNF366Q8N895 744 aa7.43□□□□□ -1.22
USP46-208ENST00000512656 DQX1Q8TE96 717 aaKnown RBP7.43□□□□□ -1.22
USP46-208ENST00000512656 UBASH3BQ8TF42 649 aa7.43□□□□□ -1.22
USP46-208ENST00000512656 NELFBQ8WX92 580 aa7.43□□□□□ -1.22
USP46-208ENST00000512656 IGSF8Q969P0 613 aa7.43□□□□□ -1.22
USP46-208ENST00000512656 TTC17Q96AE7 1141 aa7.43□□□□□ -1.22
USP46-208ENST00000512656 FAM149B1Q96BN6 582 aa7.43□□□□□ -1.22
USP46-208ENST00000512656 FAM81BQ96LP2 452 aa7.43□□□□□ -1.22
USP46-208ENST00000512656 MED15Q96RN5 788 aa7.43□□□□□ -1.22
USP46-208ENST00000512656 BHLHE41Q9C0J9 482 aaPredicted RBP7.43□□□□□ -1.22
USP46-208ENST00000512656 MIS12Q9H081 205 aa7.43□□□□□ -1.22
USP46-208ENST00000512656 RSPH9Q9H1X1 276 aaPredicted RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms