RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 KIF2AO00139 706 aaPredicted RBP4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 RNF103O00237 685 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 WDR46O15213 610 aaKnown RBP4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 VEGFDO43915 354 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 ALDH1A2O94788 518 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 NDUFA10O95299 355 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 NTSR2O95665 410 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 CYP21A2P08686 494 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 SPARCP09486 303 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 PRR35P0CG20 571 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 XRCC6P12956 609 aaKnown RBP eCLIP4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 PRDX5P30044 214 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 GDI1P31150 447 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 APOBEC3AP31941 199 aaPredicted RBP4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 SLC6A9P48067 706 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 SOX8P57073 446 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 EIF4A1P60842 406 aaKnown RBP4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 ACTR1AP61163 376 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 ARHGAP8P85298 464 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 TLE1Q04724 770 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 EXOSC9Q06265 439 aaKnown RBP4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 CD69Q07108 199 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 RALGDSQ12967 914 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 CUL2Q13617 745 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 PCLAFQ15004 111 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 SLC39A12Q504Y0 691 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 NHSL2Q5HYW2 709 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 NAA35Q5VZE5 725 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 KRT80Q6KB66 452 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 KIAA1841Q6NSI8 718 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 SLC25A24Q6NUK1 477 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 CRELD2Q6UXH1 353 aaPredicted RBP4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 Q6YL49 198 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 RAB11FIP2Q7L804 512 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 FAM90A1Q86YD7 464 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 FBXW8Q8N3Y1 598 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 SFRP1Q8N474 314 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 DCLK2Q8N568 766 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 MRPL43Q8N983 215 aaKnown RBP4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 PCSK9Q8NBP7 692 aaKnown RBP4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 RSC1A1Q92681 617 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 CAVIN3Q969G5 261 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 TEKT1Q969V4 418 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 ZNF396Q96N95 335 aaPredicted RBP4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 NR1H4Q96RI1 486 aaPredicted RBP4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 NAA11Q9BSU3 229 aaPredicted RBP4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 SOX7Q9BT81 388 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 SLC46A2Q9BY10 475 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 ZNF518BQ9C0D4 1074 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 PITHD1Q9GZP4 211 aaPredicted RBP4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 ENKD1Q9H0I2 346 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 WDCPQ9H6R7 721 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 CRLF2Q9HC73 371 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 ZNF304Q9HCX3 659 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 RBM12Q9NTZ6 932 aaKnown RBP4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 TDP1Q9NUW8 608 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 MARCH4Q9P2E8 410 aaPredicted RBP4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 IL19Q9UHD0 177 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 CNOT7Q9UIV1 285 aaKnown RBP4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 MED16Q9Y2X0 877 aa4.49□□□□□ -1.69
SMARCA5-202ENST00000508573 ZNF804BA4D1E1 1349 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 ZNF335Q9H4Z2 1342 aaPredicted RBP4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 ST20-MTHFSA0A0A6YYL1 179 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 FAM90A20PA6NIJ5 464 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 LRRC72A6NJI9 287 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 GPR89AB7ZAQ6 455 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 TNFSF14O43557 240 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 CEP104O60308 925 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 OPHN1O60890 802 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 PPP6R2O75170 966 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 E2F6O75461 281 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 NCR1O76036 304 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 DDHD2O94830 711 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 PCDH8O95206 1070 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 EPN2O95208 641 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 CCNDBP1O95273 360 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 OR2C1O95371 312 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 GLP2RO95838 553 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 TUBBP07437 444 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 SUPT20HL2P0C7V6 817 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 GPR89BP0CG08 455 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 MYBL1P10243 752 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 CD9P21926 228 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 IL1R2P27930 398 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 ADSSP30520 456 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 SOX6P35712 828 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 PPARGP37231 505 aaPredicted RBP4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 CASP3P42574 277 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 CAMLGP49069 296 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 ZNF81P51508 661 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 RBM5P52756 815 aaKnown RBP eCLIP4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 ALDH18A1P54886 795 aaKnown RBP4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 DEUP1Q05D60 604 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 RUNX1T1Q06455 604 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 TRA2AQ13595 282 aaKnown RBP eCLIP4.48□□□□□ -1.693e-12■■■■□ 21.5
SMARCA5-202ENST00000508573 RCN2Q14257 317 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 MEP1BQ16820 701 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 SUPT20HL1Q3ZLR7 823 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 TRIM60Q495X7 471 aa4.48□□□□□ -1.69
SMARCA5-202ENST00000508573 CCDC40Q4G0X9 1142 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms