RNA–Protein interactions for RNA: ENST00000509384.5

LYSMD3-204, Transcript of LysM domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LYSMD3, Length 1,538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-204ENST00000509384 CCL26Q9Y258 94 aa12.86□□□□□ -0.35
LYSMD3-204ENST00000509384 TBC1D30Q9Y2I9 924 aa12.86□□□□□ -0.35
LYSMD3-204ENST00000509384 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.86□□□□□ -0.35
LYSMD3-204ENST00000509384 LAMA3Q16787 3333 aa12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 A0A0D9SEW6 157 aa12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 ERI2A8K979 691 aaKnown RBP12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 H0Y626 953 aa12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 LUC7L3O95232 432 aaKnown RBP12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 PAPLNO95428 1278 aa12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 PRAMEF12O95522 483 aa12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 AP2A1O95782 977 aa12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 HLA-DQB2P05538 268 aa12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 ABHD2P08910 425 aa12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 OXCT1P55809 520 aa12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 ZNF844Q08AG5 666 aa12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 CDH18Q13634 790 aa12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 KCNC3Q14003 757 aa12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 CCDC38Q502W7 563 aa12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 MPPE1Q53F39 396 aa12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 TMCO4Q5TGY1 634 aa12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 MARC1Q5VT66 337 aa12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 CXorf57Q6NSI4 855 aaKnown RBP12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 ZNF783Q6ZMS7 281 aa12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 ZNF534Q76KX8 674 aa12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 OTOP3Q7RTS5 596 aa12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 CAND1Q86VP6 1230 aaKnown RBP12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 ATP11CQ8NB49 1132 aa12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 FBXO36Q8NEA4 188 aa12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 OR7D4Q8NG98 312 aa12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 OR52K2Q8NGK3 314 aa12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 DDI1Q8WTU0 396 aa12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 ZNF419Q96HQ0 510 aaPredicted RBP12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 GORASP1Q9BQQ3 440 aa12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 SPON2Q9BUD6 331 aa12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 MUC3BQ9H195 1237 aa12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 NSUN3Q9H649 340 aaKnown RBP12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 VPS37BQ9H9H4 285 aa12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 ATP13A1Q9HD20 1204 aa12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 CHMP2BQ9UQN3 213 aa12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 ANAPC1Q9H1A4 1944 aa12.85□□□□□ -0.35
LYSMD3-204ENST00000509384 OBSL1O75147 1896 aa12.84□□□□□ -0.35
LYSMD3-204ENST00000509384 PSMD3O43242 534 aa12.84□□□□□ -0.35
LYSMD3-204ENST00000509384 CACNG3O60359 315 aa12.84□□□□□ -0.35
LYSMD3-204ENST00000509384 AVILO75366 819 aa12.84□□□□□ -0.35
LYSMD3-204ENST00000509384 ANXA9O76027 345 aa12.84□□□□□ -0.35
LYSMD3-204ENST00000509384 SYF2O95926 243 aaKnown RBP12.84□□□□□ -0.35
LYSMD3-204ENST00000509384 CYBBP04839 570 aa12.84□□□□□ -0.35
LYSMD3-204ENST00000509384 MYZAPP0CAP1 466 aa12.84□□□□□ -0.35
LYSMD3-204ENST00000509384 MLNP12872 115 aa12.84□□□□□ -0.35
LYSMD3-204ENST00000509384 HOXD9P28356 352 aaPredicted RBP12.84□□□□□ -0.35
LYSMD3-204ENST00000509384 ELK3P41970 407 aa12.84□□□□□ -0.35
LYSMD3-204ENST00000509384 MAGEA3P43357 314 aa12.84□□□□□ -0.35
LYSMD3-204ENST00000509384 MMP13P45452 471 aa12.84□□□□□ -0.35
LYSMD3-204ENST00000509384 USP4Q13107 963 aa12.84□□□□□ -0.35
LYSMD3-204ENST00000509384 CBLBQ13191 982 aa12.84□□□□□ -0.35
LYSMD3-204ENST00000509384 ZNF77Q15935 545 aa12.84□□□□□ -0.35
LYSMD3-204ENST00000509384 KRT71Q3SY84 523 aa12.84□□□□□ -0.35
LYSMD3-204ENST00000509384 RARS2Q5T160 578 aaKnown RBP12.84□□□□□ -0.35
LYSMD3-204ENST00000509384 MPP7Q5T2T1 576 aa12.84□□□□□ -0.35
LYSMD3-204ENST00000509384 RNF219Q5W0B1 726 aaPredicted RBP12.84□□□□□ -0.35
LYSMD3-204ENST00000509384 LRRC8BQ6P9F7 803 aa12.84□□□□□ -0.35
LYSMD3-204ENST00000509384 CAPN12Q6ZSI9 719 aa12.84□□□□□ -0.35
LYSMD3-204ENST00000509384 CCDC117Q8IWD4 279 aaPredicted RBP12.84□□□□□ -0.35
LYSMD3-204ENST00000509384 TEX26Q8N6G2 289 aa12.84□□□□□ -0.35
LYSMD3-204ENST00000509384 ITFG1Q8TB96 612 aa12.84□□□□□ -0.35
LYSMD3-204ENST00000509384 BHMTQ93088 406 aa12.84□□□□□ -0.35
LYSMD3-204ENST00000509384 LRRC39Q96DD0 335 aa12.84□□□□□ -0.35
LYSMD3-204ENST00000509384 ZNF599Q96NL3 588 aa12.84□□□□□ -0.35
LYSMD3-204ENST00000509384 FCRL5Q96RD9 977 aa12.84□□□□□ -0.35
LYSMD3-204ENST00000509384 WDR83Q9BRX9 315 aaKnown RBP12.84□□□□□ -0.35
LYSMD3-204ENST00000509384 MLPHQ9BV36 600 aaPredicted RBP12.84□□□□□ -0.35
LYSMD3-204ENST00000509384 LRRC40Q9H9A6 602 aa12.84□□□□□ -0.35
LYSMD3-204ENST00000509384 LRRC4CQ9HCJ2 640 aa12.84□□□□□ -0.35
LYSMD3-204ENST00000509384 NT5MQ9NPB1 228 aa12.84□□□□□ -0.35
LYSMD3-204ENST00000509384 AAR2Q9Y312 384 aaKnown RBP12.84□□□□□ -0.35
LYSMD3-204ENST00000509384 A0A087WUV0 522 aaPredicted RBP12.83□□□□□ -0.35
LYSMD3-204ENST00000509384 KDELR3O43731 214 aa12.83□□□□□ -0.35
LYSMD3-204ENST00000509384 SUN1O94901 812 aa12.83□□□□□ -0.35
LYSMD3-204ENST00000509384 CPP00450 1065 aa12.83□□□□□ -0.35
LYSMD3-204ENST00000509384 TSHRP16473 764 aa12.83□□□□□ -0.35
LYSMD3-204ENST00000509384 PHBP35232 272 aa12.83□□□□□ -0.35
LYSMD3-204ENST00000509384 GRIA1P42261 906 aa12.83□□□□□ -0.35
LYSMD3-204ENST00000509384 IFNAR2P48551 515 aa12.83□□□□□ -0.35
LYSMD3-204ENST00000509384 NUMBP49757 651 aa12.83□□□□□ -0.35
LYSMD3-204ENST00000509384 GEMP55040 296 aa12.83□□□□□ -0.35
LYSMD3-204ENST00000509384 TNK2Q07912 1038 aa12.83□□□□□ -0.35
LYSMD3-204ENST00000509384 SLC10A7Q0GE19 358 aa12.83□□□□□ -0.35
LYSMD3-204ENST00000509384 SPARCL1Q14515 664 aa12.83□□□□□ -0.35
LYSMD3-204ENST00000509384 ZNF235Q14590 738 aa12.83□□□□□ -0.35
LYSMD3-204ENST00000509384 LBRQ14739 615 aaKnown RBP12.83□□□□□ -0.35
LYSMD3-204ENST00000509384 CBX2Q14781 532 aaPredicted RBP12.83□□□□□ -0.35
LYSMD3-204ENST00000509384 TCEAL5Q5H9L2 206 aa12.83□□□□□ -0.35
LYSMD3-204ENST00000509384 KCTD11Q693B1 232 aa12.83□□□□□ -0.35
LYSMD3-204ENST00000509384 TPGS1Q6ZTW0 290 aa12.83□□□□□ -0.35
LYSMD3-204ENST00000509384 ARID3BQ8IVW6 561 aaPredicted RBP12.83□□□□□ -0.35
LYSMD3-204ENST00000509384 MFN1Q8IWA4 741 aa12.83□□□□□ -0.35
LYSMD3-204ENST00000509384 PALM2Q8IXS6 379 aa12.83□□□□□ -0.35
LYSMD3-204ENST00000509384 BBS5Q8N3I7 341 aa12.83□□□□□ -0.35
LYSMD3-204ENST00000509384 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.83□□□□□ -0.35
LYSMD3-204ENST00000509384 FAM76AQ8TAV0 307 aa12.83□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms