RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 SLC29A4Q7RTT9 530 aa5.82□□□□□ -1.48
HMGB1P47-201ENST00000511281 CNTROBQ8N137 903 aa5.82□□□□□ -1.48
HMGB1P47-201ENST00000511281 SCAIQ8N9R8 606 aa5.82□□□□□ -1.48
HMGB1P47-201ENST00000511281 HSPH1Q92598 858 aa5.82□□□□□ -1.48
HMGB1P47-201ENST00000511281 ZNF347Q96SE7 839 aa5.82□□□□□ -1.48
HMGB1P47-201ENST00000511281 NUAK2Q9H093 628 aa5.82□□□□□ -1.48
HMGB1P47-201ENST00000511281 SCPEP1Q9HB40 452 aa5.82□□□□□ -1.48
HMGB1P47-201ENST00000511281 TMEM5Q9Y2B1 443 aa5.82□□□□□ -1.48
HMGB1P47-201ENST00000511281 A0A1W2PQF6 199 aa5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 A0A1W2PRG0 241 aa5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 PABPN1LA6NDY0 278 aaKnown RBP5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 A8MZ25 164 aa5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 OR2C1O95371 312 aa5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 ADAP00813 363 aa5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 SERPINC1P01008 464 aa5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 NFKBIAP25963 317 aa5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 CTCFP49711 727 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 CYP4A11Q02928 519 aa5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 FOXI1Q12951 378 aa5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 SLC14A1Q13336 389 aa5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 PUM1Q14671 1186 aaKnown RBP eCLIP5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 GSTA3Q16772 222 aa5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 MFSD4BQ5TF39 518 aa5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 ATG9BQ674R7 924 aa5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 TXNDC8Q6A555 127 aa5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 TMEM65Q6PI78 240 aa5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 TMCO3Q6UWJ1 677 aa5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 PRSS45Q7RTY3 260 aa5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 ADGRF2Q8IZF7 708 aa5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 SRBD1Q8N5C6 995 aaKnown RBP5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 WDTC1Q8N5D0 677 aa5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 TMEM116Q8NCL8 245 aa5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 TMEM170AQ8WVE7 144 aa5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 REPS1Q96D71 796 aa5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 TEFMQ96QE5 360 aaKnown RBP5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 TIMP4Q99727 224 aa5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 MACROD1Q9BQ69 325 aa5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 SLF1Q9BQI6 1058 aa5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 FRMD8Q9BZ67 464 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 TXLNGYQ9BZA5 131 aa5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 ATP8A2Q9NTI2 1148 aa5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 C20orf141Q9NUB4 165 aa5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 ARL15Q9NXU5 204 aa5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 GRHL1Q9NZI5 618 aa5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 KIAA1456Q9P272 454 aa5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 NFKBIL1Q9UBC1 381 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 CORO1CQ9ULV4 474 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 HEMK1Q9Y5R4 338 aaPredicted RBP5.81□□□□□ -1.48
HMGB1P47-201ENST00000511281 SALL3Q9BXA9 1300 aa5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 A0A1W2PRQ8 180 aa5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 STRNO43815 780 aa5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 EXOC3O60645 756 aa5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 TACC1O75410 805 aa5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 CSPG5O95196 566 aa5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 DNTTP04053 509 aa5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 HEXAP06865 529 aa5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 GALTP07902 379 aa5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 AKR1A1P14550 325 aa5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 WT1P19544 449 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 FMO4P31512 558 aa5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 UBA7P41226 1012 aa5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 GARSP41250 739 aaKnown RBP5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 GABRB2P47870 512 aa5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 IFI35P80217 286 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 DGCR2P98153 550 aa5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 CRYMQ14894 314 aa5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 ANXA2RQ3ZCQ2 193 aa5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 RANBP10Q6VN20 620 aa5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 NAPRTQ6XQN6 538 aa5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 SLC46A3Q7Z3Q1 461 aa5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 GRASPQ7Z6J2 395 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 ANKRD23Q86SG2 305 aa5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 TADA2BQ86TJ2 420 aa5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 KLBQ86Z14 1044 aa5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 RHPN2Q8IUC4 686 aa5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 ARHGAP12Q8IWW6 846 aa5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 CADM4Q8NFZ8 388 aa5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 HDAC7Q8WUI4 952 aa5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 UBE2Q2Q8WVN8 375 aa5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 CCDC17Q96LX7 622 aa5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 ADAD1Q96M93 576 aaKnown RBP5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 ENTPD7Q9NQZ7 604 aa5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 ZNF70Q9UC06 446 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 ZNF215Q9UL58 517 aaPredicted RBP5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 MAFFQ9ULX9 164 aa5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 ADAM18Q9Y3Q7 739 aa5.8□□□□□ -1.48
HMGB1P47-201ENST00000511281 FRMD3A2A2Y4 597 aa5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 SYNDIG1LA6NDD5 238 aa5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 MYO1GB0I1T2 1018 aa5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 DKC1O60832 514 aaKnown RBP eCLIP5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 GJB3O75712 270 aa5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 JTBO76095 146 aa5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 ZNF202O95125 648 aa5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 DDAH2O95865 285 aa5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 CHRM5P08912 532 aaPredicted RBP5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 HOXB5P09067 269 aa5.79□□□□□ -1.48
HMGB1P47-201ENST00000511281 CYP2D6P10635 497 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms