RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 IFT22Q9H7X7 185 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 KRT84Q9NSB2 600 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.67□□□□□ -1.66
NIPBL-206ENST00000509429 SNTG1Q9NSN8 517 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 ZBTB40Q9NUA8 1239 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 COQ3Q9NZJ6 369 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 KLHL9Q9P2J3 617 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 CRNNQ9UBG3 495 aaPredicted RBP4.67□□□□□ -1.66
NIPBL-206ENST00000509429 GRHPRQ9UBQ7 328 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 ASIC3Q9UHC3 531 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 CIDEBQ9UHD4 219 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 SLC7A8Q9UHI5 535 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 LCMT1Q9UIC8 334 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 TLK1Q9UKI8 766 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 ARHGAP26Q9UNA1 814 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 RUVBL1Q9Y265 456 aaKnown RBP4.67□□□□□ -1.66
NIPBL-206ENST00000509429 TNFSF13BQ9Y275 285 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 COMMD3-BMI1R4GMX3 469 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 PZPP20742 1482 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 IFT140Q96RY7 1462 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 KIAA0586Q9BVV6 1533 aa4.67□□□□□ -1.66
NIPBL-206ENST00000509429 EIF4G3O43432 1585 aaKnown RBP4.66□□□□□ -1.66
NIPBL-206ENST00000509429 ABCC5O15440 1437 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 RNF17Q9BXT8 1623 aaKnown RBP4.66□□□□□ -1.66
NIPBL-206ENST00000509429 A0A0U1RQK1 487 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 C1orf232A0A0U1RR37 186 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 FRMD3A2A2Y4 597 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 ZNF320A2RRD8 509 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 GOLGA8IPA6NC78 632 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 TRIM43BA6NCK2 446 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 K7ESF4 209 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 KMOO15229 486 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 PROM1O43490 865 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 BUB1O43683 1085 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 ATP5HO75947 161 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 RECQL4O94761 1208 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 PRKD3O94806 890 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 SEC31AO94979 1220 aaKnown RBP4.66□□□□□ -1.66
NIPBL-206ENST00000509429 CLPTM1O96005 669 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 ALDH2P05091 517 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 DLDP09622 509 aaKnown RBP4.66□□□□□ -1.66
NIPBL-206ENST00000509429 TMIGD3P0DMS9 266 aaPredicted RBP4.66□□□□□ -1.66
NIPBL-206ENST00000509429 TXNP10599 105 aaKnown RBP4.66□□□□□ -1.66
NIPBL-206ENST00000509429 IFNAR1P17181 557 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 GLRA2P23416 452 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 GPTP24298 496 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 ALDH4A1P30038 563 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 RFC2P35250 354 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 MLH1P40692 756 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 PPP1R2P41236 205 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 DHPSP49366 369 aaPredicted RBP4.66□□□□□ -1.66
NIPBL-206ENST00000509429 AMPHP49418 695 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 HUNKP57058 714 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 EIF3EP60228 445 aaKnown RBP4.66□□□□□ -1.66
NIPBL-206ENST00000509429 TSPAN5P62079 268 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 YWHAZP63104 245 aaKnown RBP4.66□□□□□ -1.66
NIPBL-206ENST00000509429 ARF5P84085 180 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 DSC2Q02487 901 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 TAP2Q03519 686 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 CHIT1Q13231 466 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 ITGB3BPQ13352 177 aaPredicted RBP4.66□□□□□ -1.66
NIPBL-206ENST00000509429 PLD1Q13393 1074 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 TRIM25Q14258 630 aaKnown RBP4.66□□□□□ -1.66
NIPBL-206ENST00000509429 ARHGAP19Q14CB8 494 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 TAF5Q15542 800 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 NFIL3Q16649 462 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 RGS21Q2M5E4 152 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 INAVAQ3KP66 663 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 PABPC1LQ4VXU2 614 aaKnown RBP4.66□□□□□ -1.66
NIPBL-206ENST00000509429 FSCBQ5H9T9 825 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 FAM209AQ5JX71 171 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 PIK3R6Q5UE93 754 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 HAUS3Q68CZ6 603 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 SIGIRRQ6IA17 410 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 PPP1R2P3Q6NXS1 205 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 JMJD6Q6NYC1 403 aaPredicted RBP4.66□□□□□ -1.66
NIPBL-206ENST00000509429 METTL2BQ6P1Q9 378 aaKnown RBP4.66□□□□□ -1.66
NIPBL-206ENST00000509429 TAF2Q6P1X5 1199 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 FAM171BQ6P995 826 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 LRRC55Q6ZSA7 311 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 TADA2BQ86TJ2 420 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 ADCK1Q86TW2 530 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 MTDHQ86UE4 582 aaKnown RBP4.66□□□□□ -1.66
NIPBL-206ENST00000509429 AKAP14Q86UN6 197 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 MICU3Q86XE3 530 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 STX12Q86Y82 276 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 PSTKQ8IV42 348 aaKnown RBP4.66□□□□□ -1.66
NIPBL-206ENST00000509429 LRRC34Q8IZ02 419 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 ST13P4Q8IZP2 240 aaPredicted RBP4.66□□□□□ -1.66
NIPBL-206ENST00000509429 CACNA2D3Q8IZS8 1091 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 SYCP3Q8IZU3 236 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 BOLLQ8N9W6 283 aaKnown RBP4.66□□□□□ -1.66
NIPBL-206ENST00000509429 FAM156AQ8NDB6 213 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 SLC35G2Q8TBE7 412 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 CREB3L4Q8TEY5 395 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 SCFD2Q8WU76 684 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 MAIP1Q8WWC4 291 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 ATL1Q8WXF7 558 aa4.66□□□□□ -1.66
NIPBL-206ENST00000509429 DDX17Q92841 729 aaKnown RBP4.66□□□□□ -1.66
NIPBL-206ENST00000509429 TRIM43Q96BQ3 446 aaPredicted RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms