RNA–Protein interactions for RNA: ENST00000511773.5

POLR2J3-216, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 783 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-216ENST00000511773 COX16Q9P0S2 106 aa13.57□□□□□ -0.24
POLR2J3-216ENST00000511773 ZFR2Q9UPR6 939 aaKnown RBP13.57□□□□□ -0.24
POLR2J3-216ENST00000511773 PCDHGA8Q9Y5G5 932 aa13.57□□□□□ -0.24
POLR2J3-216ENST00000511773 AHCTF1Q8WYP5 2266 aa13.57□□□□□ -0.24
POLR2J3-216ENST00000511773 TRPM6Q9BX84 2022 aa13.56□□□□□ -0.24
POLR2J3-216ENST00000511773 TCAF2A6NFQ2 919 aa13.56□□□□□ -0.24
POLR2J3-216ENST00000511773 A6NNZ2 444 aa13.56□□□□□ -0.24
POLR2J3-216ENST00000511773 H3BM21 787 aa13.56□□□□□ -0.24
POLR2J3-216ENST00000511773 RNF225M0QZC1 329 aaPredicted RBP13.56□□□□□ -0.24
POLR2J3-216ENST00000511773 TERTO14746 1132 aaKnown RBP13.56□□□□□ -0.24
POLR2J3-216ENST00000511773 PAEPP09466 180 aa13.56□□□□□ -0.24
POLR2J3-216ENST00000511773 FAM87AP0C7U9 286 aa13.56□□□□□ -0.24
POLR2J3-216ENST00000511773 TBXAS1P24557 533 aaPredicted RBP13.56□□□□□ -0.24
POLR2J3-216ENST00000511773 PLK1P53350 603 aa13.56□□□□□ -0.24
POLR2J3-216ENST00000511773 PITX1P78337 314 aaPredicted RBP13.56□□□□□ -0.24
POLR2J3-216ENST00000511773 MAPK8IP2Q13387 824 aaPredicted RBP13.56□□□□□ -0.24
POLR2J3-216ENST00000511773 FZD2Q14332 565 aa13.56□□□□□ -0.24
POLR2J3-216ENST00000511773 NR0B2Q15466 257 aa13.56□□□□□ -0.24
POLR2J3-216ENST00000511773 EDRF1Q3B7T1 1238 aa13.56□□□□□ -0.24
POLR2J3-216ENST00000511773 ARL13BQ3SXY8 428 aa13.56□□□□□ -0.24
POLR2J3-216ENST00000511773 LINC00303Q3SY05 128 aa13.56□□□□□ -0.24
POLR2J3-216ENST00000511773 PERM1Q5SV97 790 aa13.56□□□□□ -0.24
POLR2J3-216ENST00000511773 NEK5Q6P3R8 708 aa13.56□□□□□ -0.24
POLR2J3-216ENST00000511773 ATG14Q6ZNE5 492 aa13.56□□□□□ -0.24
POLR2J3-216ENST00000511773 ABI3BPQ7Z7G0 1075 aa13.56□□□□□ -0.24
POLR2J3-216ENST00000511773 OR52K2Q8NGK3 314 aa13.56□□□□□ -0.24
POLR2J3-216ENST00000511773 WDR36Q8NI36 951 aaKnown RBP13.56□□□□□ -0.24
POLR2J3-216ENST00000511773 GRIN3AQ8TCU5 1115 aa13.56□□□□□ -0.24
POLR2J3-216ENST00000511773 EXTL1Q92935 676 aa13.56□□□□□ -0.24
POLR2J3-216ENST00000511773 IFT43Q96FT9 208 aa13.56□□□□□ -0.24
POLR2J3-216ENST00000511773 HSFY1Q96LI6 401 aa13.56□□□□□ -0.24
POLR2J3-216ENST00000511773 RPRD1AQ96P16 312 aaPredicted RBP13.56□□□□□ -0.24
POLR2J3-216ENST00000511773 FEM1AQ9BSK4 669 aa13.56□□□□□ -0.24
POLR2J3-216ENST00000511773 FAM204AQ9H8W3 233 aa13.56□□□□□ -0.24
POLR2J3-216ENST00000511773 USP25Q9UHP3 1055 aa13.56□□□□□ -0.24
POLR2J3-216ENST00000511773 VPS28Q9UK41 221 aa13.56□□□□□ -0.24
POLR2J3-216ENST00000511773 POM121BA6NF01 834 aa13.55□□□□□ -0.24
POLR2J3-216ENST00000511773 KCNU1A8MYU2 1149 aa13.55□□□□□ -0.24
POLR2J3-216ENST00000511773 RNF103O00237 685 aa13.55□□□□□ -0.24
POLR2J3-216ENST00000511773 CETN3O15182 167 aa13.55□□□□□ -0.24
POLR2J3-216ENST00000511773 EFSO43281 561 aa13.55□□□□□ -0.24
POLR2J3-216ENST00000511773 TRUB2O95900 331 aaKnown RBP13.55□□□□□ -0.24
POLR2J3-216ENST00000511773 F13A1P00488 732 aa13.55□□□□□ -0.24
POLR2J3-216ENST00000511773 CSF2P04141 144 aa13.55□□□□□ -0.24
POLR2J3-216ENST00000511773 NME1P15531 152 aaKnown RBP13.55□□□□□ -0.24
POLR2J3-216ENST00000511773 CHRNA3P32297 505 aa13.55□□□□□ -0.24
POLR2J3-216ENST00000511773 GGCXP38435 758 aa13.55□□□□□ -0.24
POLR2J3-216ENST00000511773 IRAK1P51617 712 aa13.55□□□□□ -0.24
POLR2J3-216ENST00000511773 OXCT1P55809 520 aa13.55□□□□□ -0.24
POLR2J3-216ENST00000511773 DNM1Q05193 864 aaKnown RBP13.55□□□□□ -0.24
POLR2J3-216ENST00000511773 SRSF6Q13247 344 aaKnown RBP13.55□□□□□ -0.24
POLR2J3-216ENST00000511773 CNGA2Q16280 664 aa13.55□□□□□ -0.24
POLR2J3-216ENST00000511773 TTC39BQ5VTQ0 682 aaPredicted RBP13.55□□□□□ -0.24
POLR2J3-216ENST00000511773 USP53Q70EK8 1073 aa13.55□□□□□ -0.24
POLR2J3-216ENST00000511773 CLEC14AQ86T13 490 aa13.55□□□□□ -0.24
POLR2J3-216ENST00000511773 PARGQ86W56 976 aa13.55□□□□□ -0.24
POLR2J3-216ENST00000511773 SH2D3CQ8N5H7 860 aa13.55□□□□□ -0.24
POLR2J3-216ENST00000511773 ATP6V0D2Q8N8Y2 350 aa13.55□□□□□ -0.24
POLR2J3-216ENST00000511773 LMX1AQ8TE12 382 aa13.55□□□□□ -0.24
POLR2J3-216ENST00000511773 GRAMD1AQ96CP6 724 aa13.55□□□□□ -0.24
POLR2J3-216ENST00000511773 ALG14Q96F25 216 aa13.55□□□□□ -0.24
POLR2J3-216ENST00000511773 PRMT1Q99873 361 aaKnown RBP13.55□□□□□ -0.24
POLR2J3-216ENST00000511773 NCKIPSDQ9NZQ3 722 aa13.55□□□□□ -0.24
POLR2J3-216ENST00000511773 IPO11Q9UI26 975 aaKnown RBP13.55□□□□□ -0.24
POLR2J3-216ENST00000511773 KLF15Q9UIH9 416 aa13.55□□□□□ -0.24
POLR2J3-216ENST00000511773 ATXN7L1Q9ULK2 861 aaPredicted RBP13.55□□□□□ -0.24
POLR2J3-216ENST00000511773 COQ4Q9Y3A0 265 aa13.55□□□□□ -0.24
POLR2J3-216ENST00000511773 FARP1Q9Y4F1 1045 aaPredicted RBP13.55□□□□□ -0.24
POLR2J3-216ENST00000511773 BSNQ9UPA5 3926 aa13.55□□□□□ -0.24
POLR2J3-216ENST00000511773 CCDC187A0A096LP49 1063 aa13.54□□□□□ -0.24
POLR2J3-216ENST00000511773 K7ELQ4 463 aaPredicted RBP13.54□□□□□ -0.24
POLR2J3-216ENST00000511773 K7ERQ8 282 aa13.54□□□□□ -0.24
POLR2J3-216ENST00000511773 RAD51BO15315 384 aa13.54□□□□□ -0.24
POLR2J3-216ENST00000511773 SART1O43290 800 aaKnown RBP13.54□□□□□ -0.24
POLR2J3-216ENST00000511773 AQP9O43315 295 aa13.54□□□□□ -0.24
POLR2J3-216ENST00000511773 TCEA3O75764 348 aa13.54□□□□□ -0.24
POLR2J3-216ENST00000511773 GJB6O95452 261 aa13.54□□□□□ -0.24
POLR2J3-216ENST00000511773 MT-CO1P00395 513 aa13.54□□□□□ -0.24
POLR2J3-216ENST00000511773 ITGA2BP08514 1039 aa13.54□□□□□ -0.24
POLR2J3-216ENST00000511773 ZSCAN22P10073 491 aaPredicted RBP13.54□□□□□ -0.24
POLR2J3-216ENST00000511773 SRCP12931 536 aa13.54□□□□□ -0.24
POLR2J3-216ENST00000511773 JUNDP17535 347 aa13.54□□□□□ -0.24
POLR2J3-216ENST00000511773 VASPP50552 380 aaPredicted RBP13.54□□□□□ -0.24
POLR2J3-216ENST00000511773 PDX1P52945 283 aa13.54□□□□□ -0.24
POLR2J3-216ENST00000511773 MCCD1P59942 119 aaPredicted RBP13.54□□□□□ -0.24
POLR2J3-216ENST00000511773 CCDC15Q0P6D6 951 aa13.54□□□□□ -0.24
POLR2J3-216ENST00000511773 DPYDQ12882 1025 aa13.54□□□□□ -0.24
POLR2J3-216ENST00000511773 STILQ15468 1287 aa13.54□□□□□ -0.24
POLR2J3-216ENST00000511773 TGIF1Q15583 401 aa13.54□□□□□ -0.24
POLR2J3-216ENST00000511773 FBXL22Q6P050 247 aa13.54□□□□□ -0.24
POLR2J3-216ENST00000511773 ERN2Q76MJ5 926 aaKnown RBP13.54□□□□□ -0.24
POLR2J3-216ENST00000511773 JAMLQ86YT9 394 aa13.54□□□□□ -0.24
POLR2J3-216ENST00000511773 PPM1KQ8N3J5 372 aa13.54□□□□□ -0.24
POLR2J3-216ENST00000511773 ATP11CQ8NB49 1132 aa13.54□□□□□ -0.24
POLR2J3-216ENST00000511773 CHST14Q8NCH0 376 aa13.54□□□□□ -0.24
POLR2J3-216ENST00000511773 KAT5Q92993 513 aa13.54□□□□□ -0.24
POLR2J3-216ENST00000511773 BMFQ96LC9 184 aa13.54□□□□□ -0.24
POLR2J3-216ENST00000511773 IL12RB2Q99665 862 aa13.54□□□□□ -0.24
POLR2J3-216ENST00000511773 MUC3BQ9H195 1237 aa13.54□□□□□ -0.24
POLR2J3-216ENST00000511773 STARD5Q9NSY2 213 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms