RNA–Protein interactions for RNA: ENST00000508910.5

POLR2J3-214, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-214ENST00000508910 VPS41P49754 854 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 RENBPP51606 427 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 PLK1P53350 603 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 TERF1P54274 439 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 NRLP54845 237 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 DRG2P55039 364 aaKnown RBP11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 GPS1Q13098 491 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 RFTN1Q14699 578 aaPredicted RBP11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 ITPRIPL2Q3MIP1 535 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 FUT11Q495W5 492 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 TEX44Q53QW1 395 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 PITRM1Q5JRX3 1037 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 ANKRD20A2Q5SQ80 823 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 ANKRD20A1Q5TYW2 823 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 ANKRD20A3Q5VUR7 823 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 ITPRIPL1Q6GPH6 555 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 RETSATQ6NUM9 610 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 ETFBKMTQ8IXQ9 262 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 IFT20Q8IY31 132 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 AHI1Q8N157 1196 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 ZNF567Q8N184 647 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 BBS5Q8N3I7 341 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 BBOF1Q8ND07 529 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 CCDC110Q8TBZ0 833 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 WFIKKN2Q8TEU8 576 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 ACDQ96AP0 544 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 LRRC45Q96CN5 670 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 IL12RB2Q99665 862 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 RPP25Q9BUL9 199 aaKnown RBP11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 CEP41Q9BYV8 373 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 TRIM31Q9BZY9 425 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 DPH5Q9H2P9 285 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 EPB41L5Q9HCM4 733 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 GDF3Q9NR23 364 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 FAM114A2Q9NRY5 505 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 HAUS2Q9NVX0 235 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 IGSF9Q9P2J2 1179 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 VPS51Q9UID3 782 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 FBXO10Q9UK96 956 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 SLC27A6Q9Y2P4 619 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 EYSQ5T1H1 3165 aa11.11□□□□□ -0.63
POLR2J3-214ENST00000508910 MYOFQ9NZM1 2061 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 UQCRHLA0A096LP55 91 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 ESYT3A0FGR9 886 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 OTOL1A6NHN0 477 aaPredicted RBP11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 SNAP91O60641 907 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 TULP3O75386 442 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 ZMPSTE24O75844 475 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 SEC31AO94979 1220 aaKnown RBP11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 UQCRHP07919 91 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 GLDCP23378 1020 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 TNFRSF8P28908 595 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 FDFT1P37268 417 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 EIF2DP41214 584 aaKnown RBP11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 MMP13P45452 471 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 RPL21P46778 160 aaKnown RBP11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 ARF5P84085 180 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 SULT2A1Q06520 285 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 CALCOCO2Q13137 446 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 CUL1Q13616 776 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 ZNF235Q14590 738 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 LBRQ14739 615 aaKnown RBP11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 NAA30Q147X3 362 aaPredicted RBP11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 AAK1Q2M2I8 961 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 GAB4Q2WGN9 574 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 MARC1Q5VT66 337 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 ASTLQ6HA08 431 aaPredicted RBP11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 GRAMD4Q6IC98 578 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 WDR93Q6P2C0 686 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 KIAA0907Q7Z7F0 614 aaPredicted RBP11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 PRUNE1Q86TP1 453 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 METTL3Q86U44 580 aaKnown RBP11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 C12orf40Q86WS4 652 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 APCDD1Q8J025 514 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 TEX26Q8N6G2 289 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 NAT16Q8N8M0 369 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 CSGALNACT1Q8TDX6 532 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 USP33Q8TEY7 942 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 CASKIN2Q8WXE0 1202 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 TEKT5Q96M29 485 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 PPP1R2P1Q96PQ5 205 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 PNKPQ96T60 521 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 FAM129AQ9BZQ8 928 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 GBA3Q9H227 469 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 KCNK12Q9HB15 430 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 RBM22Q9NW64 420 aaKnown RBP eCLIP11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 GTSE1Q9NYZ3 720 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 WHRNQ9P202 907 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 DEC1Q9P2X7 70 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 LIMD1Q9UGP4 676 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 SEPT3Q9UH03 358 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 RSPH14Q9UHP6 348 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 INTS6Q9UL03 887 aaKnown RBP11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 SNX24Q9Y343 169 aa11.1□□□□□ -0.63
POLR2J3-214ENST00000508910 COL4A2P08572 1712 aa11.09□□□□□ -0.63
POLR2J3-214ENST00000508910 TICRRQ7Z2Z1 1910 aa11.09□□□□□ -0.63
POLR2J3-214ENST00000508910 DNALI1O14645 258 aaPredicted RBP11.09□□□□□ -0.63
POLR2J3-214ENST00000508910 HLA-DQB2P05538 268 aa11.09□□□□□ -0.63
POLR2J3-214ENST00000508910 CISD3P0C7P0 127 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms