RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 SLIRPQ9GZT3 109 aaKnown RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 GLT8D2Q9H1C3 349 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 RABEP2Q9H5N1 569 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 STN1Q9H668 368 aaKnown RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZNF304Q9HCX3 659 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 USP40Q9NVE5 1235 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 TMEM260Q9NX78 707 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 NKIRAS1Q9NYS0 192 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 PKD2L2Q9NZM6 624 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 WHRNQ9P202 907 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 GHRLQ9UBU3 117 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 CYP46A1Q9Y6A2 500 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 CACNA1CQ13936 2221 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 UNC13CQ8NB66 2214 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 BCLAF3A2AJT9 711 aaKnown RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 E7EVH7 732 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 PTGES3LE9PB15 166 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 H0Y626 953 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 DSCR3O14972 297 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 DYRK3O43781 588 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 TIPRLO75663 272 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 SURF6O75683 361 aaKnown RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 CABYRO75952 493 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 EIF2S1P05198 315 aaKnown RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 DLATP10515 647 aaKnown RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 AOC1P19801 751 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 KRT9P35527 623 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 GJC1P36383 396 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 ARL3P36405 182 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 CDKN2BP42772 138 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 KPNA2P52292 529 aaKnown RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 ACTR3P61158 418 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 ADARB1P78563 741 aaKnown RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 GFPT1Q06210 699 aaPredicted RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 ABRQ12979 859 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 AP3B2Q13367 1082 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 LRP8Q14114 963 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 LARS2Q15031 903 aaKnown RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 MTFR1Q15390 333 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 HIF1AQ16665 826 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 GSG1LQ6UXU4 331 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZNF438Q7Z4V0 828 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 CHSY1Q86X52 802 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 NUDCD3Q8IVD9 361 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 MFN1Q8IWA4 741 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 ZMIZ2Q8NF64 920 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 DDI1Q8WTU0 396 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 LINC01599Q8WXQ3 324 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 EDAQ92838 391 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 HPS1Q92902 700 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 LRCH3Q96II8 777 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 CYP2S1Q96SQ9 504 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 TRIM62Q9BVG3 475 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 TMEM106CQ9BVX2 250 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 C1QTNF3Q9BXJ4 246 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 REG4Q9BYZ8 158 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 C1orf21Q9H246 121 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 RANBP17Q9H2T7 1088 aaKnown RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 CCDC177Q9NQR7 707 aaPredicted RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 MAN1C1Q9NR34 630 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 IL37Q9NZH6 218 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 FLRT1Q9NZU1 646 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 SELENONQ9NZV5 590 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 TRPC6Q9Y210 931 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 ORC6Q9Y5N6 252 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 PTCH2Q9Y6C5 1203 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 HSPG2P98160 4391 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 A0A0J9YVX5 310 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 PRR23AA6NEV1 266 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 C16orf96A6NNT2 1141 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 C9IYK1 514 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 PSMD12O00232 456 aaPredicted RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 MAFGO15525 162 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 ARHGEF9O43307 516 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 KLK8O60259 260 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 B4GALT2O60909 372 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 TNNC2P02585 160 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 P4HA1P13674 534 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 UCHL3P15374 230 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 ERCC3P19447 782 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 GARTP22102 1010 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 MAPK1P28482 360 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 ATP5DP30049 168 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 GPD2P43304 727 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 RFX2P48378 723 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 MASP1P48740 699 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 CLCN5P51795 746 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 MTTPP55157 894 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 CAV3P56539 151 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 PSME3P61289 254 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 YWHAEP62258 255 aaKnown RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 EEF1A2Q05639 463 aaKnown RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 PCDH1Q08174 1060 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 ADAM15Q13444 863 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 CAPRIN1Q14444 709 aaKnown RBP1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 TSC22D1Q15714 1073 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 PTCHD3Q3KNS1 767 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 TKFCQ3LXA3 575 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 ANKRD20A2Q5SQ80 823 aa1.69□□□□□ -2.14
TRAPPC13-211ENST00000512009 ANKRD20A1Q5TYW2 823 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms