RNA–Protein interactions for RNA: ENST00000512243.5

SNF8-211, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 863 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-211ENST00000512243 HTR3DQ70Z44 454 aa9.74□□□□□ -0.85
SNF8-211ENST00000512243 CHSY1Q86X52 802 aa9.74□□□□□ -0.85
SNF8-211ENST00000512243 DENND1CQ8IV53 801 aa9.74□□□□□ -0.85
SNF8-211ENST00000512243 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.74□□□□□ -0.85
SNF8-211ENST00000512243 GPBAR1Q8TDU6 330 aa9.74□□□□□ -0.85
SNF8-211ENST00000512243 OSCP1Q8WVF1 389 aa9.74□□□□□ -0.85
SNF8-211ENST00000512243 WBP2Q969T9 261 aa9.74□□□□□ -0.85
SNF8-211ENST00000512243 OTUB2Q96DC9 234 aa9.74□□□□□ -0.85
SNF8-211ENST00000512243 BTN2A3PQ96KV6 586 aa9.74□□□□□ -0.85
SNF8-211ENST00000512243 DDX50Q9BQ39 737 aaKnown RBP9.74□□□□□ -0.85
SNF8-211ENST00000512243 PLA2G2FQ9BZM2 168 aa9.74□□□□□ -0.85
SNF8-211ENST00000512243 WDCPQ9H6R7 721 aa9.74□□□□□ -0.85
SNF8-211ENST00000512243 KCNK12Q9HB15 430 aa9.74□□□□□ -0.85
SNF8-211ENST00000512243 DUS2Q9NX74 493 aaKnown RBP9.74□□□□□ -0.85
SNF8-211ENST00000512243 ARHGEF38Q9NXL2 777 aa9.74□□□□□ -0.85
SNF8-211ENST00000512243 CALCOCO1Q9P1Z2 691 aa9.74□□□□□ -0.85
SNF8-211ENST00000512243 TBC1D14Q9P2M4 693 aa9.74□□□□□ -0.85
SNF8-211ENST00000512243 TRIM10Q9UDY6 481 aa9.74□□□□□ -0.85
SNF8-211ENST00000512243 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.74□□□□□ -0.85
SNF8-211ENST00000512243 F5P12259 2224 aa9.74□□□□□ -0.85
SNF8-211ENST00000512243 A0A0U1RQJ8 604 aa9.73□□□□□ -0.85
SNF8-211ENST00000512243 ENC1O14682 589 aa9.73□□□□□ -0.85
SNF8-211ENST00000512243 CHADO15335 359 aa9.73□□□□□ -0.85
SNF8-211ENST00000512243 SPOPO43791 374 aa9.73□□□□□ -0.85
SNF8-211ENST00000512243 ACSL4O60488 711 aa9.73□□□□□ -0.85
SNF8-211ENST00000512243 LRCH4O75427 683 aa9.73□□□□□ -0.85
SNF8-211ENST00000512243 PAGE1O75459 146 aa9.73□□□□□ -0.85
SNF8-211ENST00000512243 NFATC1O95644 943 aa9.73□□□□□ -0.85
SNF8-211ENST00000512243 ASGR2P07307 311 aa9.73□□□□□ -0.85
SNF8-211ENST00000512243 MIPP30301 263 aa9.73□□□□□ -0.85
SNF8-211ENST00000512243 GDI1P31150 447 aa9.73□□□□□ -0.85
SNF8-211ENST00000512243 PCK1P35558 622 aa9.73□□□□□ -0.85
SNF8-211ENST00000512243 AIF1P55008 147 aa9.73□□□□□ -0.85
SNF8-211ENST00000512243 FCHO2Q0JRZ9 810 aa9.73□□□□□ -0.85
SNF8-211ENST00000512243 PDGFRLQ15198 375 aa9.73□□□□□ -0.85
SNF8-211ENST00000512243 HADHQ16836 314 aaKnown RBP9.73□□□□□ -0.85
SNF8-211ENST00000512243 ALG1LQ6GMV1 187 aa9.73□□□□□ -0.85
SNF8-211ENST00000512243 C11orf63Q6NUN7 778 aa9.73□□□□□ -0.85
SNF8-211ENST00000512243 ZNF662Q6ZS27 426 aa9.73□□□□□ -0.85
SNF8-211ENST00000512243 BBS7Q8IWZ6 715 aa9.73□□□□□ -0.85
SNF8-211ENST00000512243 GRIN3AQ8TCU5 1115 aa9.73□□□□□ -0.85
SNF8-211ENST00000512243 ATRIPQ8WXE1 791 aa9.73□□□□□ -0.85
SNF8-211ENST00000512243 RSAD2Q8WXG1 361 aa9.73□□□□□ -0.85
SNF8-211ENST00000512243 ATP2A3Q93084 1043 aa9.73□□□□□ -0.85
SNF8-211ENST00000512243 AZIN2Q96A70 460 aa9.73□□□□□ -0.85
SNF8-211ENST00000512243 NTAN1Q96AB6 310 aa9.73□□□□□ -0.85
SNF8-211ENST00000512243 TRIM44Q96DX7 344 aaPredicted RBP9.73□□□□□ -0.85
SNF8-211ENST00000512243 LRRC3BQ96PB8 259 aa9.73□□□□□ -0.85
SNF8-211ENST00000512243 TRMT61BQ9BVS5 477 aaKnown RBP9.73□□□□□ -0.85
SNF8-211ENST00000512243 TKTL2Q9H0I9 626 aa9.73□□□□□ -0.85
SNF8-211ENST00000512243 BRD9Q9H8M2 597 aa9.73□□□□□ -0.85
SNF8-211ENST00000512243 LZTFL1Q9NQ48 299 aa9.73□□□□□ -0.85
SNF8-211ENST00000512243 ZC3H7BQ9UGR2 993 aaKnown RBP9.73□□□□□ -0.85
SNF8-211ENST00000512243 AGO1Q9UL18 857 aaKnown RBP9.73□□□□□ -0.85
SNF8-211ENST00000512243 PYCARDQ9ULZ3 195 aa9.73□□□□□ -0.85
SNF8-211ENST00000512243 GUCA1BQ9UMX6 200 aa9.73□□□□□ -0.85
SNF8-211ENST00000512243 WNT6Q9Y6F9 365 aa9.73□□□□□ -0.85
SNF8-211ENST00000512243 DUSP10Q9Y6W6 482 aa9.73□□□□□ -0.85
SNF8-211ENST00000512243 TTC28Q96AY4 2481 aa9.72□□□□□ -0.85
SNF8-211ENST00000512243 TYW5A2RUC4 315 aaKnown RBP9.72□□□□□ -0.85
SNF8-211ENST00000512243 KCNU1A8MYU2 1149 aa9.72□□□□□ -0.85
SNF8-211ENST00000512243 F5H5T6 163 aa9.72□□□□□ -0.85
SNF8-211ENST00000512243 GREM1O60565 184 aa9.72□□□□□ -0.85
SNF8-211ENST00000512243 BUB1BO60566 1050 aaPredicted RBP9.72□□□□□ -0.85
SNF8-211ENST00000512243 MOCS3O95396 460 aa9.72□□□□□ -0.85
SNF8-211ENST00000512243 KLKB1P03952 638 aa9.72□□□□□ -0.85
SNF8-211ENST00000512243 FAM87AP0C7U9 286 aa9.72□□□□□ -0.85
SNF8-211ENST00000512243 CHKAP35790 457 aa9.72□□□□□ -0.85
SNF8-211ENST00000512243 GJC1P36383 396 aa9.72□□□□□ -0.85
SNF8-211ENST00000512243 SLC1A1P43005 524 aa9.72□□□□□ -0.85
SNF8-211ENST00000512243 RAB6CQ53S08 254 aa9.72□□□□□ -0.85
SNF8-211ENST00000512243 ACBD5Q5T8D3 534 aaPredicted RBP9.72□□□□□ -0.85
SNF8-211ENST00000512243 DAB2IPQ5VWQ8 1189 aa9.72□□□□□ -0.85
SNF8-211ENST00000512243 TRIM68Q6AZZ1 485 aa9.72□□□□□ -0.85
SNF8-211ENST00000512243 SLFN11Q7Z7L1 901 aa9.72□□□□□ -0.85
SNF8-211ENST00000512243 DAAM2Q86T65 1068 aa9.72□□□□□ -0.85
SNF8-211ENST00000512243 SYCE1Q8N0S2 351 aa9.72□□□□□ -0.85
SNF8-211ENST00000512243 CPXM2Q8N436 756 aa9.72□□□□□ -0.85
SNF8-211ENST00000512243 CPA6Q8N4T0 437 aa9.72□□□□□ -0.85
SNF8-211ENST00000512243 RNF10Q8N5U6 811 aaKnown RBP9.72□□□□□ -0.85
SNF8-211ENST00000512243 CCDC185Q8N715 623 aa9.72□□□□□ -0.85
SNF8-211ENST00000512243 CSGALNACT1Q8TDX6 532 aa9.72□□□□□ -0.85
SNF8-211ENST00000512243 ASIC4Q96FT7 647 aa9.72□□□□□ -0.85
SNF8-211ENST00000512243 ZFYVE19Q96K21 471 aa9.72□□□□□ -0.85
SNF8-211ENST00000512243 ALS2CR12Q96Q35 445 aa9.72□□□□□ -0.85
SNF8-211ENST00000512243 HAPLN3Q96S86 360 aa9.72□□□□□ -0.85
SNF8-211ENST00000512243 RPP25Q9BUL9 199 aaKnown RBP9.72□□□□□ -0.85
SNF8-211ENST00000512243 KRTAP9-2Q9BYQ4 174 aa9.72□□□□□ -0.85
SNF8-211ENST00000512243 RAB6CQ9H0N0 254 aa9.72□□□□□ -0.85
SNF8-211ENST00000512243 PCSK1NQ9UHG2 260 aa9.72□□□□□ -0.85
SNF8-211ENST00000512243 USP18Q9UMW8 372 aa9.72□□□□□ -0.85
SNF8-211ENST00000512243 GRID2IPA4D2P6 1211 aa9.71□□□□□ -0.86
SNF8-211ENST00000512243 GOLGA6L9A6NEM1 432 aa9.71□□□□□ -0.86
SNF8-211ENST00000512243 CYBBP04839 570 aa9.71□□□□□ -0.86
SNF8-211ENST00000512243 SRFP11831 508 aa9.71□□□□□ -0.86
SNF8-211ENST00000512243 ARSAP15289 507 aa9.71□□□□□ -0.86
SNF8-211ENST00000512243 TACR2P21452 398 aa9.71□□□□□ -0.86
SNF8-211ENST00000512243 COMTP21964 271 aa9.71□□□□□ -0.86
SNF8-211ENST00000512243 ADRA1BP35368 520 aa9.71□□□□□ -0.86
SNF8-211ENST00000512243 VCPP55072 806 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms