RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 CUL3Q13618 768 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 PPP2R5DQ14738 602 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 GRM3Q14832 879 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 ADGRG6Q86SQ4 1221 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 USP33Q8TEY7 942 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 UCMAQ8WVF2 138 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 JADE3Q92613 823 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 LPPQ93052 612 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 TSGA13Q96PP4 275 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 TRIM62Q9BVG3 475 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 GATA5Q9BWX5 397 aaPredicted RBP18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 ACE2Q9BYF1 805 aaPredicted RBP18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 RHOBTB2Q9BYZ6 727 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 OSBPL2Q9H1P3 480 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 RHOJQ9H4E5 214 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 CYP4F11Q9HBI6 524 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 S100A14Q9HCY8 104 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 CHST12Q9NRB3 414 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 MIOSQ9NXC5 875 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 DLGAP2Q9P1A6 1054 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 CDH22Q9UJ99 828 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 ARL5CA6NH57 179 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 CASTOR2A6NHX0 329 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 PALM2-AKAP2B1ALY0 433 aaPredicted RBP18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 DFFAO00273 331 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 COX4I1P13073 169 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 SAT1P21673 171 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 PSEN1P49768 467 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 AFF1P51825 1210 aaKnown RBP18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 USP10Q14694 798 aaKnown RBP18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 CCL14Q16627 93 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 UGP2Q16851 508 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 SLC9B1Q4ZJI4 515 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 IZUMO2Q6UXV1 221 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 LCA5Q86VQ0 697 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 METTL23Q86XA0 190 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 KBTBD2Q8IY47 623 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 PHTF2Q8N3S3 785 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 TCF7L2Q9NQB0 619 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 MAN1C1Q9NR34 630 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 PPM1HQ9ULR3 514 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 GIT1Q9Y2X7 761 aa18.24■□□□□ 0.51
CCHCR1-228ENST00000509552 MAGEA13PA6NCF6 341 aa18.23■□□□□ 0.51
CCHCR1-228ENST00000509552 CCNCP24863 283 aa18.23■□□□□ 0.51
CCHCR1-228ENST00000509552 SCNN1GP51170 649 aa18.23■□□□□ 0.51
CCHCR1-228ENST00000509552 HK2P52789 917 aa18.23■□□□□ 0.51
CCHCR1-228ENST00000509552 GSTA3Q16772 222 aa18.23■□□□□ 0.51
CCHCR1-228ENST00000509552 PCID2Q5JVF3 399 aa18.23■□□□□ 0.51
CCHCR1-228ENST00000509552 LIPMQ5VYY2 423 aa18.23■□□□□ 0.51
CCHCR1-228ENST00000509552 PGM2L1Q6PCE3 622 aa18.23■□□□□ 0.51
CCHCR1-228ENST00000509552 ZYG11AQ6WRX3 759 aa18.23■□□□□ 0.51
CCHCR1-228ENST00000509552 OTOP3Q7RTS5 596 aa18.23■□□□□ 0.51
CCHCR1-228ENST00000509552 ZC3HC1Q86WB0 502 aaKnown RBP18.23■□□□□ 0.51
CCHCR1-228ENST00000509552 DEFB107AQ8IZN7 70 aa18.23■□□□□ 0.51
CCHCR1-228ENST00000509552 ATPAF2Q8N5M1 289 aa18.23■□□□□ 0.51
CCHCR1-228ENST00000509552 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.23■□□□□ 0.51
CCHCR1-228ENST00000509552 ACVR1CQ8NER5 493 aa18.23■□□□□ 0.51
CCHCR1-228ENST00000509552 ZSCAN18Q8TBC5 510 aaPredicted RBP18.23■□□□□ 0.51
CCHCR1-228ENST00000509552 SCYL1Q96KG9 808 aa18.23■□□□□ 0.51
CCHCR1-228ENST00000509552 RAP2CQ9Y3L5 183 aa18.23■□□□□ 0.51
CCHCR1-228ENST00000509552 SHROOM3Q8TF72 1996 aa18.23■□□□□ 0.51
CCHCR1-228ENST00000509552 ANXA9O76027 345 aa18.23■□□□□ 0.51
CCHCR1-228ENST00000509552 ITGAXP20702 1163 aa18.23■□□□□ 0.51
CCHCR1-228ENST00000509552 BDNFP23560 247 aa18.23■□□□□ 0.51
CCHCR1-228ENST00000509552 BTKQ06187 659 aa18.23■□□□□ 0.51
CCHCR1-228ENST00000509552 KLF10Q13118 480 aa18.23■□□□□ 0.51
CCHCR1-228ENST00000509552 SLC12A1Q13621 1099 aa18.23■□□□□ 0.51
CCHCR1-228ENST00000509552 TIGD5Q53EQ6 642 aa18.23■□□□□ 0.51
CCHCR1-228ENST00000509552 FRMD7Q6ZUT3 714 aa18.23■□□□□ 0.51
CCHCR1-228ENST00000509552 CNTD1Q8N815 330 aa18.23■□□□□ 0.51
CCHCR1-228ENST00000509552 AGR3Q8TD06 166 aa18.23■□□□□ 0.51
CCHCR1-228ENST00000509552 DQX1Q8TE96 717 aaKnown RBP18.23■□□□□ 0.51
CCHCR1-228ENST00000509552 DPF3Q92784 378 aa18.23■□□□□ 0.51
CCHCR1-228ENST00000509552 TBL1YQ9BQ87 522 aa18.23■□□□□ 0.51
CCHCR1-228ENST00000509552 SIK2Q9H0K1 926 aa18.23■□□□□ 0.51
CCHCR1-228ENST00000509552 DMAP1Q9NPF5 467 aaPredicted RBP18.23■□□□□ 0.51
CCHCR1-228ENST00000509552 NUP205Q92621 2012 aa18.22■□□□□ 0.51
CCHCR1-228ENST00000509552 CCDC78A2IDD5 438 aa18.22■□□□□ 0.51
CCHCR1-228ENST00000509552 CACNG3O60359 315 aa18.22■□□□□ 0.51
CCHCR1-228ENST00000509552 CABYRO75952 493 aa18.22■□□□□ 0.51
CCHCR1-228ENST00000509552 CRABP2P29373 138 aa18.22■□□□□ 0.51
CCHCR1-228ENST00000509552 UPP1Q16831 310 aa18.22■□□□□ 0.51
CCHCR1-228ENST00000509552 PKN3Q6P5Z2 889 aa18.22■□□□□ 0.51
CCHCR1-228ENST00000509552 C2orf69Q8N8R5 385 aa18.22■□□□□ 0.51
CCHCR1-228ENST00000509552 SLC26A7Q8TE54 656 aa18.22■□□□□ 0.51
CCHCR1-228ENST00000509552 ECSITQ9BQ95 431 aa18.22■□□□□ 0.51
CCHCR1-228ENST00000509552 ACBD6Q9BR61 282 aa18.22■□□□□ 0.51
CCHCR1-228ENST00000509552 RTKNQ9BST9 563 aa18.22■□□□□ 0.51
CCHCR1-228ENST00000509552 SYT17Q9BSW7 474 aa18.22■□□□□ 0.51
CCHCR1-228ENST00000509552 DRC3Q9H069 523 aa18.22■□□□□ 0.51
CCHCR1-228ENST00000509552 ZBTB14O43829 449 aa18.22■□□□□ 0.51
CCHCR1-228ENST00000509552 PDE5AO76074 875 aa18.22■□□□□ 0.51
CCHCR1-228ENST00000509552 SP100P23497 879 aaPredicted RBP18.22■□□□□ 0.51
CCHCR1-228ENST00000509552 GRIA4P48058 902 aa18.22■□□□□ 0.51
CCHCR1-228ENST00000509552 RPL14P50914 215 aaKnown RBP18.22■□□□□ 0.51
CCHCR1-228ENST00000509552 TBL3Q12788 808 aaKnown RBP18.22■□□□□ 0.51
CCHCR1-228ENST00000509552 KLHDC8BQ8IXV7 354 aa18.22■□□□□ 0.51
CCHCR1-228ENST00000509552 SCML4Q8N228 414 aa18.22■□□□□ 0.51
CCHCR1-228ENST00000509552 SPATA22Q8NHS9 363 aa18.22■□□□□ 0.51
CCHCR1-228ENST00000509552 PYDC1Q8WXC3 89 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms