RNA–Protein interactions for RNA: ENST00000510558.6

SNF8-209, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 1,051 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-209ENST00000510558 TBC1D3DA0A087WVF3 549 aa23.5■■□□□ 1.35
SNF8-209ENST00000510558 TBC1D3IA0A087WXS9 549 aa23.5■■□□□ 1.35
SNF8-209ENST00000510558 TBC1D3EA0A087X179 549 aa23.5■■□□□ 1.35
SNF8-209ENST00000510558 TBC1D3KA0A087X1G2 549 aa23.5■■□□□ 1.35
SNF8-209ENST00000510558 TBC1D3FA6NER0 549 aaPredicted RBP23.5■■□□□ 1.35
SNF8-209ENST00000510558 SIGLEC16A6NMB1 481 aa23.5■■□□□ 1.35
SNF8-209ENST00000510558 TBC1D3LB9A6J9 549 aa23.5■■□□□ 1.35
SNF8-209ENST00000510558 CBX4O00257 560 aa23.5■■□□□ 1.35
SNF8-209ENST00000510558 RTN2O75298 545 aa23.5■■□□□ 1.35
SNF8-209ENST00000510558 TBC1D3HP0C7X1 549 aa23.5■■□□□ 1.35
SNF8-209ENST00000510558 ZNF165P49910 485 aa23.5■■□□□ 1.35
SNF8-209ENST00000510558 PPP2CBP62714 309 aa23.5■■□□□ 1.35
SNF8-209ENST00000510558 PPP2CAP67775 309 aa23.5■■□□□ 1.35
SNF8-209ENST00000510558 GNA12Q03113 381 aa23.5■■□□□ 1.35
SNF8-209ENST00000510558 CNTN1Q12860 1018 aa23.5■■□□□ 1.35
SNF8-209ENST00000510558 KCNT1Q5JUK3 1230 aa23.5■■□□□ 1.35
SNF8-209ENST00000510558 AGBL4Q5VU57 503 aa23.5■■□□□ 1.35
SNF8-209ENST00000510558 TBC1D3GQ6DHY5 549 aa23.5■■□□□ 1.35
SNF8-209ENST00000510558 TBC1D3CQ6IPX1 549 aa23.5■■□□□ 1.35
SNF8-209ENST00000510558 DNAJC24Q6P3W2 148 aa23.5■■□□□ 1.35
SNF8-209ENST00000510558 C22orf39Q6P5X5 142 aa23.5■■□□□ 1.35
SNF8-209ENST00000510558 TBC1D3Q8IZP1 549 aaPredicted RBP23.5■■□□□ 1.35
SNF8-209ENST00000510558 CCDC185Q8N715 623 aa23.5■■□□□ 1.35
SNF8-209ENST00000510558 OR2A12Q8NGT7 310 aa23.5■■□□□ 1.35
SNF8-209ENST00000510558 SETD7Q8WTS6 366 aaKnown RBP23.5■■□□□ 1.35
SNF8-209ENST00000510558 BAP1Q92560 729 aa23.5■■□□□ 1.35
SNF8-209ENST00000510558 ACE2Q9BYF1 805 aaPredicted RBP23.5■■□□□ 1.35
SNF8-209ENST00000510558 KDM4CQ9H3R0 1056 aa23.5■■□□□ 1.35
SNF8-209ENST00000510558 ATP13A1Q9HD20 1204 aa23.5■■□□□ 1.35
SNF8-209ENST00000510558 MYO6Q9UM54 1294 aa23.5■■□□□ 1.35
SNF8-209ENST00000510558 PCDHGB2Q9Y5G2 931 aa23.5■■□□□ 1.35
SNF8-209ENST00000510558 TCRBV5S1A1TA0A578 114 aa23.49■■□□□ 1.35
SNF8-209ENST00000510558 VILLO15195 856 aa23.49■■□□□ 1.35
SNF8-209ENST00000510558 PLRG1O43660 514 aaKnown RBP23.49■■□□□ 1.35
SNF8-209ENST00000510558 CTSLP07711 333 aa23.49■■□□□ 1.35
SNF8-209ENST00000510558 CTSKP43235 329 aa23.49■■□□□ 1.35
SNF8-209ENST00000510558 TRIP6Q15654 476 aaKnown RBP23.49■■□□□ 1.35
SNF8-209ENST00000510558 FILIP1LQ4L180 1135 aa23.49■■□□□ 1.35
SNF8-209ENST00000510558 RWDD4Q6NW29 188 aaKnown RBP23.49■■□□□ 1.35
SNF8-209ENST00000510558 IRF2BP2Q7Z5L9 587 aa23.49■■□□□ 1.35
SNF8-209ENST00000510558 SCNM1Q9BWG6 230 aa23.49■■□□□ 1.35
SNF8-209ENST00000510558 AASDHPPTQ9NRN7 309 aa23.49■■□□□ 1.35
SNF8-209ENST00000510558 PCOLCE2Q9UKZ9 415 aa23.49■■□□□ 1.35
SNF8-209ENST00000510558 EPG5Q9HCE0 2579 aa23.48■■□□□ 1.35
SNF8-209ENST00000510558 FAM72CH0Y354 149 aa23.48■■□□□ 1.35
SNF8-209ENST00000510558 KCNK3O14649 394 aa23.48■■□□□ 1.35
SNF8-209ENST00000510558 LATO43561 262 aa23.48■■□□□ 1.35
SNF8-209ENST00000510558 CBFA2T3O75081 653 aa23.48■■□□□ 1.35
SNF8-209ENST00000510558 ZMPSTE24O75844 475 aa23.48■■□□□ 1.35
SNF8-209ENST00000510558 LRIG2O94898 1065 aa23.48■■□□□ 1.35
SNF8-209ENST00000510558 PLEKP08567 350 aaPredicted RBP23.48■■□□□ 1.35
SNF8-209ENST00000510558 CHRNA3P32297 505 aa23.48■■□□□ 1.35
SNF8-209ENST00000510558 C21orf59P57076 290 aa23.48■■□□□ 1.35
SNF8-209ENST00000510558 FAM72AQ5TYM5 149 aa23.48■■□□□ 1.35
SNF8-209ENST00000510558 ACAD10Q6JQN1 1059 aa23.48■■□□□ 1.35
SNF8-209ENST00000510558 FAM72DQ6L9T8 149 aa23.48■■□□□ 1.35
SNF8-209ENST00000510558 RETSATQ6NUM9 610 aa23.48■■□□□ 1.35
SNF8-209ENST00000510558 FAM72BQ86X60 149 aa23.48■■□□□ 1.35
SNF8-209ENST00000510558 NTAN1Q96AB6 310 aa23.48■■□□□ 1.35
SNF8-209ENST00000510558 SYT11Q9BT88 431 aa23.48■■□□□ 1.35
SNF8-209ENST00000510558 FUCA2Q9BTY2 467 aa23.48■■□□□ 1.35
SNF8-209ENST00000510558 MAGEB5Q9BZ81 275 aa23.48■■□□□ 1.35
SNF8-209ENST00000510558 TNKS2Q9H2K2 1166 aa23.48■■□□□ 1.35
SNF8-209ENST00000510558 NEU3Q9UQ49 428 aa23.48■■□□□ 1.35
SNF8-209ENST00000510558 CEP295Q9C0D2 2601 aa23.47■■□□□ 1.35
SNF8-209ENST00000510558 ANKRD62A6NC57 917 aa23.47■■□□□ 1.35
SNF8-209ENST00000510558 H0Y8X5 98 aa23.47■■□□□ 1.35
SNF8-209ENST00000510558 FLRT2O43155 660 aa23.47■■□□□ 1.35
SNF8-209ENST00000510558 CCP110O43303 1012 aa23.47■■□□□ 1.35
SNF8-209ENST00000510558 HYAL3O43820 417 aaPredicted RBP23.47■■□□□ 1.35
SNF8-209ENST00000510558 WNT1P04628 370 aa23.47■■□□□ 1.35
SNF8-209ENST00000510558 RHOQP17081 205 aa23.47■■□□□ 1.35
SNF8-209ENST00000510558 TNFAIP3P21580 790 aa23.47■■□□□ 1.35
SNF8-209ENST00000510558 MAPKAPK2P49137 400 aa23.47■■□□□ 1.35
SNF8-209ENST00000510558 SERPINH1P50454 418 aaKnown RBP23.47■■□□□ 1.35
SNF8-209ENST00000510558 ARF5P84085 180 aa23.47■■□□□ 1.35
SNF8-209ENST00000510558 SLC20A2Q08357 652 aa23.47■■□□□ 1.35
SNF8-209ENST00000510558 ZNF423Q2M1K9 1284 aa23.47■■□□□ 1.35
SNF8-209ENST00000510558 DBX2Q6ZNG2 339 aa23.47■■□□□ 1.35
SNF8-209ENST00000510558 NLRP14Q86W24 1093 aa23.47■■□□□ 1.35
SNF8-209ENST00000510558 MCOLN2Q8IZK6 566 aa23.47■■□□□ 1.35
SNF8-209ENST00000510558 CHST14Q8NCH0 376 aa23.47■■□□□ 1.35
SNF8-209ENST00000510558 TMIEQ8NEW7 156 aa23.47■■□□□ 1.35
SNF8-209ENST00000510558 SKA1Q96BD8 255 aa23.47■■□□□ 1.35
SNF8-209ENST00000510558 TBC1D31Q96DN5 1066 aa23.47■■□□□ 1.35
SNF8-209ENST00000510558 SERAC1Q96JX3 654 aa23.47■■□□□ 1.35
SNF8-209ENST00000510558 MCEEQ96PE7 176 aa23.47■■□□□ 1.35
SNF8-209ENST00000510558 RETREG1Q9H6L5 497 aa23.47■■□□□ 1.35
SNF8-209ENST00000510558 NDFIP2Q9NV92 336 aa23.47■■□□□ 1.35
SNF8-209ENST00000510558 TMEM248Q9NWD8 314 aa23.47■■□□□ 1.35
SNF8-209ENST00000510558 LRRC53A6NM62 1247 aa23.46■■□□□ 1.35
SNF8-209ENST00000510558 KPNA3O00505 521 aaPredicted RBP23.46■■□□□ 1.35
SNF8-209ENST00000510558 WNT9AO14904 365 aa23.46■■□□□ 1.35
SNF8-209ENST00000510558 TRIM16O95361 564 aa23.46■■□□□ 1.35
SNF8-209ENST00000510558 PRNPP04156 253 aa23.46■■□□□ 1.35
SNF8-209ENST00000510558 CD38P28907 300 aa23.46■■□□□ 1.35
SNF8-209ENST00000510558 ACVRL1P37023 503 aa23.46■■□□□ 1.35
SNF8-209ENST00000510558 ETFBP38117 255 aa23.46■■□□□ 1.35
SNF8-209ENST00000510558 RECQLP46063 649 aaPredicted RBP23.46■■□□□ 1.35
SNF8-209ENST00000510558 CCT8P50990 548 aa23.46■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms